Experiment: D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS03365 and AZOBR_RS03370 are separated by 6 nucleotides AZOBR_RS03370 and AZOBR_RS03375 are separated by 13 nucleotides
AZOBR_RS03365: AZOBR_RS03365 - glycosyl transferase, at 712,918 to 714,189
_RS03365
AZOBR_RS03370: AZOBR_RS03370 - GDP-L-fucose synthase, at 714,196 to 715,176
_RS03370
AZOBR_RS03375: AZOBR_RS03375 - NAD-dependent dehydratase, at 715,190 to 716,191
_RS03375
Position (kb) 714
715
716 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 713.463 kb on - strand, within AZOBR_RS03365 at 713.972 kb on + strand, within AZOBR_RS03365 at 713.972 kb on + strand, within AZOBR_RS03365 at 713.972 kb on + strand, within AZOBR_RS03365 at 713.973 kb on - strand, within AZOBR_RS03365 at 713.973 kb on - strand, within AZOBR_RS03365 at 713.973 kb on - strand, within AZOBR_RS03365 at 714.092 kb on + strand at 714.092 kb on + strand at 714.092 kb on + strand at 714.092 kb on + strand at 714.093 kb on - strand at 714.275 kb on + strand at 714.276 kb on - strand at 714.405 kb on - strand, within AZOBR_RS03370 at 714.491 kb on + strand, within AZOBR_RS03370 at 714.491 kb on + strand, within AZOBR_RS03370 at 714.492 kb on - strand, within AZOBR_RS03370 at 714.492 kb on - strand, within AZOBR_RS03370 at 714.537 kb on - strand, within AZOBR_RS03370 at 714.674 kb on + strand, within AZOBR_RS03370 at 714.674 kb on + strand, within AZOBR_RS03370 at 714.767 kb on + strand, within AZOBR_RS03370 at 714.768 kb on - strand, within AZOBR_RS03370 at 715.001 kb on + strand, within AZOBR_RS03370 at 715.001 kb on + strand, within AZOBR_RS03370 at 715.002 kb on - strand, within AZOBR_RS03370 at 715.002 kb on - strand, within AZOBR_RS03370 at 715.192 kb on - strand at 715.452 kb on + strand, within AZOBR_RS03375 at 715.452 kb on + strand, within AZOBR_RS03375 at 715.452 kb on + strand, within AZOBR_RS03375 at 715.452 kb on + strand, within AZOBR_RS03375 at 715.452 kb on + strand, within AZOBR_RS03375 at 715.452 kb on + strand, within AZOBR_RS03375 at 715.452 kb on + strand, within AZOBR_RS03375 at 715.453 kb on - strand, within AZOBR_RS03375 at 715.453 kb on - strand, within AZOBR_RS03375 at 715.453 kb on - strand, within AZOBR_RS03375 at 715.453 kb on - strand, within AZOBR_RS03375 at 715.651 kb on - strand, within AZOBR_RS03375 at 715.743 kb on + strand, within AZOBR_RS03375 at 715.750 kb on - strand, within AZOBR_RS03375 at 715.822 kb on - strand, within AZOBR_RS03375 at 715.936 kb on - strand, within AZOBR_RS03375 at 715.936 kb on - strand, within AZOBR_RS03375 at 715.936 kb on - strand, within AZOBR_RS03375
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.125 mg/ml remove 713,463 - AZOBR_RS03365 0.43 -3.9 713,972 + AZOBR_RS03365 0.83 -1.4 713,972 + AZOBR_RS03365 0.83 -0.3 713,972 + AZOBR_RS03365 0.83 +1.0 713,973 - AZOBR_RS03365 0.83 -1.5 713,973 - AZOBR_RS03365 0.83 +0.4 713,973 - AZOBR_RS03365 0.83 +0.3 714,092 + -0.2 714,092 + -1.0 714,092 + -0.3 714,092 + -0.6 714,093 - +1.2 714,275 + +0.5 714,276 - -4.0 714,405 - AZOBR_RS03370 0.21 +0.3 714,491 + AZOBR_RS03370 0.30 +1.1 714,491 + AZOBR_RS03370 0.30 +0.6 714,492 - AZOBR_RS03370 0.30 -0.2 714,492 - AZOBR_RS03370 0.30 +0.5 714,537 - AZOBR_RS03370 0.35 +0.1 714,674 + AZOBR_RS03370 0.49 +1.6 714,674 + AZOBR_RS03370 0.49 -0.1 714,767 + AZOBR_RS03370 0.58 -1.3 714,768 - AZOBR_RS03370 0.58 -0.6 715,001 + AZOBR_RS03370 0.82 -0.2 715,001 + AZOBR_RS03370 0.82 -1.2 715,002 - AZOBR_RS03370 0.82 +0.2 715,002 - AZOBR_RS03370 0.82 +1.3 715,192 - -2.9 715,452 + AZOBR_RS03375 0.26 -0.2 715,452 + AZOBR_RS03375 0.26 -1.4 715,452 + AZOBR_RS03375 0.26 +0.1 715,452 + AZOBR_RS03375 0.26 +0.4 715,452 + AZOBR_RS03375 0.26 +2.1 715,452 + AZOBR_RS03375 0.26 -3.2 715,452 + AZOBR_RS03375 0.26 -0.1 715,453 - AZOBR_RS03375 0.26 -0.6 715,453 - AZOBR_RS03375 0.26 +3.3 715,453 - AZOBR_RS03375 0.26 +0.6 715,453 - AZOBR_RS03375 0.26 +0.3 715,651 - AZOBR_RS03375 0.46 -0.2 715,743 + AZOBR_RS03375 0.55 -0.9 715,750 - AZOBR_RS03375 0.56 +0.4 715,822 - AZOBR_RS03375 0.63 +0.4 715,936 - AZOBR_RS03375 0.74 -0.8 715,936 - AZOBR_RS03375 0.74 +1.1 715,936 - AZOBR_RS03375 0.74 +1.5
Or see this region's nucleotide sequence