Experiment: D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS03155 and AZOBR_RS03160 are separated by 104 nucleotides AZOBR_RS03160 and AZOBR_RS03165 are separated by 66 nucleotides
AZOBR_RS03155: AZOBR_RS03155 - iron ABC transporter permease, at 671,948 to 673,672
_RS03155
AZOBR_RS03160: AZOBR_RS03160 - pirin, at 673,777 to 674,625
_RS03160
AZOBR_RS03165: AZOBR_RS03165 - iron deficiency-induced protein A, at 674,692 to 675,720
_RS03165
Position (kb) 673
674
675 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 673.738 kb on + strand at 673.739 kb on - strand at 673.739 kb on - strand at 673.739 kb on - strand at 673.912 kb on + strand, within AZOBR_RS03160 at 673.912 kb on + strand, within AZOBR_RS03160 at 673.940 kb on - strand, within AZOBR_RS03160 at 673.990 kb on + strand, within AZOBR_RS03160 at 673.990 kb on + strand, within AZOBR_RS03160 at 673.990 kb on + strand, within AZOBR_RS03160 at 673.990 kb on + strand, within AZOBR_RS03160 at 673.990 kb on + strand, within AZOBR_RS03160 at 673.991 kb on - strand, within AZOBR_RS03160 at 673.991 kb on - strand, within AZOBR_RS03160 at 673.991 kb on - strand, within AZOBR_RS03160 at 673.991 kb on - strand, within AZOBR_RS03160 at 673.991 kb on - strand, within AZOBR_RS03160 at 674.185 kb on + strand, within AZOBR_RS03160 at 674.186 kb on - strand, within AZOBR_RS03160 at 674.315 kb on - strand, within AZOBR_RS03160 at 674.596 kb on + strand at 674.597 kb on - strand at 674.837 kb on + strand, within AZOBR_RS03165 at 674.838 kb on - strand, within AZOBR_RS03165 at 675.050 kb on + strand, within AZOBR_RS03165 at 675.050 kb on + strand, within AZOBR_RS03165 at 675.051 kb on - strand, within AZOBR_RS03165 at 675.051 kb on - strand, within AZOBR_RS03165 at 675.053 kb on + strand, within AZOBR_RS03165 at 675.053 kb on + strand, within AZOBR_RS03165 at 675.053 kb on + strand, within AZOBR_RS03165 at 675.054 kb on - strand at 675.054 kb on - strand, within AZOBR_RS03165 at 675.221 kb on + strand, within AZOBR_RS03165 at 675.221 kb on + strand, within AZOBR_RS03165 at 675.221 kb on + strand, within AZOBR_RS03165 at 675.222 kb on - strand, within AZOBR_RS03165 at 675.284 kb on + strand, within AZOBR_RS03165 at 675.285 kb on - strand, within AZOBR_RS03165 at 675.323 kb on + strand, within AZOBR_RS03165 at 675.323 kb on + strand, within AZOBR_RS03165 at 675.590 kb on + strand, within AZOBR_RS03165 at 675.611 kb on + strand, within AZOBR_RS03165
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.125 mg/ml remove 673,738 + +0.1 673,739 - +0.9 673,739 - +0.1 673,739 - -1.1 673,912 + AZOBR_RS03160 0.16 -3.2 673,912 + AZOBR_RS03160 0.16 +0.6 673,940 - AZOBR_RS03160 0.19 -1.0 673,990 + AZOBR_RS03160 0.25 -0.1 673,990 + AZOBR_RS03160 0.25 -2.3 673,990 + AZOBR_RS03160 0.25 +0.3 673,990 + AZOBR_RS03160 0.25 +1.4 673,990 + AZOBR_RS03160 0.25 -0.5 673,991 - AZOBR_RS03160 0.25 -0.1 673,991 - AZOBR_RS03160 0.25 +0.1 673,991 - AZOBR_RS03160 0.25 +1.2 673,991 - AZOBR_RS03160 0.25 -0.4 673,991 - AZOBR_RS03160 0.25 +0.9 674,185 + AZOBR_RS03160 0.48 -4.8 674,186 - AZOBR_RS03160 0.48 +2.2 674,315 - AZOBR_RS03160 0.63 +0.7 674,596 + -0.3 674,597 - -0.6 674,837 + AZOBR_RS03165 0.14 +0.7 674,838 - AZOBR_RS03165 0.14 +0.1 675,050 + AZOBR_RS03165 0.35 +1.0 675,050 + AZOBR_RS03165 0.35 -1.2 675,051 - AZOBR_RS03165 0.35 -0.6 675,051 - AZOBR_RS03165 0.35 -0.2 675,053 + AZOBR_RS03165 0.35 +1.1 675,053 + AZOBR_RS03165 0.35 +0.8 675,053 + AZOBR_RS03165 0.35 +0.1 675,054 - -1.8 675,054 - AZOBR_RS03165 0.35 -3.0 675,221 + AZOBR_RS03165 0.51 +1.8 675,221 + AZOBR_RS03165 0.51 -2.6 675,221 + AZOBR_RS03165 0.51 -1.4 675,222 - AZOBR_RS03165 0.52 +0.1 675,284 + AZOBR_RS03165 0.58 +0.1 675,285 - AZOBR_RS03165 0.58 -0.1 675,323 + AZOBR_RS03165 0.61 -1.2 675,323 + AZOBR_RS03165 0.61 +0.0 675,590 + AZOBR_RS03165 0.87 -1.7 675,611 + AZOBR_RS03165 0.89 -0.8
Or see this region's nucleotide sequence