Experiment: D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS03145 and AZOBR_RS03150 are separated by 147 nucleotides AZOBR_RS03150 and AZOBR_RS03155 are separated by 131 nucleotides AZOBR_RS03155 and AZOBR_RS03160 are separated by 104 nucleotides
AZOBR_RS03145: AZOBR_RS03145 - diguanylate cyclase, at 670,143 to 671,018
_RS03145
AZOBR_RS03150: AZOBR_RS03150 - uracil phosphoribosyltransferase, at 671,166 to 671,816
_RS03150
AZOBR_RS03155: AZOBR_RS03155 - iron ABC transporter permease, at 671,948 to 673,672
_RS03155
AZOBR_RS03160: AZOBR_RS03160 - pirin, at 673,777 to 674,625
_RS03160
Position (kb) 671
672
673
674 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 670.959 kb on + strand at 671.308 kb on - strand, within AZOBR_RS03150 at 671.308 kb on - strand, within AZOBR_RS03150 at 671.887 kb on - strand at 671.940 kb on - strand at 672.336 kb on - strand, within AZOBR_RS03155 at 672.482 kb on + strand, within AZOBR_RS03155 at 672.488 kb on + strand, within AZOBR_RS03155 at 672.489 kb on - strand, within AZOBR_RS03155 at 672.547 kb on + strand, within AZOBR_RS03155 at 672.704 kb on + strand, within AZOBR_RS03155 at 672.704 kb on + strand, within AZOBR_RS03155 at 673.738 kb on + strand at 673.739 kb on - strand at 673.739 kb on - strand at 673.739 kb on - strand at 673.912 kb on + strand, within AZOBR_RS03160 at 673.912 kb on + strand, within AZOBR_RS03160 at 673.940 kb on - strand, within AZOBR_RS03160 at 673.990 kb on + strand, within AZOBR_RS03160 at 673.990 kb on + strand, within AZOBR_RS03160 at 673.990 kb on + strand, within AZOBR_RS03160 at 673.990 kb on + strand, within AZOBR_RS03160 at 673.990 kb on + strand, within AZOBR_RS03160 at 673.991 kb on - strand, within AZOBR_RS03160 at 673.991 kb on - strand, within AZOBR_RS03160 at 673.991 kb on - strand, within AZOBR_RS03160 at 673.991 kb on - strand, within AZOBR_RS03160 at 673.991 kb on - strand, within AZOBR_RS03160 at 674.185 kb on + strand, within AZOBR_RS03160 at 674.186 kb on - strand, within AZOBR_RS03160 at 674.315 kb on - strand, within AZOBR_RS03160 at 674.596 kb on + strand at 674.597 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.125 mg/ml remove 670,959 + +0.2 671,308 - AZOBR_RS03150 0.22 -3.4 671,308 - AZOBR_RS03150 0.22 -2.8 671,887 - -1.7 671,940 - +0.2 672,336 - AZOBR_RS03155 0.22 +0.6 672,482 + AZOBR_RS03155 0.31 +1.9 672,488 + AZOBR_RS03155 0.31 -0.6 672,489 - AZOBR_RS03155 0.31 -0.1 672,547 + AZOBR_RS03155 0.35 -3.2 672,704 + AZOBR_RS03155 0.44 +0.3 672,704 + AZOBR_RS03155 0.44 +1.0 673,738 + +0.1 673,739 - +0.9 673,739 - +0.1 673,739 - -1.1 673,912 + AZOBR_RS03160 0.16 -3.2 673,912 + AZOBR_RS03160 0.16 +0.6 673,940 - AZOBR_RS03160 0.19 -1.0 673,990 + AZOBR_RS03160 0.25 -0.1 673,990 + AZOBR_RS03160 0.25 -2.3 673,990 + AZOBR_RS03160 0.25 +0.3 673,990 + AZOBR_RS03160 0.25 +1.4 673,990 + AZOBR_RS03160 0.25 -0.5 673,991 - AZOBR_RS03160 0.25 -0.1 673,991 - AZOBR_RS03160 0.25 +0.1 673,991 - AZOBR_RS03160 0.25 +1.2 673,991 - AZOBR_RS03160 0.25 -0.4 673,991 - AZOBR_RS03160 0.25 +0.9 674,185 + AZOBR_RS03160 0.48 -4.8 674,186 - AZOBR_RS03160 0.48 +2.2 674,315 - AZOBR_RS03160 0.63 +0.7 674,596 + -0.3 674,597 - -0.6
Or see this region's nucleotide sequence