Experiment: D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS02975 and AZOBR_RS02980 are separated by 7 nucleotides AZOBR_RS02980 and AZOBR_RS02985 are separated by 248 nucleotides
AZOBR_RS02975: AZOBR_RS02975 - hypothetical protein, at 630,941 to 631,960
_RS02975
AZOBR_RS02980: AZOBR_RS02980 - ABC transporter permease, at 631,968 to 633,296
_RS02980
AZOBR_RS02985: AZOBR_RS02985 - aconitate hydratase, at 633,545 to 636,235
_RS02985
Position (kb) 631
632
633
634 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 631.020 kb on - strand at 631.379 kb on + strand, within AZOBR_RS02975 at 631.379 kb on + strand, within AZOBR_RS02975 at 631.379 kb on + strand, within AZOBR_RS02975 at 631.380 kb on - strand, within AZOBR_RS02975 at 631.380 kb on - strand, within AZOBR_RS02975 at 631.380 kb on - strand, within AZOBR_RS02975 at 631.380 kb on - strand, within AZOBR_RS02975 at 631.700 kb on + strand, within AZOBR_RS02975 at 631.701 kb on - strand, within AZOBR_RS02975 at 632.162 kb on + strand, within AZOBR_RS02980 at 632.162 kb on + strand, within AZOBR_RS02980 at 632.162 kb on + strand, within AZOBR_RS02980 at 632.163 kb on - strand, within AZOBR_RS02980 at 632.323 kb on + strand, within AZOBR_RS02980 at 632.443 kb on + strand, within AZOBR_RS02980 at 632.443 kb on + strand, within AZOBR_RS02980 at 632.444 kb on - strand, within AZOBR_RS02980 at 632.444 kb on - strand, within AZOBR_RS02980 at 632.743 kb on + strand, within AZOBR_RS02980 at 632.743 kb on + strand, within AZOBR_RS02980 at 632.744 kb on - strand, within AZOBR_RS02980 at 632.750 kb on - strand, within AZOBR_RS02980 at 632.750 kb on - strand, within AZOBR_RS02980 at 632.750 kb on - strand, within AZOBR_RS02980 at 632.750 kb on - strand, within AZOBR_RS02980 at 632.833 kb on + strand, within AZOBR_RS02980 at 632.834 kb on - strand, within AZOBR_RS02980 at 632.834 kb on - strand, within AZOBR_RS02980 at 632.950 kb on + strand, within AZOBR_RS02980 at 632.950 kb on + strand, within AZOBR_RS02980 at 632.950 kb on + strand, within AZOBR_RS02980 at 632.950 kb on + strand, within AZOBR_RS02980 at 632.950 kb on + strand, within AZOBR_RS02980 at 632.950 kb on + strand, within AZOBR_RS02980 at 632.950 kb on + strand, within AZOBR_RS02980 at 632.951 kb on - strand, within AZOBR_RS02980 at 633.020 kb on - strand, within AZOBR_RS02980 at 633.046 kb on + strand, within AZOBR_RS02980 at 633.047 kb on - strand, within AZOBR_RS02980 at 633.047 kb on - strand, within AZOBR_RS02980 at 633.121 kb on + strand, within AZOBR_RS02980 at 633.122 kb on - strand, within AZOBR_RS02980 at 633.366 kb on + strand at 633.367 kb on - strand at 633.370 kb on - strand at 633.468 kb on + strand at 633.469 kb on - strand at 633.611 kb on + strand at 633.612 kb on - strand at 633.618 kb on - strand at 633.675 kb on - strand at 633.960 kb on - strand, within AZOBR_RS02985 at 634.115 kb on + strand, within AZOBR_RS02985 at 634.115 kb on + strand, within AZOBR_RS02985
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.125 mg/ml remove 631,020 - +0.4 631,379 + AZOBR_RS02975 0.43 -2.2 631,379 + AZOBR_RS02975 0.43 -1.1 631,379 + AZOBR_RS02975 0.43 -1.3 631,380 - AZOBR_RS02975 0.43 +0.9 631,380 - AZOBR_RS02975 0.43 +0.3 631,380 - AZOBR_RS02975 0.43 +0.7 631,380 - AZOBR_RS02975 0.43 -0.3 631,700 + AZOBR_RS02975 0.74 -2.7 631,701 - AZOBR_RS02975 0.75 +0.2 632,162 + AZOBR_RS02980 0.15 -0.7 632,162 + AZOBR_RS02980 0.15 +0.1 632,162 + AZOBR_RS02980 0.15 -0.6 632,163 - AZOBR_RS02980 0.15 -0.2 632,323 + AZOBR_RS02980 0.27 +0.5 632,443 + AZOBR_RS02980 0.36 +1.0 632,443 + AZOBR_RS02980 0.36 -0.1 632,444 - AZOBR_RS02980 0.36 -2.4 632,444 - AZOBR_RS02980 0.36 +0.2 632,743 + AZOBR_RS02980 0.58 -2.7 632,743 + AZOBR_RS02980 0.58 +0.3 632,744 - AZOBR_RS02980 0.58 +1.0 632,750 - AZOBR_RS02980 0.59 +0.6 632,750 - AZOBR_RS02980 0.59 +0.8 632,750 - AZOBR_RS02980 0.59 -0.3 632,750 - AZOBR_RS02980 0.59 -0.4 632,833 + AZOBR_RS02980 0.65 -2.0 632,834 - AZOBR_RS02980 0.65 -0.8 632,834 - AZOBR_RS02980 0.65 -4.9 632,950 + AZOBR_RS02980 0.74 -3.7 632,950 + AZOBR_RS02980 0.74 +0.5 632,950 + AZOBR_RS02980 0.74 -0.1 632,950 + AZOBR_RS02980 0.74 -3.0 632,950 + AZOBR_RS02980 0.74 -2.0 632,950 + AZOBR_RS02980 0.74 -0.6 632,950 + AZOBR_RS02980 0.74 -0.1 632,951 - AZOBR_RS02980 0.74 +0.9 633,020 - AZOBR_RS02980 0.79 -0.0 633,046 + AZOBR_RS02980 0.81 +0.2 633,047 - AZOBR_RS02980 0.81 +0.9 633,047 - AZOBR_RS02980 0.81 +0.5 633,121 + AZOBR_RS02980 0.87 +0.5 633,122 - AZOBR_RS02980 0.87 -2.2 633,366 + +0.3 633,367 - +0.2 633,370 - +0.7 633,468 + -3.1 633,469 - +1.7 633,611 + -0.4 633,612 - +0.6 633,618 - +0.4 633,675 - -0.4 633,960 - AZOBR_RS02985 0.15 +0.8 634,115 + AZOBR_RS02985 0.21 +1.0 634,115 + AZOBR_RS02985 0.21 +0.1
Or see this region's nucleotide sequence