Experiment: D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS02315 and AZOBR_RS02320 are separated by 168 nucleotides AZOBR_RS02320 and AZOBR_RS02325 are separated by 88 nucleotides
AZOBR_RS02315: AZOBR_RS02315 - ATPase AAA, at 477,514 to 479,046
_RS02315
AZOBR_RS02320: AZOBR_RS02320 - amidase, at 479,215 to 479,961
_RS02320
AZOBR_RS02325: AZOBR_RS02325 - ABC transporter substrate-binding protein, at 480,050 to 481,561
_RS02325
Position (kb) 479
480 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 479.083 kb on - strand at 479.254 kb on + strand at 479.254 kb on + strand at 479.255 kb on - strand at 479.488 kb on + strand, within AZOBR_RS02320 at 479.488 kb on + strand, within AZOBR_RS02320 at 479.488 kb on + strand, within AZOBR_RS02320 at 479.488 kb on + strand, within AZOBR_RS02320 at 479.489 kb on - strand, within AZOBR_RS02320 at 479.489 kb on - strand, within AZOBR_RS02320 at 479.489 kb on - strand, within AZOBR_RS02320 at 479.578 kb on + strand, within AZOBR_RS02320 at 479.579 kb on - strand, within AZOBR_RS02320 at 479.587 kb on + strand, within AZOBR_RS02320 at 479.746 kb on + strand, within AZOBR_RS02320 at 479.746 kb on + strand, within AZOBR_RS02320 at 479.746 kb on + strand, within AZOBR_RS02320 at 479.747 kb on - strand, within AZOBR_RS02320 at 479.747 kb on - strand, within AZOBR_RS02320 at 479.747 kb on - strand, within AZOBR_RS02320 at 479.812 kb on + strand, within AZOBR_RS02320 at 479.813 kb on - strand, within AZOBR_RS02320 at 479.935 kb on + strand at 479.936 kb on - strand at 480.242 kb on + strand, within AZOBR_RS02325 at 480.242 kb on + strand, within AZOBR_RS02325 at 480.242 kb on + strand, within AZOBR_RS02325 at 480.242 kb on + strand, within AZOBR_RS02325 at 480.243 kb on - strand, within AZOBR_RS02325 at 480.243 kb on - strand, within AZOBR_RS02325 at 480.254 kb on + strand, within AZOBR_RS02325 at 480.254 kb on + strand, within AZOBR_RS02325 at 480.341 kb on + strand, within AZOBR_RS02325 at 480.341 kb on + strand, within AZOBR_RS02325 at 480.341 kb on + strand, within AZOBR_RS02325 at 480.342 kb on - strand, within AZOBR_RS02325 at 480.461 kb on + strand, within AZOBR_RS02325 at 480.462 kb on - strand, within AZOBR_RS02325 at 480.462 kb on - strand, within AZOBR_RS02325 at 480.686 kb on + strand, within AZOBR_RS02325 at 480.686 kb on + strand, within AZOBR_RS02325 at 480.686 kb on + strand, within AZOBR_RS02325 at 480.803 kb on + strand, within AZOBR_RS02325 at 480.804 kb on - strand, within AZOBR_RS02325 at 480.804 kb on - strand, within AZOBR_RS02325
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.125 mg/ml remove 479,083 - +1.0 479,254 + -2.0 479,254 + +0.5 479,255 - +0.0 479,488 + AZOBR_RS02320 0.37 +0.5 479,488 + AZOBR_RS02320 0.37 +0.3 479,488 + AZOBR_RS02320 0.37 +0.8 479,488 + AZOBR_RS02320 0.37 -1.5 479,489 - AZOBR_RS02320 0.37 -0.1 479,489 - AZOBR_RS02320 0.37 -1.2 479,489 - AZOBR_RS02320 0.37 -0.4 479,578 + AZOBR_RS02320 0.49 -3.7 479,579 - AZOBR_RS02320 0.49 +1.2 479,587 + AZOBR_RS02320 0.50 +0.0 479,746 + AZOBR_RS02320 0.71 +0.3 479,746 + AZOBR_RS02320 0.71 +0.9 479,746 + AZOBR_RS02320 0.71 +0.0 479,747 - AZOBR_RS02320 0.71 -2.3 479,747 - AZOBR_RS02320 0.71 +0.7 479,747 - AZOBR_RS02320 0.71 -0.2 479,812 + AZOBR_RS02320 0.80 -1.1 479,813 - AZOBR_RS02320 0.80 +1.1 479,935 + +0.6 479,936 - -0.2 480,242 + AZOBR_RS02325 0.13 +0.3 480,242 + AZOBR_RS02325 0.13 -0.3 480,242 + AZOBR_RS02325 0.13 -1.4 480,242 + AZOBR_RS02325 0.13 +2.4 480,243 - AZOBR_RS02325 0.13 -0.9 480,243 - AZOBR_RS02325 0.13 +0.1 480,254 + AZOBR_RS02325 0.13 -0.6 480,254 + AZOBR_RS02325 0.13 +0.8 480,341 + AZOBR_RS02325 0.19 +0.6 480,341 + AZOBR_RS02325 0.19 -4.2 480,341 + AZOBR_RS02325 0.19 +1.2 480,342 - AZOBR_RS02325 0.19 -0.4 480,461 + AZOBR_RS02325 0.27 -0.2 480,462 - AZOBR_RS02325 0.27 +0.2 480,462 - AZOBR_RS02325 0.27 -3.9 480,686 + AZOBR_RS02325 0.42 +0.2 480,686 + AZOBR_RS02325 0.42 -1.0 480,686 + AZOBR_RS02325 0.42 -4.1 480,803 + AZOBR_RS02325 0.50 -0.0 480,804 - AZOBR_RS02325 0.50 -4.0 480,804 - AZOBR_RS02325 0.50 +0.2
Or see this region's nucleotide sequence