Experiment: D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS02150 and AZOBR_RS02155 are separated by 98 nucleotides AZOBR_RS02155 and AZOBR_RS02160 overlap by 4 nucleotides AZOBR_RS02160 and AZOBR_RS02165 are separated by 33 nucleotides
AZOBR_RS02150: AZOBR_RS02150 - ABC transporter substrate-binding protein, at 442,912 to 444,117
_RS02150
AZOBR_RS02155: AZOBR_RS02155 - 16S rRNA methyltransferase, at 444,216 to 445,037
_RS02155
AZOBR_RS02160: AZOBR_RS02160 - hypothetical protein, at 445,034 to 445,402
_RS02160
AZOBR_RS02165: AZOBR_RS02165 - hypothetical protein, at 445,436 to 446,269
_RS02165
Position (kb) 444
445
446 Strain fitness (log2 ratio) -2
-1
0
1
2 at 444.173 kb on + strand at 444.174 kb on - strand at 444.194 kb on + strand at 444.195 kb on - strand at 444.195 kb on - strand at 444.195 kb on - strand at 444.214 kb on - strand at 444.214 kb on - strand at 444.214 kb on - strand at 444.364 kb on - strand, within AZOBR_RS02155 at 444.364 kb on - strand, within AZOBR_RS02155 at 444.364 kb on - strand, within AZOBR_RS02155 at 444.364 kb on - strand, within AZOBR_RS02155 at 444.478 kb on - strand, within AZOBR_RS02155 at 444.817 kb on - strand, within AZOBR_RS02155 at 444.996 kb on + strand at 444.996 kb on + strand at 445.295 kb on + strand, within AZOBR_RS02160 at 445.295 kb on + strand at 445.295 kb on + strand, within AZOBR_RS02160 at 445.295 kb on + strand, within AZOBR_RS02160 at 445.296 kb on - strand at 445.325 kb on + strand, within AZOBR_RS02160 at 445.326 kb on - strand, within AZOBR_RS02160 at 445.683 kb on - strand, within AZOBR_RS02165 at 445.704 kb on - strand, within AZOBR_RS02165 at 445.704 kb on - strand, within AZOBR_RS02165 at 445.781 kb on + strand, within AZOBR_RS02165 at 445.781 kb on + strand, within AZOBR_RS02165 at 445.781 kb on + strand, within AZOBR_RS02165 at 445.782 kb on - strand, within AZOBR_RS02165 at 445.782 kb on - strand, within AZOBR_RS02165
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.125 mg/ml remove 444,173 + -0.4 444,174 - -2.3 444,194 + -1.7 444,195 - +0.0 444,195 - -1.7 444,195 - +0.4 444,214 - -1.9 444,214 - +1.4 444,214 - -1.6 444,364 - AZOBR_RS02155 0.18 -1.0 444,364 - AZOBR_RS02155 0.18 -1.1 444,364 - AZOBR_RS02155 0.18 -0.1 444,364 - AZOBR_RS02155 0.18 -1.3 444,478 - AZOBR_RS02155 0.32 -1.8 444,817 - AZOBR_RS02155 0.73 -1.4 444,996 + -2.0 444,996 + +0.3 445,295 + AZOBR_RS02160 0.71 +0.7 445,295 + -0.2 445,295 + AZOBR_RS02160 0.71 -1.2 445,295 + AZOBR_RS02160 0.71 +1.4 445,296 - +0.3 445,325 + AZOBR_RS02160 0.79 +1.3 445,326 - AZOBR_RS02160 0.79 +0.1 445,683 - AZOBR_RS02165 0.30 +1.9 445,704 - AZOBR_RS02165 0.32 +1.8 445,704 - AZOBR_RS02165 0.32 +1.7 445,781 + AZOBR_RS02165 0.41 -1.2 445,781 + AZOBR_RS02165 0.41 +0.7 445,781 + AZOBR_RS02165 0.41 +0.9 445,782 - AZOBR_RS02165 0.41 +1.9 445,782 - AZOBR_RS02165 0.41 +0.9
Or see this region's nucleotide sequence