Experiment: D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS02100 and AZOBR_RS02105 are separated by 681 nucleotides AZOBR_RS02105 and AZOBR_RS02110 are separated by 22 nucleotides
AZOBR_RS02100: AZOBR_RS02100 - pirin, at 430,508 to 431,440
_RS02100
AZOBR_RS02105: AZOBR_RS02105 - hypothetical protein, at 432,122 to 432,700
_RS02105
AZOBR_RS02110: AZOBR_RS02110 - protein-PII uridylyltransferase, at 432,723 to 435,524
_RS02110
Position (kb) 432
433 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 431.127 kb on + strand, within AZOBR_RS02100 at 431.304 kb on + strand, within AZOBR_RS02100 at 431.304 kb on + strand, within AZOBR_RS02100 at 431.304 kb on + strand, within AZOBR_RS02100 at 431.304 kb on + strand, within AZOBR_RS02100 at 431.305 kb on - strand, within AZOBR_RS02100 at 431.440 kb on + strand at 431.440 kb on + strand at 431.441 kb on - strand at 431.441 kb on - strand at 431.516 kb on + strand at 431.516 kb on + strand at 431.527 kb on + strand at 431.528 kb on - strand at 431.542 kb on - strand at 431.549 kb on - strand at 431.549 kb on - strand at 431.659 kb on + strand at 431.659 kb on + strand at 431.660 kb on - strand at 431.832 kb on + strand at 431.833 kb on + strand at 431.833 kb on - strand at 431.837 kb on - strand at 431.837 kb on - strand at 431.932 kb on + strand at 432.074 kb on - strand at 432.617 kb on + strand, within AZOBR_RS02105 at 432.702 kb on - strand at 432.702 kb on - strand at 432.820 kb on + strand at 432.820 kb on + strand at 432.820 kb on + strand at 432.821 kb on - strand at 432.821 kb on - strand at 432.821 kb on - strand at 432.821 kb on - strand at 432.821 kb on - strand at 432.910 kb on + strand at 433.408 kb on + strand, within AZOBR_RS02110 at 433.409 kb on - strand, within AZOBR_RS02110 at 433.558 kb on + strand, within AZOBR_RS02110 at 433.558 kb on + strand, within AZOBR_RS02110 at 433.559 kb on - strand, within AZOBR_RS02110
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.125 mg/ml remove 431,127 + AZOBR_RS02100 0.66 +1.3 431,304 + AZOBR_RS02100 0.85 +0.3 431,304 + AZOBR_RS02100 0.85 -0.8 431,304 + AZOBR_RS02100 0.85 -0.4 431,304 + AZOBR_RS02100 0.85 -3.2 431,305 - AZOBR_RS02100 0.85 -0.5 431,440 + +0.6 431,440 + -1.5 431,441 - +0.3 431,441 - -0.1 431,516 + +1.1 431,516 + -0.6 431,527 + +1.7 431,528 - -3.1 431,542 - -2.5 431,549 - -0.9 431,549 - -0.5 431,659 + +0.4 431,659 + +0.7 431,660 - -1.7 431,832 + +1.3 431,833 + -1.2 431,833 - -0.8 431,837 - +0.2 431,837 - -2.6 431,932 + -4.1 432,074 - -1.9 432,617 + AZOBR_RS02105 0.85 -1.8 432,702 - -0.2 432,702 - +0.9 432,820 + -2.3 432,820 + -0.2 432,820 + -2.1 432,821 - -0.4 432,821 - -0.1 432,821 - -1.3 432,821 - -0.8 432,821 - -1.3 432,910 + -0.1 433,408 + AZOBR_RS02110 0.24 -2.0 433,409 - AZOBR_RS02110 0.24 -2.5 433,558 + AZOBR_RS02110 0.30 +0.1 433,558 + AZOBR_RS02110 0.30 -0.9 433,559 - AZOBR_RS02110 0.30 +0.2
Or see this region's nucleotide sequence