Experiment: D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS01705 and AZOBR_RS01710 are separated by 13 nucleotides AZOBR_RS01710 and AZOBR_RS01715 are separated by 242 nucleotides AZOBR_RS01715 and AZOBR_RS01720 are separated by 217 nucleotides
AZOBR_RS01705: AZOBR_RS01705 - murein transglycosylase, at 347,605 to 348,810
_RS01705
AZOBR_RS01710: AZOBR_RS01710 - translocase, at 348,824 to 349,498
_RS01710
AZOBR_RS01715: AZOBR_RS01715 - exlusion protein FxsA, at 349,741 to 350,241
_RS01715
AZOBR_RS01720: AZOBR_RS01720 - preprotein translocase subunit SecB, at 350,459 to 350,956
_RS01720
Position (kb) 348
349
350 Strain fitness (log2 ratio) -2
-1
0
1
2 at 347.927 kb on + strand, within AZOBR_RS01705 at 347.928 kb on - strand, within AZOBR_RS01705 at 347.928 kb on - strand, within AZOBR_RS01705 at 347.928 kb on - strand, within AZOBR_RS01705 at 347.928 kb on - strand, within AZOBR_RS01705 at 347.928 kb on - strand at 347.928 kb on - strand, within AZOBR_RS01705 at 348.059 kb on + strand, within AZOBR_RS01705 at 348.059 kb on + strand, within AZOBR_RS01705 at 348.059 kb on + strand, within AZOBR_RS01705 at 348.059 kb on + strand, within AZOBR_RS01705 at 348.059 kb on + strand, within AZOBR_RS01705 at 348.060 kb on - strand, within AZOBR_RS01705 at 348.060 kb on - strand, within AZOBR_RS01705 at 348.060 kb on - strand, within AZOBR_RS01705 at 348.060 kb on - strand, within AZOBR_RS01705 at 348.339 kb on - strand, within AZOBR_RS01705 at 348.339 kb on - strand, within AZOBR_RS01705 at 348.339 kb on - strand, within AZOBR_RS01705 at 348.339 kb on - strand, within AZOBR_RS01705 at 348.444 kb on - strand, within AZOBR_RS01705 at 349.219 kb on - strand, within AZOBR_RS01710 at 349.559 kb on + strand at 349.559 kb on + strand at 349.585 kb on + strand at 349.585 kb on + strand at 349.585 kb on + strand at 349.586 kb on - strand at 349.586 kb on - strand at 349.586 kb on - strand at 349.586 kb on - strand at 349.704 kb on + strand at 349.705 kb on - strand at 349.705 kb on - strand at 349.705 kb on - strand at 349.708 kb on + strand at 350.082 kb on + strand, within AZOBR_RS01715 at 350.083 kb on - strand, within AZOBR_RS01715 at 350.083 kb on - strand, within AZOBR_RS01715 at 350.222 kb on - strand at 350.399 kb on + strand at 350.400 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.125 mg/ml remove 347,927 + AZOBR_RS01705 0.27 +1.6 347,928 - AZOBR_RS01705 0.27 -1.3 347,928 - AZOBR_RS01705 0.27 -2.5 347,928 - AZOBR_RS01705 0.27 +0.8 347,928 - AZOBR_RS01705 0.27 -2.5 347,928 - -1.2 347,928 - AZOBR_RS01705 0.27 -1.2 348,059 + AZOBR_RS01705 0.38 -0.1 348,059 + AZOBR_RS01705 0.38 -2.6 348,059 + AZOBR_RS01705 0.38 +1.0 348,059 + AZOBR_RS01705 0.38 -0.2 348,059 + AZOBR_RS01705 0.38 +0.2 348,060 - AZOBR_RS01705 0.38 +2.3 348,060 - AZOBR_RS01705 0.38 -0.9 348,060 - AZOBR_RS01705 0.38 +0.3 348,060 - AZOBR_RS01705 0.38 -2.3 348,339 - AZOBR_RS01705 0.61 -0.1 348,339 - AZOBR_RS01705 0.61 -0.1 348,339 - AZOBR_RS01705 0.61 -0.9 348,339 - AZOBR_RS01705 0.61 +0.4 348,444 - AZOBR_RS01705 0.70 +0.4 349,219 - AZOBR_RS01710 0.59 +0.0 349,559 + +0.2 349,559 + +0.8 349,585 + +1.0 349,585 + +0.5 349,585 + +0.9 349,586 - -0.0 349,586 - +0.4 349,586 - +1.2 349,586 - +1.0 349,704 + +2.5 349,705 - -0.5 349,705 - +1.5 349,705 - +0.2 349,708 + -0.1 350,082 + AZOBR_RS01715 0.68 -2.6 350,083 - AZOBR_RS01715 0.68 +0.4 350,083 - AZOBR_RS01715 0.68 +2.6 350,222 - +0.0 350,399 + +0.2 350,400 - +2.4
Or see this region's nucleotide sequence