Experiment: D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS01560 and AZOBR_RS01565 are separated by 98 nucleotides AZOBR_RS01565 and AZOBR_RS01570 are separated by 82 nucleotides AZOBR_RS01570 and AZOBR_RS01575 are separated by 164 nucleotides
AZOBR_RS01560: AZOBR_RS01560 - hypothetical protein, at 321,012 to 321,833
_RS01560
AZOBR_RS01565: AZOBR_RS01565 - endonuclease III, at 321,932 to 322,579
_RS01565
AZOBR_RS01570: AZOBR_RS01570 - hypothetical protein, at 322,662 to 323,180
_RS01570
AZOBR_RS01575: AZOBR_RS01575 - 6-O-methylguanine DNA methyltransferase, at 323,345 to 324,169
_RS01575
Position (kb) 321
322
323 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 321.283 kb on - strand, within AZOBR_RS01560 at 321.738 kb on + strand, within AZOBR_RS01560 at 321.738 kb on + strand, within AZOBR_RS01560 at 321.739 kb on - strand, within AZOBR_RS01560 at 321.739 kb on - strand, within AZOBR_RS01560 at 321.739 kb on - strand, within AZOBR_RS01560 at 321.739 kb on - strand, within AZOBR_RS01560 at 321.739 kb on - strand, within AZOBR_RS01560 at 321.739 kb on - strand, within AZOBR_RS01560 at 321.739 kb on - strand, within AZOBR_RS01560 at 321.832 kb on - strand at 322.026 kb on + strand, within AZOBR_RS01565 at 322.027 kb on - strand, within AZOBR_RS01565 at 322.281 kb on + strand, within AZOBR_RS01565 at 322.357 kb on - strand, within AZOBR_RS01565 at 322.491 kb on + strand, within AZOBR_RS01565 at 322.503 kb on + strand, within AZOBR_RS01565 at 322.503 kb on + strand, within AZOBR_RS01565 at 322.503 kb on + strand, within AZOBR_RS01565 at 322.504 kb on - strand, within AZOBR_RS01565 at 322.504 kb on - strand, within AZOBR_RS01565 at 322.905 kb on + strand, within AZOBR_RS01570 at 322.906 kb on - strand, within AZOBR_RS01570
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.125 mg/ml remove 321,283 - AZOBR_RS01560 0.33 +2.0 321,738 + AZOBR_RS01560 0.88 +0.8 321,738 + AZOBR_RS01560 0.88 +0.3 321,739 - AZOBR_RS01560 0.88 +0.3 321,739 - AZOBR_RS01560 0.88 -0.3 321,739 - AZOBR_RS01560 0.88 -4.0 321,739 - AZOBR_RS01560 0.88 +0.5 321,739 - AZOBR_RS01560 0.88 +0.0 321,739 - AZOBR_RS01560 0.88 +0.9 321,739 - AZOBR_RS01560 0.88 -2.7 321,832 - +1.9 322,026 + AZOBR_RS01565 0.15 -0.0 322,027 - AZOBR_RS01565 0.15 -2.0 322,281 + AZOBR_RS01565 0.54 +0.8 322,357 - AZOBR_RS01565 0.66 -1.7 322,491 + AZOBR_RS01565 0.86 -3.3 322,503 + AZOBR_RS01565 0.88 -0.7 322,503 + AZOBR_RS01565 0.88 -2.9 322,503 + AZOBR_RS01565 0.88 -3.9 322,504 - AZOBR_RS01565 0.88 -1.8 322,504 - AZOBR_RS01565 0.88 -1.9 322,905 + AZOBR_RS01570 0.47 -0.2 322,906 - AZOBR_RS01570 0.47 +2.6
Or see this region's nucleotide sequence