Experiment: D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS00915 and AZOBR_RS00920 are separated by 399 nucleotides AZOBR_RS00920 and AZOBR_RS00925 are separated by 91 nucleotides
AZOBR_RS00915: AZOBR_RS00915 - nuclease, at 182,346 to 183,182
_RS00915
AZOBR_RS00920: AZOBR_RS00920 - peptidase, at 183,582 to 184,904
_RS00920
AZOBR_RS00925: AZOBR_RS00925 - guanylate cyclase, at 184,996 to 186,921
_RS00925
Position (kb) 183
184
185 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3 at 183.428 kb on + strand at 183.654 kb on + strand at 183.654 kb on + strand at 183.654 kb on + strand at 183.654 kb on + strand at 183.654 kb on + strand at 183.654 kb on + strand at 183.655 kb on - strand at 183.766 kb on - strand, within AZOBR_RS00920 at 183.766 kb on - strand, within AZOBR_RS00920 at 183.771 kb on + strand, within AZOBR_RS00920 at 183.771 kb on + strand, within AZOBR_RS00920 at 183.772 kb on - strand, within AZOBR_RS00920 at 183.772 kb on - strand, within AZOBR_RS00920 at 183.772 kb on - strand, within AZOBR_RS00920 at 184.032 kb on + strand, within AZOBR_RS00920 at 184.032 kb on + strand, within AZOBR_RS00920 at 184.032 kb on + strand, within AZOBR_RS00920 at 184.033 kb on - strand, within AZOBR_RS00920 at 184.105 kb on - strand, within AZOBR_RS00920 at 184.105 kb on - strand, within AZOBR_RS00920 at 184.245 kb on + strand, within AZOBR_RS00920 at 184.272 kb on + strand, within AZOBR_RS00920 at 184.273 kb on - strand, within AZOBR_RS00920 at 184.359 kb on + strand, within AZOBR_RS00920 at 184.359 kb on + strand, within AZOBR_RS00920 at 184.360 kb on - strand, within AZOBR_RS00920 at 184.360 kb on - strand, within AZOBR_RS00920 at 184.464 kb on + strand, within AZOBR_RS00920 at 184.464 kb on + strand, within AZOBR_RS00920 at 184.465 kb on - strand, within AZOBR_RS00920 at 184.600 kb on + strand, within AZOBR_RS00920 at 184.600 kb on + strand at 184.624 kb on - strand, within AZOBR_RS00920 at 184.731 kb on + strand, within AZOBR_RS00920 at 184.790 kb on - strand at 184.935 kb on + strand at 184.984 kb on - strand at 185.647 kb on + strand, within AZOBR_RS00925 at 185.647 kb on + strand, within AZOBR_RS00925 at 185.647 kb on + strand, within AZOBR_RS00925 at 185.648 kb on - strand, within AZOBR_RS00925 at 185.648 kb on - strand, within AZOBR_RS00925 at 185.648 kb on - strand, within AZOBR_RS00925 at 185.648 kb on - strand, within AZOBR_RS00925 at 185.710 kb on + strand, within AZOBR_RS00925 at 185.710 kb on + strand, within AZOBR_RS00925 at 185.711 kb on - strand, within AZOBR_RS00925
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.125 mg/ml remove 183,428 + +3.1 183,654 + +0.7 183,654 + +1.3 183,654 + +0.3 183,654 + +1.0 183,654 + +0.9 183,654 + -1.1 183,655 - +0.2 183,766 - AZOBR_RS00920 0.14 +0.1 183,766 - AZOBR_RS00920 0.14 +2.3 183,771 + AZOBR_RS00920 0.14 -3.3 183,771 + AZOBR_RS00920 0.14 -5.0 183,772 - AZOBR_RS00920 0.14 -0.4 183,772 - AZOBR_RS00920 0.14 -0.4 183,772 - AZOBR_RS00920 0.14 +1.1 184,032 + AZOBR_RS00920 0.34 -0.2 184,032 + AZOBR_RS00920 0.34 -0.2 184,032 + AZOBR_RS00920 0.34 +0.1 184,033 - AZOBR_RS00920 0.34 -0.6 184,105 - AZOBR_RS00920 0.40 +0.6 184,105 - AZOBR_RS00920 0.40 +0.2 184,245 + AZOBR_RS00920 0.50 -2.1 184,272 + AZOBR_RS00920 0.52 +0.1 184,273 - AZOBR_RS00920 0.52 -0.4 184,359 + AZOBR_RS00920 0.59 -0.7 184,359 + AZOBR_RS00920 0.59 +0.1 184,360 - AZOBR_RS00920 0.59 +1.0 184,360 - AZOBR_RS00920 0.59 +0.8 184,464 + AZOBR_RS00920 0.67 -0.3 184,464 + AZOBR_RS00920 0.67 -2.5 184,465 - AZOBR_RS00920 0.67 -3.2 184,600 + AZOBR_RS00920 0.77 +1.2 184,600 + -0.8 184,624 - AZOBR_RS00920 0.79 +0.4 184,731 + AZOBR_RS00920 0.87 +1.1 184,790 - -2.1 184,935 + -2.1 184,984 - +1.7 185,647 + AZOBR_RS00925 0.34 -1.4 185,647 + AZOBR_RS00925 0.34 +0.3 185,647 + AZOBR_RS00925 0.34 -1.4 185,648 - AZOBR_RS00925 0.34 -0.4 185,648 - AZOBR_RS00925 0.34 -0.0 185,648 - AZOBR_RS00925 0.34 -4.5 185,648 - AZOBR_RS00925 0.34 +1.4 185,710 + AZOBR_RS00925 0.37 +0.1 185,710 + AZOBR_RS00925 0.37 -0.6 185,711 - AZOBR_RS00925 0.37 +0.3
Or see this region's nucleotide sequence