Strain Fitness in Pantoea sp. MT58 around IAI47_18620

Experiment: copper (II) chloride 5 uM, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 5 uM, aerobic
3,970,411	-		IAI47_18615	0.56	-0.4
3,970,411	-		IAI47_18615	0.56	-0.3
3,970,522	-		IAI47_18615	0.61	-0.3
3,970,541	+		IAI47_18615	0.62	-0.4
3,970,542	-		IAI47_18615	0.62	-1.9
3,970,542	-		IAI47_18615	0.62	-0.3
3,970,542	-		IAI47_18615	0.62	-0.5
3,970,542	-		IAI47_18615	0.62	-0.2
3,970,542	-		IAI47_18615	0.62	-0.8
3,970,587	+		IAI47_18615	0.64	-0.6
3,970,588	-		IAI47_18615	0.64	-0.5
3,970,610	+		IAI47_18615	0.65	-1.5
3,970,610	+		IAI47_18615	0.65	-0.4
3,970,611	-		IAI47_18615	0.65	+0.3
3,970,611	-		IAI47_18615	0.65	+1.0
3,970,611	-		IAI47_18615	0.65	-1.2
3,970,616	+		IAI47_18615	0.65	-0.4
3,970,616	+		IAI47_18615	0.65	-0.1
3,970,616	+		IAI47_18615	0.65	-0.0
3,970,616	+		IAI47_18615	0.65	-0.5
3,970,616	+		IAI47_18615	0.65	-0.9
3,970,616	+		IAI47_18615	0.65	-0.9
3,970,616	+		IAI47_18615	0.65	-0.9
3,970,616	+		IAI47_18615	0.65	-0.6
3,970,616	+		IAI47_18615	0.65	-0.3
3,970,617	-		IAI47_18615	0.65	-1.2
3,970,617	-		IAI47_18615	0.65	-0.9
3,970,617	-		IAI47_18615	0.65	-0.2
3,970,687	-		IAI47_18615	0.69	-1.1
3,970,687	-		IAI47_18615	0.69	-1.1
3,970,687	-		IAI47_18615	0.69	-1.5
3,970,770	+		IAI47_18615	0.73	-0.9
3,970,770	+		IAI47_18615	0.73	-0.6
3,970,770	+		IAI47_18615	0.73	-0.6
3,970,771	-		IAI47_18615	0.73	+0.8
3,970,771	-		IAI47_18615	0.73	-0.3
3,970,771	-		IAI47_18615	0.73	+0.0
3,970,771	-		IAI47_18615	0.73	-1.2
3,970,799	+		IAI47_18615	0.74	+0.4
3,970,799	+		IAI47_18615	0.74	-0.9
3,970,799	+		IAI47_18615	0.74	+0.1
3,970,799	+		IAI47_18615	0.74	+0.6
3,970,799	+		IAI47_18615	0.74	-0.4
3,970,799	+		IAI47_18615	0.74	-2.7
3,970,800	-		IAI47_18615	0.74	-1.1
3,970,800	-		IAI47_18615	0.74	-0.1
3,970,800	-		IAI47_18615	0.74	-0.3
3,970,800	-		IAI47_18615	0.74	+0.3
3,970,800	-		IAI47_18615	0.74	-0.3
3,970,800	-		IAI47_18615	0.74	-1.2
3,970,800	-		IAI47_18615	0.74	-1.8
3,970,800	-		IAI47_18615	0.74	-2.0
3,970,800	-		IAI47_18615	0.74	-0.6
3,970,800	-		IAI47_18615	0.74	-0.4
3,970,800	-		IAI47_18615	0.74	+0.1
3,970,800	-		IAI47_18615	0.74	+1.3
3,970,800	-		IAI47_18615	0.74	-2.5
3,970,800	-		IAI47_18615	0.74	-0.3
3,970,800	-		IAI47_18615	0.74	-0.4
3,970,805	-		IAI47_18615	0.74	+0.3
3,970,845	+		IAI47_18615	0.76	-3.5
3,970,845	+		IAI47_18615	0.76	-0.5
3,970,846	-		IAI47_18615	0.76	-0.1
3,970,846	-		IAI47_18615	0.76	+0.2
3,970,863	-		IAI47_18615	0.77	-0.7
3,970,869	+		IAI47_18615	0.77	-0.8
3,970,869	+		IAI47_18615	0.77	-0.9
3,970,870	-		IAI47_18615	0.77	+0.0
3,970,893	+		IAI47_18615	0.78	-2.9
3,970,894	-		IAI47_18615	0.78	-0.3
3,970,894	-		IAI47_18615	0.78	-0.8
3,970,894	-		IAI47_18615	0.78	-2.8
3,970,909	+		IAI47_18615	0.79	-2.3
3,970,909	+		IAI47_18615	0.79	-1.5
3,970,909	+		IAI47_18615	0.79	-1.4
3,970,910	-		IAI47_18615	0.79	+0.4
3,970,910	-		IAI47_18615	0.79	+0.3
3,970,910	-		IAI47_18615	0.79	-0.2
3,970,941	+		IAI47_18615	0.81	-0.1
3,970,942	-		IAI47_18615	0.81	-1.5
3,970,943	+		IAI47_18615	0.81	+1.1
3,970,943	+		IAI47_18615	0.81	-1.1
3,970,943	+		IAI47_18615	0.81	-1.0
3,970,943	+		IAI47_18615	0.81	-0.5
3,970,943	+		IAI47_18615	0.81	+0.1
3,970,943	+		IAI47_18615	0.81	+0.3
3,970,943	+		IAI47_18615	0.81	-0.8
3,970,943	+		IAI47_18615	0.81	-0.5
3,970,944	-		IAI47_18615	0.81	+0.3
3,970,944	-		IAI47_18615	0.81	-0.6
3,970,944	-		IAI47_18615	0.81	-0.2
3,970,944	-		IAI47_18615	0.81	+0.2
3,970,944	-		IAI47_18615	0.81	-1.2
3,970,944	-		IAI47_18615	0.81	+0.7
3,970,944	-		IAI47_18615	0.81	-0.6
3,970,944	-		IAI47_18615	0.81	-0.5
3,970,944	-		IAI47_18615	0.81	-0.3
3,970,955	+		IAI47_18615	0.81	+1.5
3,970,955	+		IAI47_18615	0.81	-0.2
3,970,955	+		IAI47_18615	0.81	-0.5
3,970,955	+		IAI47_18615	0.81	-0.5
3,970,955	+		IAI47_18615	0.81	+0.6
3,970,955	+		IAI47_18615	0.81	-0.1
3,970,955	+		IAI47_18615	0.81	-1.9
3,970,955	+		IAI47_18615	0.81	-0.1
3,970,955	+		IAI47_18615	0.81	+0.4
3,970,955	+		IAI47_18615	0.81	+1.0
3,970,955	+		IAI47_18615	0.81	-0.6
3,970,956	-		IAI47_18615	0.81	-0.0
3,970,956	-		IAI47_18615	0.81	-0.4
3,970,956	-		IAI47_18615	0.81	-1.0
3,970,956	-		IAI47_18615	0.81	-1.2
3,970,956	-		IAI47_18615	0.81	-0.7
3,970,956	-		IAI47_18615	0.81	-0.7
3,970,956	-		IAI47_18615	0.81	-0.8
3,970,956	-		IAI47_18615	0.81	-0.5
3,970,956	-		IAI47_18615	0.81	-2.0
3,970,956	-		IAI47_18615	0.81	-0.6
3,970,956	-		IAI47_18615	0.81	+0.2
3,970,959	+		IAI47_18615	0.81	+0.9
3,970,959	+		IAI47_18615	0.81	-0.8
3,970,959	+		IAI47_18615	0.81	-1.4
3,970,959	+		IAI47_18615	0.81	-0.4
3,970,959	+		IAI47_18615	0.81	-0.4
3,970,959	+		IAI47_18615	0.81	-0.8
3,970,959	+		IAI47_18615	0.81	-0.1
3,970,960	-		IAI47_18615	0.82	-0.4
3,970,960	-		IAI47_18615	0.82	+0.1
3,970,960	-		IAI47_18615	0.82	-1.0
3,971,015	-		IAI47_18615	0.84	-0.3
3,971,047	+		IAI47_18615	0.86	-1.6
3,971,047	+		IAI47_18615	0.86	-0.9
3,971,048	-		IAI47_18615	0.86	-0.9
3,971,048	-		IAI47_18615	0.86	-2.0
3,971,063	+		IAI47_18615	0.86	-0.0
3,971,063	+		IAI47_18615	0.86	+0.4
3,971,063	+		IAI47_18615	0.86	+0.5
3,971,063	+		IAI47_18615	0.86	+0.2
3,971,063	+		IAI47_18615	0.86	-0.3
3,971,063	+		IAI47_18615	0.86	-0.4
3,971,064	-		IAI47_18615	0.86	-0.1
3,971,064	-		IAI47_18615	0.86	-1.5
3,971,064	-		IAI47_18615	0.86	-0.8
3,971,064	-		IAI47_18615	0.86	+0.0
3,971,078	+		IAI47_18615	0.87	+1.0
3,971,078	+		IAI47_18615	0.87	-0.0
3,971,078	+		IAI47_18615	0.87	+2.0
3,971,078	+		IAI47_18615	0.87	-2.4
3,971,078	+		IAI47_18615	0.87	+0.1
3,971,079	-		IAI47_18615	0.87	-1.5
3,971,079	-		IAI47_18615	0.87	-0.3
3,971,079	-		IAI47_18615	0.87	+0.2
3,971,079	-		IAI47_18615	0.87	-0.5
3,971,079	-		IAI47_18615	0.87	-1.4
3,971,079	-		IAI47_18615	0.87	+0.0
3,971,079	-		IAI47_18615	0.87	+0.0
3,971,080	+		IAI47_18615	0.87	-1.9
3,971,080	+		IAI47_18615	0.87	+1.3
3,971,080	+		IAI47_18615	0.87	-1.7
3,971,080	+		IAI47_18615	0.87	-0.7
3,971,080	+		IAI47_18615	0.87	-1.1
3,971,080	+		IAI47_18615	0.87	-1.2
3,971,080	+		IAI47_18615	0.87	-0.7
3,971,081	-		IAI47_18615	0.87	-0.6
3,971,081	-		IAI47_18615	0.87	-1.9
3,971,081	-		IAI47_18615	0.87	-2.7
3,971,081	-		IAI47_18615	0.87	-0.3
3,971,081	-		IAI47_18615	0.87	-0.0
3,971,081	-		IAI47_18615	0.87	+0.6
3,971,092	+		IAI47_18615	0.88	+0.6
3,971,093	-		IAI47_18615	0.88	-0.3
3,971,097	+		IAI47_18615	0.88	-1.0
3,971,098	-		IAI47_18615	0.88	-1.0
3,971,098	-		IAI47_18615	0.88	+0.6
3,971,115	+		IAI47_18615	0.89	-0.3
3,971,116	-		IAI47_18615	0.89	+0.2
3,971,116	-		IAI47_18615	0.89	-1.0
3,971,134	-		IAI47_18615	0.90	-0.6
3,971,134	-		IAI47_18615	0.90	-0.5
3,971,134	-		IAI47_18615	0.90	-1.2
3,971,148	+				+1.6
3,971,148	+				+0.4
3,971,148	+				-1.0
3,971,148	+				-1.5
3,971,149	-				-1.6
3,971,149	-				+0.4
3,971,149	-				-1.0
3,971,149	-				-0.3
3,971,150	+				-0.4
3,971,150	+				-0.2
3,971,150	+				+0.6
3,971,150	+				-0.5
3,971,150	+				-0.6
3,971,150	+				+0.3
3,971,151	-				-1.0
3,971,151	-				+0.6
3,971,151	-				+0.2
3,971,194	+				-1.6
3,971,194	+				-0.4
3,971,222	-				+0.1
3,971,222	-				-0.9
3,971,222	-				+0.8
3,971,256	+				+0.7
3,971,256	+				-0.8
3,971,257	-				-0.1
3,971,257	-				+0.3
3,971,259	-				-3.1
3,971,259	-				+0.0
3,971,283	+				+1.3
3,971,284	-				-1.2
3,971,286	+				-0.1
3,971,286	+				-0.4
3,971,286	+				-1.3
3,971,286	+				-0.4
3,971,286	+				-0.3
3,971,287	-				-0.7
3,971,287	-				-0.2
3,971,287	-				+0.9
3,971,287	-				-0.1
3,971,330	+				-0.6
3,971,330	+				-0.9
3,971,343	+				+0.8
3,971,344	-				+0.2
3,971,374	+				-1.6
3,971,374	+				-1.3
3,971,374	+				-0.6
3,971,374	+				-0.5
3,971,374	+				-0.6
3,971,375	-				+0.1
3,971,375	-				+0.8
3,971,375	-				+0.7
3,971,378	+				-0.7
3,971,378	+				+0.1
3,971,378	+				+0.1
3,971,378	+				-0.4
3,971,379	-				-0.7
3,971,399	+				-0.5
3,971,402	+				-0.5
3,971,402	+				-0.0
3,971,403	-				-0.5
3,971,403	-				+0.5
3,971,451	+				-3.1
3,971,451	+				-1.0
3,971,452	-				-0.3
3,971,455	+				+1.2
3,971,455	+				+0.1
3,971,456	-				-0.6
3,971,456	-				-0.3
3,971,460	+				+0.5
3,971,460	+				-0.5
3,971,460	+				-0.9
3,971,461	-				+0.1
3,971,461	-				-0.0
3,971,461	-				-0.3
3,971,525	+		IAI47_18620	0.16	+0.1
3,971,587	+		IAI47_18620	0.24	+0.6
3,971,587	+		IAI47_18620	0.24	+0.7
3,971,587	+		IAI47_18620	0.24	-0.6
3,971,587	+		IAI47_18620	0.24	-2.2
3,971,588	-		IAI47_18620	0.24	-0.2
3,971,588	-		IAI47_18620	0.24	-0.3
3,971,588	-		IAI47_18620	0.24	+1.8
3,971,588	-		IAI47_18620	0.24	+0.7
3,971,593	-		IAI47_18620	0.24	+0.5
3,971,593	-		IAI47_18620	0.24	-1.2
3,971,613	+		IAI47_18620	0.27	-1.1
3,971,613	+		IAI47_18620	0.27	+1.2
3,971,613	+		IAI47_18620	0.27	-2.8
3,971,613	+		IAI47_18620	0.27	-1.3
3,971,614	-		IAI47_18620	0.27	+0.2
3,971,614	-		IAI47_18620	0.27	+0.3
3,971,614	-		IAI47_18620	0.27	-1.7
3,971,637	+				+0.6
3,971,637	+		IAI47_18620	0.30	-0.1
3,971,637	+		IAI47_18620	0.30	+0.7
3,971,668	-		IAI47_18620	0.34	-1.9
3,971,672	+		IAI47_18620	0.34	-0.1
3,971,673	-		IAI47_18620	0.34	-0.5
3,971,685	+		IAI47_18620	0.36	-1.6
3,971,685	+		IAI47_18620	0.36	-1.3
3,971,686	-		IAI47_18620	0.36	+0.6
3,971,688	+		IAI47_18620	0.36	+0.2
3,971,731	+		IAI47_18620	0.41	-0.8
3,971,732	-		IAI47_18620	0.42	+0.3
3,971,735	-		IAI47_18620	0.42	-0.8
3,971,751	+		IAI47_18620	0.44	+0.7
3,971,758	+		IAI47_18620	0.45	-0.2
3,971,758	+		IAI47_18620	0.45	-0.5
3,971,759	-		IAI47_18620	0.45	+0.5
3,971,759	-		IAI47_18620	0.45	-0.4
3,971,759	-		IAI47_18620	0.45	+0.4
3,971,770	+		IAI47_18620	0.46	-0.3
3,971,770	+		IAI47_18620	0.46	-0.0
3,971,770	+		IAI47_18620	0.46	-0.4
3,971,771	-		IAI47_18620	0.46	+0.0
3,971,778	+		IAI47_18620	0.47	-0.4
3,971,841	+		IAI47_18620	0.55	-2.3
3,971,841	+		IAI47_18620	0.55	+0.2
3,971,841	+		IAI47_18620	0.55	-0.2
3,971,842	-		IAI47_18620	0.55	-1.0
3,971,842	-		IAI47_18620	0.55	-0.3
3,971,855	+		IAI47_18620	0.57	-0.6
3,971,868	+		IAI47_18620	0.58	-1.0
3,971,883	+		IAI47_18620	0.60	-0.6
3,971,883	+		IAI47_18620	0.60	-1.8
3,971,884	-		IAI47_18620	0.60	+0.7
3,971,886	+		IAI47_18620	0.61	-0.9
3,971,886	+		IAI47_18620	0.61	-1.0
3,971,886	+		IAI47_18620	0.61	+0.8
3,971,887	-		IAI47_18620	0.61	-0.3
3,971,887	-		IAI47_18620	0.61	-0.2
3,971,952	-		IAI47_18620	0.69	-0.1
3,971,952	-		IAI47_18620	0.69	-1.3
3,971,952	-		IAI47_18620	0.69	-1.4
3,971,967	+		IAI47_18620	0.71	-0.3
3,971,967	+		IAI47_18620	0.71	+0.7
3,971,967	+		IAI47_18620	0.71	-0.5
3,971,967	+		IAI47_18620	0.71	-0.2
3,971,968	-		IAI47_18620	0.71	-0.8
3,971,968	-		IAI47_18620	0.71	-0.8
3,971,968	-		IAI47_18620	0.71	-0.2
3,972,194	-				-0.1
3,972,202	-				-0.4
3,972,202	-				+0.1
3,972,219	+				-1.4
3,972,315	-		IAI47_18625	0.21	-0.1
3,972,315	-		IAI47_18625	0.21	+0.2
3,972,315	-		IAI47_18625	0.21	-0.9
3,972,341	+		IAI47_18625	0.26	-1.0
3,972,369	+		IAI47_18625	0.30	-1.4
3,972,369	+		IAI47_18625	0.30	-0.4
3,972,369	+		IAI47_18625	0.30	-0.8
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