Strain Fitness in Pantoea sp. MT58 around IAI47_16860

Experiment: copper (II) chloride 5 uM, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 5 uM, aerobic
3,569,191	+		IAI47_16850	0.88	-0.0
3,569,191	+		IAI47_16850	0.88	-0.0
3,569,214	+		IAI47_16850	0.89	-0.6
3,569,214	+		IAI47_16850	0.89	-0.1
3,569,215	-		IAI47_16850	0.89	-0.0
3,569,271	-				-0.7
3,569,275	+				+0.8
3,569,275	+				-0.4
3,569,275	+				+0.3
3,569,275	+				-0.4
3,569,275	+				+0.3
3,569,276	-				-0.3
3,569,276	-				+0.0
3,569,276	-				+0.1
3,569,339	+				-0.4
3,569,360	+				+0.0
3,569,361	-				+0.4
3,569,361	-				-0.6
3,569,361	-				-0.8
3,569,362	+				+0.5
3,569,362	+				-0.2
3,569,363	-				-0.7
3,569,371	-				+0.2
3,569,371	-				+1.1
3,569,405	+				+0.3
3,569,405	+				+0.2
3,569,431	+				+0.5
3,569,431	+				-0.6
3,569,431	+				+1.5
3,569,463	+				-2.1
3,569,463	+				+0.4
3,569,464	-				-0.2
3,569,464	-				-0.1
3,569,503	+		IAI47_16855	0.12	-2.2
3,569,504	-		IAI47_16855	0.12	-0.1
3,569,572	+		IAI47_16855	0.25	+0.7
3,569,573	-		IAI47_16855	0.25	+0.4
3,569,620	+		IAI47_16855	0.34	-1.2
3,569,621	-		IAI47_16855	0.34	-0.4
3,569,625	+		IAI47_16855	0.35	-0.8
3,569,626	-		IAI47_16855	0.35	-0.3
3,569,626	-		IAI47_16855	0.35	-0.0
3,569,651	+		IAI47_16855	0.40	-1.6
3,569,651	+		IAI47_16855	0.40	-0.7
3,569,651	+		IAI47_16855	0.40	+1.6
3,569,652	-		IAI47_16855	0.40	-1.0
3,569,652	-		IAI47_16855	0.40	+0.9
3,569,658	+		IAI47_16855	0.41	-0.2
3,569,658	+		IAI47_16855	0.41	+0.5
3,569,659	-		IAI47_16855	0.41	-0.2
3,569,745	+		IAI47_16855	0.57	-0.9
3,569,745	+		IAI47_16855	0.57	-2.8
3,569,815	-		IAI47_16855	0.71	+1.3
3,569,821	+		IAI47_16855	0.72	-0.1
3,569,821	+		IAI47_16855	0.72	-0.0
3,569,842	+		IAI47_16855	0.76	+0.0
3,569,842	+		IAI47_16855	0.76	+0.6
3,569,842	+		IAI47_16855	0.76	-1.5
3,569,842	+		IAI47_16855	0.76	+0.3
3,569,842	+		IAI47_16855	0.76	+0.1
3,569,843	-		IAI47_16855	0.76	+0.1
3,569,843	-		IAI47_16855	0.76	-1.1
3,569,843	-		IAI47_16855	0.76	+0.5
3,569,843	-		IAI47_16855	0.76	+0.5
3,569,860	+		IAI47_16855	0.79	-0.1
3,569,860	+		IAI47_16855	0.79	-0.7
3,569,860	+		IAI47_16855	0.79	+0.2
3,569,861	-		IAI47_16855	0.79	-1.0
3,569,861	-		IAI47_16855	0.79	+0.6
3,569,907	+		IAI47_16855	0.88	-0.5
3,569,907	+		IAI47_16855	0.88	-0.1
3,569,907	+		IAI47_16855	0.88	+0.2
3,569,907	+		IAI47_16855	0.88	-0.1
3,569,907	+		IAI47_16855	0.88	-0.3
3,569,907	+		IAI47_16855	0.88	-0.0
3,569,908	-		IAI47_16855	0.88	-0.2
3,569,908	-		IAI47_16855	0.88	+0.1
3,569,908	-		IAI47_16855	0.88	-0.5
3,569,941	+				-1.1
3,569,942	-				-0.4
3,569,942	-				+1.0
3,569,942	-				-1.0
3,569,992	+				+0.2
3,570,020	+				-0.3
3,570,020	+				+0.4
3,570,020	+				+0.2
3,570,020	+				+2.8
3,570,020	+				+0.7
3,570,020	+				+0.7
3,570,020	+				+0.4
3,570,020	+				-1.1
3,570,021	-				-3.1
3,570,021	-				-1.9
3,570,021	-				-0.4
3,570,021	-				-2.2
3,570,021	-				-0.7
3,570,021	-				-1.7
3,570,021	-				-0.5
3,570,021	-				-0.8
3,570,021	-				-1.6
3,570,021	-				+0.2
3,570,028	+				-0.3
3,570,029	-				-1.0
3,570,029	-				-2.5
3,570,029	-				-1.8
3,570,091	+				-1.0
3,570,091	+				+0.5
3,570,174	+				-2.3
3,570,174	+				-2.1
3,570,174	+				-1.3
3,570,174	+				-1.6
3,570,174	+				-2.5
3,570,174	+				+0.6
3,570,174	+				-1.9
3,570,174	+				-2.3
3,570,175	-				-1.7
3,570,175	-				-1.4
3,570,175	-				-0.7
3,570,175	-				-1.8
3,570,175	-				-1.2
3,570,175	-				-0.2
3,570,175	-				-1.7
3,570,175	-				-1.8
3,570,175	-				-0.7
3,570,175	-				-2.9
3,570,175	-				-1.8
3,570,175	-				-1.9
3,570,188	+				-0.1
3,570,188	+				-2.6
3,570,188	+				-3.1
3,570,188	+				-2.0
3,570,188	+				-1.5
3,570,189	-				-2.5
3,570,190	+				+0.1
3,570,191	-				-2.7
3,570,307	-		IAI47_16860	0.14	-2.2
3,570,408	+		IAI47_16860	0.25	-1.5
3,570,408	+		IAI47_16860	0.25	-1.8
3,570,408	+		IAI47_16860	0.25	-3.1
3,570,408	+		IAI47_16860	0.25	-1.7
3,570,408	+		IAI47_16860	0.25	-2.8
3,570,408	+		IAI47_16860	0.25	-3.7
3,570,409	-		IAI47_16860	0.25	-2.3
3,570,409	-		IAI47_16860	0.25	-2.3
3,570,409	-		IAI47_16860	0.25	-2.6
3,570,409	-		IAI47_16860	0.25	-1.6
3,570,409	-		IAI47_16860	0.25	-1.6
3,570,411	+		IAI47_16860	0.25	-2.0
3,570,411	+		IAI47_16860	0.25	-1.5
3,570,411	+		IAI47_16860	0.25	-3.2
3,570,411	+		IAI47_16860	0.25	-1.6
3,570,412	-		IAI47_16860	0.25	-2.2
3,570,412	-		IAI47_16860	0.25	-0.8
3,570,412	-		IAI47_16860	0.25	-1.6
3,570,412	-		IAI47_16860	0.25	-2.5
3,570,412	-		IAI47_16860	0.25	-2.8
3,570,469	+		IAI47_16860	0.31	-1.4
3,570,469	+		IAI47_16860	0.31	-2.0
3,570,469	+		IAI47_16860	0.31	-2.7
3,570,470	-		IAI47_16860	0.32	-0.1
3,570,470	-		IAI47_16860	0.32	-0.8
3,570,470	-		IAI47_16860	0.32	-4.3
3,570,470	-		IAI47_16860	0.32	-2.5
3,570,470	-		IAI47_16860	0.32	-1.8
3,570,470	-		IAI47_16860	0.32	-2.4
3,570,470	-		IAI47_16860	0.32	-1.3
3,570,670	+		IAI47_16860	0.53	-1.4
3,570,671	-		IAI47_16860	0.53	-0.7
3,570,671	-		IAI47_16860	0.53	-1.7
3,570,671	-		IAI47_16860	0.53	-0.4
3,570,671	-		IAI47_16860	0.53	-2.0
3,570,766	+		IAI47_16860	0.63	-3.4
3,570,766	+		IAI47_16860	0.63	-1.4
3,570,766	+		IAI47_16860	0.63	-0.8
3,570,766	+		IAI47_16860	0.63	-0.1
3,570,766	+		IAI47_16860	0.63	-1.1
3,570,766	+		IAI47_16860	0.63	-2.9
3,570,766	+		IAI47_16860	0.63	-3.9
3,570,766	+		IAI47_16860	0.63	-1.3
3,570,766	+		IAI47_16860	0.63	-2.1
3,570,766	+		IAI47_16860	0.63	-3.4
3,570,767	-		IAI47_16860	0.63	-2.7
3,570,767	-		IAI47_16860	0.63	-3.1
3,570,767	-		IAI47_16860	0.63	-1.7
3,570,767	-		IAI47_16860	0.63	-1.7
3,570,767	-		IAI47_16860	0.63	-0.4
3,570,767	-		IAI47_16860	0.63	-2.0
3,570,767	-		IAI47_16860	0.63	-3.9
3,570,767	-		IAI47_16860	0.63	-3.2
3,570,767	-		IAI47_16860	0.63	-3.7
3,570,768	+		IAI47_16860	0.63	-2.8
3,570,768	+		IAI47_16860	0.63	-1.0
3,570,768	+		IAI47_16860	0.63	-2.2
3,570,768	+		IAI47_16860	0.63	-2.3
3,570,768	+		IAI47_16860	0.63	+0.3
3,570,768	+		IAI47_16860	0.63	-2.0
3,570,768	+		IAI47_16860	0.63	-2.1
3,570,768	+		IAI47_16860	0.63	-1.0
3,570,768	+		IAI47_16860	0.63	-1.7
3,570,768	+		IAI47_16860	0.63	-2.2
3,570,769	-		IAI47_16860	0.63	-1.4
3,570,769	-		IAI47_16860	0.63	-2.6
3,570,769	-		IAI47_16860	0.63	-1.9
3,570,769	-		IAI47_16860	0.63	-1.9
3,570,769	-		IAI47_16860	0.63	-1.3
3,570,769	-		IAI47_16860	0.63	-1.8
3,570,769	-		IAI47_16860	0.63	-3.4
3,570,769	-		IAI47_16860	0.63	-2.3
3,570,769	-		IAI47_16860	0.63	-2.9
3,570,769	-		IAI47_16860	0.63	-1.6
3,570,795	+		IAI47_16860	0.66	-0.0
3,570,795	+		IAI47_16860	0.66	-3.6
3,570,795	+		IAI47_16860	0.66	-1.0
3,570,795	+		IAI47_16860	0.66	-2.9
3,570,846	+		IAI47_16860	0.72	-0.9
3,570,853	+		IAI47_16860	0.72	-2.7
3,570,853	+		IAI47_16860	0.72	-1.8
3,570,853	+		IAI47_16860	0.72	-4.1
3,570,853	+		IAI47_16860	0.72	+0.9
3,570,854	-		IAI47_16860	0.73	-1.0
3,570,854	-		IAI47_16860	0.73	-3.1
3,570,854	-		IAI47_16860	0.73	-1.0
3,570,854	-		IAI47_16860	0.73	-2.1
3,570,854	-		IAI47_16860	0.73	-3.5
3,570,895	+		IAI47_16860	0.77	-2.5
3,570,895	+		IAI47_16860	0.77	-1.1
3,570,896	-		IAI47_16860	0.77	-2.6
3,570,905	+		IAI47_16860	0.78	-0.8
3,570,905	+		IAI47_16860	0.78	-2.8
3,570,905	+		IAI47_16860	0.78	-1.6
3,570,905	+		IAI47_16860	0.78	-2.4
3,570,905	+		IAI47_16860	0.78	-3.1
3,570,906	-		IAI47_16860	0.78	-0.9
3,570,906	-		IAI47_16860	0.78	-3.0
3,570,918	+		IAI47_16860	0.79	-3.5
3,570,918	+		IAI47_16860	0.79	-1.1
3,570,918	+		IAI47_16860	0.79	-3.4
3,570,918	+		IAI47_16860	0.79	-1.8
3,570,919	-		IAI47_16860	0.79	-1.3
3,570,919	-		IAI47_16860	0.79	-0.6
3,570,919	-		IAI47_16860	0.79	-1.4
3,571,022	-				-1.7
3,571,022	-				-1.1
3,571,030	+				-1.0
3,571,030	+				-0.6
3,571,031	-				-1.2
3,571,057	+				-1.5
3,571,057	+				+0.6
3,571,057	+				-2.4
3,571,057	+				-2.3
3,571,057	+				-3.2
3,571,057	+				-1.9
3,571,057	+				-1.6
3,571,057	+				-3.3
3,571,058	-				-3.1
3,571,058	-				-2.7
3,571,088	+				-0.1
3,571,089	-				-1.3
3,571,108	+				-0.3
3,571,108	+				+1.5
3,571,109	-				-1.2
3,571,109	-				+0.8
3,571,109	-				-1.6
3,571,202	+		IAI47_16865	0.17	+0.6
3,571,202	+		IAI47_16865	0.17	+0.3
3,571,202	+		IAI47_16865	0.17	+0.5
3,571,203	-		IAI47_16865	0.17	-0.6
3,571,203	-		IAI47_16865	0.17	-1.1
3,571,247	+		IAI47_16865	0.27	+0.0
3,571,248	-		IAI47_16865	0.27	-1.9
3,571,299	-		IAI47_16865	0.38	-0.6
3,571,299	-		IAI47_16865	0.38	-1.4
3,571,299	-		IAI47_16865	0.38	+0.3
3,571,299	-		IAI47_16865	0.38	-1.9
3,571,310	+		IAI47_16865	0.40	+0.1
3,571,350	+		IAI47_16865	0.49	-0.5
3,571,350	+		IAI47_16865	0.49	+1.1
3,571,350	+		IAI47_16865	0.49	+0.2
3,571,350	+		IAI47_16865	0.49	-0.3
3,571,350	+		IAI47_16865	0.49	+0.8
3,571,350	+		IAI47_16865	0.49	+0.7
3,571,350	+		IAI47_16865	0.49	+1.2
3,571,350	+		IAI47_16865	0.49	+0.4
3,571,350	+		IAI47_16865	0.49	+1.2
3,571,350	+		IAI47_16865	0.49	+0.4
3,571,351	-		IAI47_16865	0.49	+0.2
3,571,351	-		IAI47_16865	0.49	+1.4
3,571,351	-		IAI47_16865	0.49	+1.4
3,571,351	-		IAI47_16865	0.49	+0.2
3,571,351	-		IAI47_16865	0.49	-0.2
3,571,351	-		IAI47_16865	0.49	-0.8
3,571,386	+		IAI47_16865	0.57	+1.1
3,571,386	+		IAI47_16865	0.57	+0.4
3,571,387	-		IAI47_16865	0.57	-0.4
3,571,463	+		IAI47_16865	0.73	+0.6
3,571,463	+		IAI47_16865	0.73	-1.4
3,571,463	+		IAI47_16865	0.73	+1.4
3,571,463	+		IAI47_16865	0.73	-0.2
3,571,463	+		IAI47_16865	0.73	+0.0
3,571,463	+		IAI47_16865	0.73	+2.2
3,571,463	+		IAI47_16865	0.73	+0.8
3,571,464	-		IAI47_16865	0.74	-0.2
3,571,464	-		IAI47_16865	0.74	-1.5
3,571,496	+		IAI47_16865	0.80	-0.4
3,571,584	+				-0.9
3,571,584	+				-1.4
3,571,585	-				+0.8
3,571,585	-				+0.2
3,571,585	-				+0.6
3,571,603	+				+0.4
3,571,603	+				-0.1
3,571,603	+				-0.5
3,571,603	+				-0.3
3,571,603	+				+0.1
3,571,603	+				-0.2
3,571,603	+				-0.2
3,571,603	+				+0.8
3,571,603	+				+0.0
3,571,603	+				-0.6
3,571,603	+				-0.6
3,571,603	+				-1.3
3,571,604	-				-2.2
3,571,604	-				+1.4
3,571,604	-				-1.5
3,571,604	-				-1.3
3,571,604	-				+0.2
3,571,604	-				-1.2
3,571,604	-				-1.0
3,571,604	-				+2.6
3,571,604	-				-0.0
3,571,605	+				-0.9
3,571,605	+				+0.7
3,571,605	+				-0.2
3,571,606	-				+0.8
3,571,606	-				+2.7
3,571,606	-				-0.3
3,571,642	+				-0.0
3,571,642	+				+0.4
3,571,642	+				+0.1
3,571,642	+				+0.1
3,571,643	-				+0.6
3,571,676	+				-2.7
3,571,707	+		IAI47_16870	0.12	-3.7
3,571,707	+		IAI47_16870	0.12	+0.6
3,571,707	+		IAI47_16870	0.12	+0.2
3,571,707	+		IAI47_16870	0.12	-1.2
3,571,929	+		IAI47_16870	0.70	+0.3
3,571,929	+		IAI47_16870	0.70	-1.3
3,571,929	+		IAI47_16870	0.70	-0.7
3,571,929	+		IAI47_16870	0.70	-2.0
3,571,929	+		IAI47_16870	0.70	-1.7
3,571,929	+		IAI47_16870	0.70	-2.5
3,571,929	+		IAI47_16870	0.70	-2.2
3,571,929	+		IAI47_16870	0.70	-0.5
3,571,929	+		IAI47_16870	0.70	-0.3
3,571,929	+		IAI47_16870	0.70	-1.0
3,571,929	+		IAI47_16870	0.70	-2.1
3,571,929	+		IAI47_16870	0.70	-3.3
3,571,930	-		IAI47_16870	0.70	-1.5
3,571,930	-		IAI47_16870	0.70	-2.3
3,571,930	-		IAI47_16870	0.70	-1.0
3,571,930	-		IAI47_16870	0.70	-1.7
3,571,930	-		IAI47_16870	0.70	-3.0
3,571,930	-		IAI47_16870	0.70	-3.1
3,571,930	-		IAI47_16870	0.70	-0.6
3,571,930	-		IAI47_16870	0.70	-1.9
3,571,930	-		IAI47_16870	0.70	-1.3
3,571,930	-		IAI47_16870	0.70	-1.3
3,572,050	+				-0.4
3,572,050	+				-0.3
3,572,051	-				+0.9
3,572,096	+				+0.0
3,572,096	+				-0.1
3,572,097	-				+1.5
3,572,097	-				-0.2
3,572,103	+				-0.6
3,572,103	+				+0.2
3,572,103	+				+1.2
3,572,104	-				-2.5
3,572,104	-				+1.2