Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_4035

Experiment: D-Glucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_4034 and Ac3H11_4035 are separated by 284 nucleotidesAc3H11_4035 and Ac3H11_4036 are separated by 54 nucleotides Ac3H11_4034 - 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54), at 275,430 to 276,551 _4034 Ac3H11_4035 - FIG00347448: hypothetical protein, at 276,836 to 277,423 _4035 Ac3H11_4036 - TldD protein, part of TldE/TldD proteolytic complex, at 277,478 to 278,962 _4036 Position (kb) 276 277 278Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2at 276.002 kb on + strand, within Ac3H11_4034at 276.043 kb on + strand, within Ac3H11_4034at 276.043 kb on + strand, within Ac3H11_4034at 276.043 kb on + strand, within Ac3H11_4034at 276.043 kb on + strand, within Ac3H11_4034at 276.043 kb on + strand, within Ac3H11_4034at 276.043 kb on + strand, within Ac3H11_4034at 276.043 kb on + strand, within Ac3H11_4034at 276.043 kb on + strand, within Ac3H11_4034at 276.043 kb on + strand, within Ac3H11_4034at 276.044 kb on - strand, within Ac3H11_4034at 276.044 kb on - strand, within Ac3H11_4034at 276.044 kb on - strand, within Ac3H11_4034at 276.044 kb on - strand, within Ac3H11_4034at 276.044 kb on - strand, within Ac3H11_4034at 276.148 kb on + strand, within Ac3H11_4034at 276.148 kb on + strand, within Ac3H11_4034at 276.148 kb on + strand, within Ac3H11_4034at 276.149 kb on - strand, within Ac3H11_4034at 276.163 kb on + strand, within Ac3H11_4034at 276.164 kb on - strand, within Ac3H11_4034at 276.217 kb on + strand, within Ac3H11_4034at 276.250 kb on + strand, within Ac3H11_4034at 276.250 kb on + strand, within Ac3H11_4034at 276.283 kb on + strand, within Ac3H11_4034at 276.284 kb on - strand, within Ac3H11_4034at 276.473 kb on + strandat 276.473 kb on + strandat 276.473 kb on + strandat 276.473 kb on + strandat 276.474 kb on - strandat 276.474 kb on - strandat 276.474 kb on - strandat 276.474 kb on - strandat 276.474 kb on - strandat 276.474 kb on - strandat 276.474 kb on - strandat 276.474 kb on - strandat 276.474 kb on - strandat 276.474 kb on - strandat 276.474 kb on - strandat 276.642 kb on + strandat 276.643 kb on - strandat 276.698 kb on - strandat 276.698 kb on - strandat 276.745 kb on + strandat 276.745 kb on + strandat 276.745 kb on + strandat 276.745 kb on + strandat 276.745 kb on + strandat 276.745 kb on + strandat 276.745 kb on + strandat 276.745 kb on + strandat 276.745 kb on + strandat 276.745 kb on + strandat 276.745 kb on + strandat 276.745 kb on + strandat 276.745 kb on + strandat 276.746 kb on - strandat 276.746 kb on - strandat 276.746 kb on - strandat 276.746 kb on - strandat 276.746 kb on - strandat 276.746 kb on - strandat 276.746 kb on - strandat 276.746 kb on - strandat 276.746 kb on - strandat 276.746 kb on - strandat 276.746 kb on - strandat 276.746 kb on - strandat 276.746 kb on - strandat 276.746 kb on - strandat 276.746 kb on - strandat 276.746 kb on - strandat 276.746 kb on - strandat 276.939 kb on + strand, within Ac3H11_4035at 276.939 kb on + strand, within Ac3H11_4035at 276.939 kb on + strand, within Ac3H11_4035at 276.939 kb on + strand, within Ac3H11_4035at 276.939 kb on + strand, within Ac3H11_4035at 276.939 kb on + strand, within Ac3H11_4035at 276.939 kb on + strand, within Ac3H11_4035at 276.939 kb on + strand, within Ac3H11_4035at 276.939 kb on + strand, within Ac3H11_4035at 276.939 kb on + strand, within Ac3H11_4035at 276.939 kb on + strand, within Ac3H11_4035at 276.939 kb on + strand, within Ac3H11_4035at 276.939 kb on + strand, within Ac3H11_4035at 276.940 kb on - strand, within Ac3H11_4035at 276.940 kb on - strand, within Ac3H11_4035at 276.940 kb on - strand, within Ac3H11_4035at 276.940 kb on - strand, within Ac3H11_4035at 276.940 kb on - strand, within Ac3H11_4035at 276.940 kb on - strand, within Ac3H11_4035at 276.940 kb on - strand, within Ac3H11_4035at 276.940 kb on - strand, within Ac3H11_4035at 276.940 kb on - strand, within Ac3H11_4035at 276.940 kb on - strand, within Ac3H11_4035at 276.940 kb on - strand, within Ac3H11_4035at 276.940 kb on - strand, within Ac3H11_4035at 276.940 kb on - strand, within Ac3H11_4035at 276.940 kb on - strand, within Ac3H11_4035at 276.940 kb on - strand, within Ac3H11_4035at 276.940 kb on - strand, within Ac3H11_4035at 276.940 kb on - strand, within Ac3H11_4035at 276.943 kb on + strand, within Ac3H11_4035at 276.943 kb on + strand, within Ac3H11_4035at 276.943 kb on + strand, within Ac3H11_4035at 276.943 kb on + strand, within Ac3H11_4035at 276.943 kb on + strand, within Ac3H11_4035at 276.943 kb on + strand, within Ac3H11_4035at 276.943 kb on + strand, within Ac3H11_4035at 276.943 kb on + strand, within Ac3H11_4035at 276.943 kb on + strand, within Ac3H11_4035at 276.943 kb on + strand, within Ac3H11_4035at 276.943 kb on + strand, within Ac3H11_4035at 276.943 kb on + strand, within Ac3H11_4035at 276.943 kb on + strand, within Ac3H11_4035at 276.944 kb on - strand, within Ac3H11_4035at 276.944 kb on - strand, within Ac3H11_4035at 276.944 kb on - strand, within Ac3H11_4035at 276.944 kb on - strand, within Ac3H11_4035at 276.944 kb on - strand, within Ac3H11_4035at 276.944 kb on - strand, within Ac3H11_4035at 276.944 kb on - strand, within Ac3H11_4035at 276.944 kb on - strand, within Ac3H11_4035at 276.944 kb on - strand, within Ac3H11_4035at 277.089 kb on + strand, within Ac3H11_4035at 277.089 kb on + strand, within Ac3H11_4035at 277.090 kb on - strand, within Ac3H11_4035at 277.104 kb on + strand, within Ac3H11_4035at 277.104 kb on + strand, within Ac3H11_4035at 277.104 kb on + strand, within Ac3H11_4035at 277.104 kb on + strand, within Ac3H11_4035at 277.104 kb on + strand, within Ac3H11_4035at 277.105 kb on - strand, within Ac3H11_4035at 277.105 kb on - strand, within Ac3H11_4035at 277.105 kb on - strand, within Ac3H11_4035at 277.105 kb on - strand, within Ac3H11_4035at 277.692 kb on + strand, within Ac3H11_4036at 277.692 kb on + strand, within Ac3H11_4036at 277.692 kb on + strand, within Ac3H11_4036at 277.764 kb on + strand, within Ac3H11_4036at 277.764 kb on + strand, within Ac3H11_4036at 277.765 kb on - strand, within Ac3H11_4036at 277.824 kb on + strand, within Ac3H11_4036at 277.824 kb on + strand, within Ac3H11_4036at 277.824 kb on + strand, within Ac3H11_4036at 277.824 kb on + strand, within Ac3H11_4036at 277.824 kb on + strand, within Ac3H11_4036at 277.824 kb on + strand, within Ac3H11_4036at 277.824 kb on + strand, within Ac3H11_4036at 277.824 kb on + strand, within Ac3H11_4036at 277.824 kb on + strand, within Ac3H11_4036at 277.824 kb on + strand, within Ac3H11_4036at 277.824 kb on + strand, within Ac3H11_4036at 277.824 kb on + strand, within Ac3H11_4036at 277.824 kb on + strand, within Ac3H11_4036at 277.824 kb on + strand, within Ac3H11_4036at 277.825 kb on - strand, within Ac3H11_4036at 277.825 kb on - strand, within Ac3H11_4036at 277.825 kb on - strand, within Ac3H11_4036at 277.825 kb on - strand, within Ac3H11_4036at 277.825 kb on - strand, within Ac3H11_4036at 277.825 kb on - strand, within Ac3H11_4036at 277.825 kb on - strand, within Ac3H11_4036at 277.825 kb on - strand, within Ac3H11_4036at 277.825 kb on - strand, within Ac3H11_4036at 277.825 kb on - strand, within Ac3H11_4036at 277.825 kb on - strand, within Ac3H11_4036at 277.825 kb on - strand, within Ac3H11_4036at 277.825 kb on - strand, within Ac3H11_4036at 277.825 kb on - strand, within Ac3H11_4036at 277.860 kb on + strand, within Ac3H11_4036at 277.860 kb on + strand, within Ac3H11_4036at 277.861 kb on - strand, within Ac3H11_4036at 277.861 kb on - strand, within Ac3H11_4036at 277.861 kb on - strand, within Ac3H11_4036at 277.861 kb on - strand, within Ac3H11_4036at 277.861 kb on - strand, within Ac3H11_4036at 277.861 kb on - strand, within Ac3H11_4036at 277.929 kb on + strand, within Ac3H11_4036at 277.929 kb on + strand, within Ac3H11_4036at 277.929 kb on + strand, within Ac3H11_4036at 277.929 kb on + strand, within Ac3H11_4036at 277.929 kb on + strand, within Ac3H11_4036at 277.930 kb on - strandat 277.930 kb on - strand, within Ac3H11_4036at 278.247 kb on + strand, within Ac3H11_4036at 278.247 kb on + strand, within Ac3H11_4036at 278.247 kb on + strand, within Ac3H11_4036at 278.247 kb on + strand, within Ac3H11_4036at 278.247 kb on + strand, within Ac3H11_4036at 278.248 kb on - strand, within Ac3H11_4036at 278.248 kb on - strand, within Ac3H11_4036at 278.248 kb on - strand, within Ac3H11_4036at 278.248 kb on - strandat 278.248 kb on - strand, within Ac3H11_4036at 278.274 kb on + strand, within Ac3H11_4036at 278.274 kb on + strand, within Ac3H11_4036at 278.275 kb on - strand, within Ac3H11_4036at 278.421 kb on + strand, within Ac3H11_4036at 278.422 kb on - strand, within Ac3H11_4036at 278.422 kb on - strand, within Ac3H11_4036at 278.422 kb on - strand, within Ac3H11_4036

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C)
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276,002 + Ac3H11_4034 0.51 -3.7
276,043 + Ac3H11_4034 0.55 -4.0
276,043 + Ac3H11_4034 0.55 -2.9
276,043 + Ac3H11_4034 0.55 -3.3
276,043 + Ac3H11_4034 0.55 -2.4
276,043 + Ac3H11_4034 0.55 -4.4
276,043 + Ac3H11_4034 0.55 -2.4
276,043 + Ac3H11_4034 0.55 -3.7
276,043 + Ac3H11_4034 0.55 +0.5
276,043 + Ac3H11_4034 0.55 -2.6
276,044 - Ac3H11_4034 0.55 -3.6
276,044 - Ac3H11_4034 0.55 -3.6
276,044 - Ac3H11_4034 0.55 -0.8
276,044 - Ac3H11_4034 0.55 -4.5
276,044 - Ac3H11_4034 0.55 -2.5
276,148 + Ac3H11_4034 0.64 -3.0
276,148 + Ac3H11_4034 0.64 -1.8
276,148 + Ac3H11_4034 0.64 -3.8
276,149 - Ac3H11_4034 0.64 -2.3
276,163 + Ac3H11_4034 0.65 -2.3
276,164 - Ac3H11_4034 0.65 -2.6
276,217 + Ac3H11_4034 0.70 -4.1
276,250 + Ac3H11_4034 0.73 -3.4
276,250 + Ac3H11_4034 0.73 -3.4
276,283 + Ac3H11_4034 0.76 -4.8
276,284 - Ac3H11_4034 0.76 -3.4
276,473 + -1.2
276,473 + -2.9
276,473 + -3.4
276,473 + -4.2
276,474 - -2.2
276,474 - +0.5
276,474 - -1.4
276,474 - -1.8
276,474 - -1.7
276,474 - -2.4
276,474 - -1.9
276,474 - -1.7
276,474 - -2.5
276,474 - -0.9
276,474 - -1.7
276,642 + -2.5
276,643 - +0.9
276,698 - -0.3
276,698 - -0.2
276,745 + -4.0
276,745 + -3.4
276,745 + -2.1
276,745 + -3.0
276,745 + -3.1
276,745 + -2.9
276,745 + -1.6
276,745 + -2.2
276,745 + -3.4
276,745 + -2.9
276,745 + -2.6
276,745 + -1.2
276,745 + -2.2
276,746 - +0.9
276,746 - -0.4
276,746 - -1.0
276,746 - +0.4
276,746 - -0.3
276,746 - -0.4
276,746 - -1.2
276,746 - +0.8
276,746 - -0.3
276,746 - +0.2
276,746 - -1.4
276,746 - -0.4
276,746 - -0.7
276,746 - +0.0
276,746 - -0.3
276,746 - +0.6
276,746 - -0.3
276,939 + Ac3H11_4035 0.18 -1.6
276,939 + Ac3H11_4035 0.18 -0.6
276,939 + Ac3H11_4035 0.18 +0.1
276,939 + Ac3H11_4035 0.18 +1.2
276,939 + Ac3H11_4035 0.18 -0.2
276,939 + Ac3H11_4035 0.18 -0.2
276,939 + Ac3H11_4035 0.18 -0.2
276,939 + Ac3H11_4035 0.18 -1.4
276,939 + Ac3H11_4035 0.18 -0.4
276,939 + Ac3H11_4035 0.18 -0.7
276,939 + Ac3H11_4035 0.18 -0.6
276,939 + Ac3H11_4035 0.18 +0.7
276,939 + Ac3H11_4035 0.18 -0.3
276,940 - Ac3H11_4035 0.18 -0.2
276,940 - Ac3H11_4035 0.18 +0.2
276,940 - Ac3H11_4035 0.18 +0.4
276,940 - Ac3H11_4035 0.18 -0.9
276,940 - Ac3H11_4035 0.18 -1.1
276,940 - Ac3H11_4035 0.18 +0.1
276,940 - Ac3H11_4035 0.18 +1.1
276,940 - Ac3H11_4035 0.18 +0.2
276,940 - Ac3H11_4035 0.18 +0.2
276,940 - Ac3H11_4035 0.18 -0.9
276,940 - Ac3H11_4035 0.18 -0.2
276,940 - Ac3H11_4035 0.18 -1.0
276,940 - Ac3H11_4035 0.18 -1.6
276,940 - Ac3H11_4035 0.18 -0.5
276,940 - Ac3H11_4035 0.18 -0.4
276,940 - Ac3H11_4035 0.18 +1.8
276,940 - Ac3H11_4035 0.18 -0.6
276,943 + Ac3H11_4035 0.18 +0.1
276,943 + Ac3H11_4035 0.18 -0.7
276,943 + Ac3H11_4035 0.18 -0.5
276,943 + Ac3H11_4035 0.18 +1.6
276,943 + Ac3H11_4035 0.18 -0.0
276,943 + Ac3H11_4035 0.18 -0.9
276,943 + Ac3H11_4035 0.18 -0.9
276,943 + Ac3H11_4035 0.18 -0.1
276,943 + Ac3H11_4035 0.18 -0.5
276,943 + Ac3H11_4035 0.18 +0.1
276,943 + Ac3H11_4035 0.18 +0.7
276,943 + Ac3H11_4035 0.18 -1.5
276,943 + Ac3H11_4035 0.18 -0.1
276,944 - Ac3H11_4035 0.18 +0.1
276,944 - Ac3H11_4035 0.18 -0.1
276,944 - Ac3H11_4035 0.18 -0.4
276,944 - Ac3H11_4035 0.18 -1.4
276,944 - Ac3H11_4035 0.18 -0.2
276,944 - Ac3H11_4035 0.18 +0.0
276,944 - Ac3H11_4035 0.18 -0.3
276,944 - Ac3H11_4035 0.18 +0.1
276,944 - Ac3H11_4035 0.18 -1.0
277,089 + Ac3H11_4035 0.43 -2.1
277,089 + Ac3H11_4035 0.43 +0.3
277,090 - Ac3H11_4035 0.43 -1.9
277,104 + Ac3H11_4035 0.46 -0.0
277,104 + Ac3H11_4035 0.46 -1.1
277,104 + Ac3H11_4035 0.46 +0.3
277,104 + Ac3H11_4035 0.46 -0.9
277,104 + Ac3H11_4035 0.46 -0.2
277,105 - Ac3H11_4035 0.46 -0.8
277,105 - Ac3H11_4035 0.46 +0.6
277,105 - Ac3H11_4035 0.46 +0.0
277,105 - Ac3H11_4035 0.46 -0.9
277,692 + Ac3H11_4036 0.14 -0.8
277,692 + Ac3H11_4036 0.14 -0.1
277,692 + Ac3H11_4036 0.14 -0.3
277,764 + Ac3H11_4036 0.19 +0.8
277,764 + Ac3H11_4036 0.19 +0.2
277,765 - Ac3H11_4036 0.19 -3.6
277,824 + Ac3H11_4036 0.23 -0.6
277,824 + Ac3H11_4036 0.23 -0.0
277,824 + Ac3H11_4036 0.23 -0.3
277,824 + Ac3H11_4036 0.23 +0.3
277,824 + Ac3H11_4036 0.23 -0.2
277,824 + Ac3H11_4036 0.23 -0.5
277,824 + Ac3H11_4036 0.23 -1.7
277,824 + Ac3H11_4036 0.23 -1.6
277,824 + Ac3H11_4036 0.23 -0.9
277,824 + Ac3H11_4036 0.23 -0.9
277,824 + Ac3H11_4036 0.23 -1.1
277,824 + Ac3H11_4036 0.23 +1.6
277,824 + Ac3H11_4036 0.23 -0.3
277,824 + Ac3H11_4036 0.23 -0.6
277,825 - Ac3H11_4036 0.23 +0.6
277,825 - Ac3H11_4036 0.23 +0.5
277,825 - Ac3H11_4036 0.23 -0.0
277,825 - Ac3H11_4036 0.23 -0.9
277,825 - Ac3H11_4036 0.23 +0.3
277,825 - Ac3H11_4036 0.23 -1.3
277,825 - Ac3H11_4036 0.23 -1.1
277,825 - Ac3H11_4036 0.23 +0.4
277,825 - Ac3H11_4036 0.23 -0.0
277,825 - Ac3H11_4036 0.23 -0.1
277,825 - Ac3H11_4036 0.23 -0.2
277,825 - Ac3H11_4036 0.23 +0.5
277,825 - Ac3H11_4036 0.23 -0.8
277,825 - Ac3H11_4036 0.23 +0.9
277,860 + Ac3H11_4036 0.26 -0.7
277,860 + Ac3H11_4036 0.26 -1.0
277,861 - Ac3H11_4036 0.26 +0.5
277,861 - Ac3H11_4036 0.26 +0.3
277,861 - Ac3H11_4036 0.26 -1.0
277,861 - Ac3H11_4036 0.26 -0.2
277,861 - Ac3H11_4036 0.26 +0.2
277,861 - Ac3H11_4036 0.26 -0.4
277,929 + Ac3H11_4036 0.30 -0.9
277,929 + Ac3H11_4036 0.30 +0.4
277,929 + Ac3H11_4036 0.30 -1.8
277,929 + Ac3H11_4036 0.30 -0.7
277,929 + Ac3H11_4036 0.30 -0.7
277,930 - -0.6
277,930 - Ac3H11_4036 0.30 +0.4
278,247 + Ac3H11_4036 0.52 +0.3
278,247 + Ac3H11_4036 0.52 -0.1
278,247 + Ac3H11_4036 0.52 -0.4
278,247 + Ac3H11_4036 0.52 -0.2
278,247 + Ac3H11_4036 0.52 -0.6
278,248 - Ac3H11_4036 0.52 -0.2
278,248 - Ac3H11_4036 0.52 -3.2
278,248 - Ac3H11_4036 0.52 -0.5
278,248 - +2.0
278,248 - Ac3H11_4036 0.52 +0.5
278,274 + Ac3H11_4036 0.54 -0.3
278,274 + Ac3H11_4036 0.54 -0.0
278,275 - Ac3H11_4036 0.54 -0.9
278,421 + Ac3H11_4036 0.64 -0.2
278,422 - Ac3H11_4036 0.64 -0.8
278,422 - Ac3H11_4036 0.64 -1.1
278,422 - Ac3H11_4036 0.64 -1.1

Or see this region's nucleotide sequence