Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3613 and Ac3H11_3614 overlap by 4 nucleotides Ac3H11_3614 and Ac3H11_3615 are separated by 30 nucleotides Ac3H11_3615 and Ac3H11_3616 are separated by 100 nucleotides
Ac3H11_3613 - UDP-glucose 4-epimerase (EC 5.1.3.2), at 165,739 to 166,749
_3613
Ac3H11_3614 - Permease of the drug/metabolite transporter (DMT) superfamily, at 166,746 to 167,663
_3614
Ac3H11_3615 - Iron(III) dicitrate transport ATP-binding protein FecE (TC 3.A.1.14.1), at 167,694 to 168,323
_3615
Ac3H11_3616 - Putative threonine efflux protein, at 168,424 to 169,065
_3616
Position (kb) 166
167
168 Strain fitness (log2 ratio) -2
-1
0
1 at 165.901 kb on + strand, within Ac3H11_3613 at 165.902 kb on - strand, within Ac3H11_3613 at 166.024 kb on + strand, within Ac3H11_3613 at 166.189 kb on + strand, within Ac3H11_3613 at 166.953 kb on + strand, within Ac3H11_3614 at 166.953 kb on + strand, within Ac3H11_3614 at 167.277 kb on + strand, within Ac3H11_3614 at 167.278 kb on - strand, within Ac3H11_3614 at 167.419 kb on - strand, within Ac3H11_3614 at 167.440 kb on + strand, within Ac3H11_3614 at 167.448 kb on + strand, within Ac3H11_3614 at 167.542 kb on - strand, within Ac3H11_3614 at 167.661 kb on + strand at 167.720 kb on - strand at 167.919 kb on + strand, within Ac3H11_3615 at 167.919 kb on + strand, within Ac3H11_3615 at 168.087 kb on + strand, within Ac3H11_3615 at 168.087 kb on + strand, within Ac3H11_3615 at 168.088 kb on - strand, within Ac3H11_3615 at 168.374 kb on + strand at 168.375 kb on - strand at 168.418 kb on + strand at 168.418 kb on + strand at 168.419 kb on - strand at 168.419 kb on - strand at 168.437 kb on + strand at 168.437 kb on + strand at 168.438 kb on - strand at 168.630 kb on + strand, within Ac3H11_3616 at 168.631 kb on - strand, within Ac3H11_3616 at 168.658 kb on + strand, within Ac3H11_3616
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 165,901 + Ac3H11_3613 0.16 +0.0 165,902 - Ac3H11_3613 0.16 +1.3 166,024 + Ac3H11_3613 0.28 +1.1 166,189 + Ac3H11_3613 0.45 +0.4 166,953 + Ac3H11_3614 0.23 -0.2 166,953 + Ac3H11_3614 0.23 +0.1 167,277 + Ac3H11_3614 0.58 +0.2 167,278 - Ac3H11_3614 0.58 -0.1 167,419 - Ac3H11_3614 0.73 +0.2 167,440 + Ac3H11_3614 0.76 -1.2 167,448 + Ac3H11_3614 0.76 -0.2 167,542 - Ac3H11_3614 0.87 +0.2 167,661 + -0.2 167,720 - -0.7 167,919 + Ac3H11_3615 0.36 +0.7 167,919 + Ac3H11_3615 0.36 -0.5 168,087 + Ac3H11_3615 0.62 +0.3 168,087 + Ac3H11_3615 0.62 -0.3 168,088 - Ac3H11_3615 0.63 +0.0 168,374 + -1.0 168,375 - +0.5 168,418 + -1.1 168,418 + +1.2 168,419 - -0.8 168,419 - -0.1 168,437 + +0.9 168,437 + -2.2 168,438 - +0.3 168,630 + Ac3H11_3616 0.32 -0.6 168,631 - Ac3H11_3616 0.32 +0.5 168,658 + Ac3H11_3616 0.36 +0.4
Or see this region's nucleotide sequence