Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_1814 and Ac3H11_1815 overlap by 17 nucleotides Ac3H11_1815 and Ac3H11_1816 are separated by 28 nucleotides Ac3H11_1816 and Ac3H11_1817 are separated by 55 nucleotides
Ac3H11_1814 - low-specificity D-threonine aldolase, at 19,791 to 20,960
_1814
Ac3H11_1815 - Phosphoglycerate mutase (EC 5.4.2.1), at 20,944 to 21,585
_1815
Ac3H11_1816 - Probable lipoprotein transmembrane, at 21,614 to 22,228
_1816
Ac3H11_1817 - tRNA(Cytosine32)-2-thiocytidine synthetase, at 22,284 to 23,225
_1817
Position (kb) 20
21
22 Strain fitness (log2 ratio) -2
-1
0
1
2 at 19.966 kb on + strand, within Ac3H11_1814 at 19.999 kb on + strand, within Ac3H11_1814 at 20.396 kb on - strand, within Ac3H11_1814 at 20.396 kb on - strand, within Ac3H11_1814 at 21.108 kb on - strand, within Ac3H11_1815 at 21.239 kb on + strand, within Ac3H11_1815 at 21.239 kb on + strand, within Ac3H11_1815 at 21.239 kb on + strand, within Ac3H11_1815 at 21.240 kb on - strand, within Ac3H11_1815 at 21.240 kb on - strand, within Ac3H11_1815 at 21.240 kb on - strand, within Ac3H11_1815 at 21.425 kb on + strand, within Ac3H11_1815 at 21.425 kb on + strand, within Ac3H11_1815 at 21.425 kb on + strand, within Ac3H11_1815 at 21.426 kb on - strand, within Ac3H11_1815 at 21.426 kb on - strand, within Ac3H11_1815 at 21.426 kb on - strand, within Ac3H11_1815 at 21.426 kb on - strand, within Ac3H11_1815 at 21.426 kb on - strand, within Ac3H11_1815 at 21.426 kb on - strand, within Ac3H11_1815 at 21.426 kb on - strand, within Ac3H11_1815 at 21.426 kb on - strand, within Ac3H11_1815 at 21.426 kb on - strand, within Ac3H11_1815 at 21.426 kb on - strand, within Ac3H11_1815 at 21.426 kb on - strand, within Ac3H11_1815 at 21.426 kb on - strand, within Ac3H11_1815 at 21.708 kb on + strand, within Ac3H11_1816 at 21.708 kb on + strand, within Ac3H11_1816 at 21.708 kb on + strand, within Ac3H11_1816 at 21.708 kb on + strand, within Ac3H11_1816 at 21.708 kb on + strand, within Ac3H11_1816 at 21.708 kb on + strand, within Ac3H11_1816 at 21.709 kb on - strand, within Ac3H11_1816 at 21.759 kb on + strand, within Ac3H11_1816 at 21.760 kb on - strand, within Ac3H11_1816 at 21.760 kb on - strand, within Ac3H11_1816 at 21.903 kb on + strand, within Ac3H11_1816 at 21.903 kb on + strand at 21.903 kb on + strand, within Ac3H11_1816 at 21.904 kb on - strand, within Ac3H11_1816 at 21.912 kb on + strand, within Ac3H11_1816 at 21.930 kb on + strand, within Ac3H11_1816 at 21.930 kb on + strand, within Ac3H11_1816 at 21.931 kb on - strand, within Ac3H11_1816 at 21.931 kb on - strand, within Ac3H11_1816 at 22.086 kb on + strand, within Ac3H11_1816 at 22.086 kb on + strand, within Ac3H11_1816 at 22.087 kb on - strand, within Ac3H11_1816 at 22.408 kb on + strand, within Ac3H11_1817 at 22.408 kb on + strand, within Ac3H11_1817 at 22.408 kb on + strand, within Ac3H11_1817 at 22.409 kb on - strand, within Ac3H11_1817
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 19,966 + Ac3H11_1814 0.15 +0.0 19,999 + Ac3H11_1814 0.18 -0.8 20,396 - Ac3H11_1814 0.52 -0.7 20,396 - Ac3H11_1814 0.52 -2.3 21,108 - Ac3H11_1815 0.26 +0.5 21,239 + Ac3H11_1815 0.46 +1.0 21,239 + Ac3H11_1815 0.46 +0.4 21,239 + Ac3H11_1815 0.46 +1.0 21,240 - Ac3H11_1815 0.46 +0.5 21,240 - Ac3H11_1815 0.46 -0.2 21,240 - Ac3H11_1815 0.46 +1.0 21,425 + Ac3H11_1815 0.75 +0.5 21,425 + Ac3H11_1815 0.75 +1.0 21,425 + Ac3H11_1815 0.75 +0.4 21,426 - Ac3H11_1815 0.75 +0.5 21,426 - Ac3H11_1815 0.75 +1.4 21,426 - Ac3H11_1815 0.75 +1.2 21,426 - Ac3H11_1815 0.75 +0.8 21,426 - Ac3H11_1815 0.75 +0.2 21,426 - Ac3H11_1815 0.75 -0.0 21,426 - Ac3H11_1815 0.75 +1.5 21,426 - Ac3H11_1815 0.75 +1.9 21,426 - Ac3H11_1815 0.75 +0.2 21,426 - Ac3H11_1815 0.75 -0.1 21,426 - Ac3H11_1815 0.75 +0.8 21,426 - Ac3H11_1815 0.75 +0.8 21,708 + Ac3H11_1816 0.15 +0.7 21,708 + Ac3H11_1816 0.15 +0.8 21,708 + Ac3H11_1816 0.15 +0.3 21,708 + Ac3H11_1816 0.15 +0.1 21,708 + Ac3H11_1816 0.15 -0.2 21,708 + Ac3H11_1816 0.15 +0.3 21,709 - Ac3H11_1816 0.15 +0.3 21,759 + Ac3H11_1816 0.24 +0.3 21,760 - Ac3H11_1816 0.24 +0.4 21,760 - Ac3H11_1816 0.24 +0.4 21,903 + Ac3H11_1816 0.47 +0.7 21,903 + +0.7 21,903 + Ac3H11_1816 0.47 +0.1 21,904 - Ac3H11_1816 0.47 +1.3 21,912 + Ac3H11_1816 0.48 -1.5 21,930 + Ac3H11_1816 0.51 +0.5 21,930 + Ac3H11_1816 0.51 +0.3 21,931 - Ac3H11_1816 0.52 -0.7 21,931 - Ac3H11_1816 0.52 -0.1 22,086 + Ac3H11_1816 0.77 +0.4 22,086 + Ac3H11_1816 0.77 -0.2 22,087 - Ac3H11_1816 0.77 -0.4 22,408 + Ac3H11_1817 0.13 -1.0 22,408 + Ac3H11_1817 0.13 +1.3 22,408 + Ac3H11_1817 0.13 +0.2 22,409 - Ac3H11_1817 0.13 -0.3
Or see this region's nucleotide sequence