Experiment: Vancomycin 0.03 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS27745 and AZOBR_RS27750 are separated by 14 nucleotides AZOBR_RS27750 and AZOBR_RS27755 are separated by 131 nucleotides
AZOBR_RS27745: AZOBR_RS27745 - ethanolamine ammonia lyase large subunit, at 389,778 to 391,172
_RS27745
AZOBR_RS27750: AZOBR_RS27750 - ethanolamine ammonia-lyase, at 391,187 to 391,966
_RS27750
AZOBR_RS27755: AZOBR_RS27755 - conserved exported protein of unknown function, at 392,098 to 394,092
_RS27755
Position (kb) 391
392 Strain fitness (log2 ratio) -2
-1
0
1 at 390.324 kb on + strand, within AZOBR_RS27745 at 390.325 kb on - strand, within AZOBR_RS27745 at 390.633 kb on + strand, within AZOBR_RS27745 at 390.634 kb on - strand, within AZOBR_RS27745 at 390.634 kb on - strand, within AZOBR_RS27745 at 390.714 kb on + strand, within AZOBR_RS27745 at 390.714 kb on + strand, within AZOBR_RS27745 at 390.715 kb on - strand, within AZOBR_RS27745 at 390.780 kb on + strand, within AZOBR_RS27745 at 390.781 kb on - strand, within AZOBR_RS27745 at 390.781 kb on - strand, within AZOBR_RS27745 at 390.786 kb on + strand, within AZOBR_RS27745 at 390.873 kb on + strand, within AZOBR_RS27745 at 390.874 kb on - strand, within AZOBR_RS27745 at 390.874 kb on - strand, within AZOBR_RS27745 at 390.991 kb on - strand, within AZOBR_RS27745 at 391.020 kb on + strand, within AZOBR_RS27745 at 391.020 kb on + strand, within AZOBR_RS27745 at 391.021 kb on - strand, within AZOBR_RS27745 at 391.021 kb on - strand, within AZOBR_RS27745 at 391.021 kb on - strand, within AZOBR_RS27745 at 391.757 kb on + strand, within AZOBR_RS27750 at 391.758 kb on - strand, within AZOBR_RS27750 at 391.758 kb on - strand, within AZOBR_RS27750 at 392.293 kb on + strand at 392.294 kb on - strand at 392.294 kb on - strand at 392.353 kb on + strand, within AZOBR_RS27755 at 392.393 kb on - strand, within AZOBR_RS27755 at 392.941 kb on + strand, within AZOBR_RS27755 at 392.942 kb on - strand, within AZOBR_RS27755
Per-strain Table
Position Strand Gene LocusTag Fraction Vancomycin 0.03 mg/ml remove 390,324 + AZOBR_RS27745 0.39 +0.0 390,325 - AZOBR_RS27745 0.39 -0.6 390,633 + AZOBR_RS27745 0.61 -1.3 390,634 - AZOBR_RS27745 0.61 -0.1 390,634 - AZOBR_RS27745 0.61 -2.3 390,714 + AZOBR_RS27745 0.67 -1.5 390,714 + AZOBR_RS27745 0.67 +0.0 390,715 - AZOBR_RS27745 0.67 +0.1 390,780 + AZOBR_RS27745 0.72 -0.1 390,781 - AZOBR_RS27745 0.72 -1.0 390,781 - AZOBR_RS27745 0.72 -0.1 390,786 + AZOBR_RS27745 0.72 +0.2 390,873 + AZOBR_RS27745 0.78 -0.5 390,874 - AZOBR_RS27745 0.79 -0.5 390,874 - AZOBR_RS27745 0.79 -0.2 390,991 - AZOBR_RS27745 0.87 -0.2 391,020 + AZOBR_RS27745 0.89 +0.8 391,020 + AZOBR_RS27745 0.89 +0.4 391,021 - AZOBR_RS27745 0.89 -0.9 391,021 - AZOBR_RS27745 0.89 -2.2 391,021 - AZOBR_RS27745 0.89 +0.5 391,757 + AZOBR_RS27750 0.73 -1.6 391,758 - AZOBR_RS27750 0.73 -0.2 391,758 - AZOBR_RS27750 0.73 -0.2 392,293 + +0.7 392,294 - -1.4 392,294 - +0.0 392,353 + AZOBR_RS27755 0.13 -0.7 392,393 - AZOBR_RS27755 0.15 +0.1 392,941 + AZOBR_RS27755 0.42 -0.4 392,942 - AZOBR_RS27755 0.42 -1.0
Or see this region's nucleotide sequence