Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS11095
Experiment: Vancomycin 0.03 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Vancomycin 0.03 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,335,854 | - | +0.8 | |||
2,336,074 | - | AZOBR_RS11095 | 0.12 | -2.0 | |
2,336,119 | - | AZOBR_RS11095 | 0.16 | -2.5 | |
2,336,343 | + | AZOBR_RS11095 | 0.36 | -0.5 | |
2,336,803 | - | AZOBR_RS11095 | 0.79 | -4.1 | |
2,336,803 | - | AZOBR_RS11095 | 0.79 | -1.4 | |
2,336,983 | + | +0.4 | |||
2,337,045 | + | -1.6 | |||
2,337,045 | + | -2.6 | |||
2,337,046 | - | -0.0 | |||
2,337,046 | - | -0.5 | |||
2,337,138 | - | +0.1 | |||
2,337,435 | + | AZOBR_RS11100 | 0.27 | -0.3 | |
2,337,436 | - | AZOBR_RS11100 | 0.28 | -0.1 | |
2,337,436 | - | AZOBR_RS11100 | 0.28 | +0.1 | |
2,337,778 | - | +1.1 |
Or see this region's nucleotide sequence