Experiment: Vancomycin 0.03 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS08480 and AZOBR_RS08485 are separated by 94 nucleotides AZOBR_RS08485 and AZOBR_RS08490 are separated by 160 nucleotides AZOBR_RS08490 and AZOBR_RS08500 are separated by 987 nucleotides
AZOBR_RS08480: AZOBR_RS08480 - ABC transporter permease, at 1,779,951 to 1,781,165
_RS08480
AZOBR_RS08485: AZOBR_RS08485 - hypothetical protein, at 1,781,260 to 1,781,493
_RS08485
AZOBR_RS08490: AZOBR_RS08490 - hypothetical protein, at 1,781,654 to 1,781,872
_RS08490
AZOBR_RS08500: AZOBR_RS08500 - ABC transporter permease, at 1,782,860 to 1,783,843
_RS08500
Position (kb)
1781
1782 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1780.794 kb on + strand, within AZOBR_RS08480 at 1780.794 kb on + strand, within AZOBR_RS08480 at 1780.795 kb on - strand, within AZOBR_RS08480 at 1780.837 kb on - strand, within AZOBR_RS08480 at 1780.837 kb on - strand, within AZOBR_RS08480 at 1780.854 kb on - strand, within AZOBR_RS08480 at 1780.884 kb on + strand, within AZOBR_RS08480 at 1780.885 kb on - strand, within AZOBR_RS08480 at 1780.885 kb on - strand, within AZOBR_RS08480 at 1780.902 kb on + strand, within AZOBR_RS08480 at 1780.902 kb on + strand, within AZOBR_RS08480 at 1780.903 kb on - strand, within AZOBR_RS08480 at 1781.038 kb on - strand, within AZOBR_RS08480 at 1781.038 kb on - strand, within AZOBR_RS08480 at 1781.038 kb on - strand, within AZOBR_RS08480 at 1781.038 kb on - strand, within AZOBR_RS08480 at 1781.038 kb on - strand, within AZOBR_RS08480 at 1781.410 kb on + strand, within AZOBR_RS08485 at 1782.042 kb on + strand at 1782.117 kb on + strand at 1782.117 kb on + strand at 1782.117 kb on + strand at 1782.253 kb on - strand at 1782.330 kb on + strand at 1782.330 kb on + strand at 1782.331 kb on - strand at 1782.627 kb on - strand at 1782.627 kb on - strand at 1782.627 kb on - strand at 1782.729 kb on - strand at 1782.768 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Vancomycin 0.03 mg/ml remove 1,780,794 + AZOBR_RS08480 0.69 -0.3 1,780,794 + AZOBR_RS08480 0.69 +0.4 1,780,795 - AZOBR_RS08480 0.69 +0.2 1,780,837 - AZOBR_RS08480 0.73 -0.4 1,780,837 - AZOBR_RS08480 0.73 +0.1 1,780,854 - AZOBR_RS08480 0.74 -0.4 1,780,884 + AZOBR_RS08480 0.77 +0.2 1,780,885 - AZOBR_RS08480 0.77 +0.1 1,780,885 - AZOBR_RS08480 0.77 -0.3 1,780,902 + AZOBR_RS08480 0.78 +0.2 1,780,902 + AZOBR_RS08480 0.78 -0.1 1,780,903 - AZOBR_RS08480 0.78 -0.0 1,781,038 - AZOBR_RS08480 0.89 -2.1 1,781,038 - AZOBR_RS08480 0.89 +0.1 1,781,038 - AZOBR_RS08480 0.89 -0.5 1,781,038 - AZOBR_RS08480 0.89 +0.7 1,781,038 - AZOBR_RS08480 0.89 -0.6 1,781,410 + AZOBR_RS08485 0.64 -0.3 1,782,042 + -0.4 1,782,117 + +0.3 1,782,117 + -0.4 1,782,117 + +0.2 1,782,253 - +0.1 1,782,330 + -0.1 1,782,330 + -0.4 1,782,331 - +0.4 1,782,627 - -0.7 1,782,627 - +1.4 1,782,627 - -0.2 1,782,729 - +2.4 1,782,768 - -0.6
Or see this region's nucleotide sequence