Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS08360
Experiment: Vancomycin 0.03 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Vancomycin 0.03 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,757,607 | - | -0.4 | |||
1,757,864 | - | +0.2 | |||
1,757,962 | + | -0.5 | |||
1,757,963 | - | -0.8 | |||
1,757,963 | - | -0.1 | |||
1,757,995 | + | AZOBR_RS08360 | 0.11 | -0.1 | |
1,757,996 | - | AZOBR_RS08360 | 0.12 | +0.9 | |
1,758,163 | + | AZOBR_RS08360 | 0.26 | +0.1 | |
1,758,163 | + | AZOBR_RS08360 | 0.26 | +0.2 | |
1,758,607 | + | AZOBR_RS08360 | 0.63 | -0.2 | |
1,758,608 | - | AZOBR_RS08360 | 0.63 | -0.3 | |
1,758,620 | - | AZOBR_RS08360 | 0.64 | -0.9 | |
1,758,670 | + | AZOBR_RS08360 | 0.68 | +0.3 | |
1,758,670 | + | AZOBR_RS08360 | 0.68 | +0.8 | |
1,758,670 | + | AZOBR_RS08360 | 0.68 | +1.6 | |
1,758,723 | - | AZOBR_RS08360 | 0.73 | -0.3 | |
1,758,808 | - | AZOBR_RS08360 | 0.80 | +0.1 | |
1,758,854 | - | AZOBR_RS08360 | 0.84 | +0.2 |
Or see this region's nucleotide sequence