Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS06500
Experiment: Vancomycin 0.03 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Vancomycin 0.03 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,374,657 | - | AZOBR_RS06495 | 0.17 | +0.4 | |
1,374,983 | + | AZOBR_RS06495 | 0.51 | -1.2 | |
1,374,984 | - | AZOBR_RS06495 | 0.51 | -2.1 | |
1,375,136 | + | AZOBR_RS06495 | 0.67 | +0.5 | |
1,375,473 | - | -1.6 | |||
1,375,473 | - | +0.4 | |||
1,375,549 | + | -0.7 | |||
1,375,549 | + | -0.5 | |||
1,375,550 | - | +0.2 | |||
1,375,665 | - | +0.2 | |||
1,375,665 | - | +0.0 | |||
1,375,688 | + | +0.1 | |||
1,375,689 | - | -0.3 | |||
1,375,689 | - | -0.1 | |||
1,376,165 | + | AZOBR_RS06500 | 0.61 | +0.2 | |
1,376,364 | - | AZOBR_RS06500 | 0.83 | +0.3 | |
1,377,158 | - | AZOBR_RS06505 | 0.81 | -0.7 | |
1,377,158 | - | AZOBR_RS06505 | 0.81 | -0.1 | |
1,377,442 | - | +0.4 |
Or see this region's nucleotide sequence