Experiment: Vancomycin 0.03 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS02095 and AZOBR_RS02100 are separated by 111 nucleotides AZOBR_RS02100 and AZOBR_RS02105 are separated by 681 nucleotides
AZOBR_RS02095: AZOBR_RS02095 - hypothetical protein, at 430,046 to 430,396
_RS02095
AZOBR_RS02100: AZOBR_RS02100 - pirin, at 430,508 to 431,440
_RS02100
AZOBR_RS02105: AZOBR_RS02105 - hypothetical protein, at 432,122 to 432,700
_RS02105
Position (kb) 430
431
432 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 429.719 kb on + strand at 429.719 kb on + strand at 429.949 kb on - strand at 430.229 kb on + strand, within AZOBR_RS02095 at 430.271 kb on + strand, within AZOBR_RS02095 at 430.271 kb on + strand, within AZOBR_RS02095 at 430.272 kb on - strand, within AZOBR_RS02095 at 430.286 kb on + strand, within AZOBR_RS02095 at 430.286 kb on + strand, within AZOBR_RS02095 at 430.287 kb on - strand, within AZOBR_RS02095 at 430.352 kb on + strand, within AZOBR_RS02095 at 430.352 kb on + strand, within AZOBR_RS02095 at 430.395 kb on - strand at 430.608 kb on + strand, within AZOBR_RS02100 at 430.671 kb on + strand, within AZOBR_RS02100 at 430.758 kb on + strand, within AZOBR_RS02100 at 430.758 kb on + strand, within AZOBR_RS02100 at 430.758 kb on + strand, within AZOBR_RS02100 at 430.758 kb on + strand, within AZOBR_RS02100 at 430.758 kb on + strand, within AZOBR_RS02100 at 430.758 kb on + strand, within AZOBR_RS02100 at 430.758 kb on + strand, within AZOBR_RS02100 at 430.759 kb on - strand, within AZOBR_RS02100 at 430.759 kb on - strand, within AZOBR_RS02100 at 430.759 kb on - strand, within AZOBR_RS02100 at 430.759 kb on - strand, within AZOBR_RS02100 at 430.759 kb on - strand, within AZOBR_RS02100 at 430.759 kb on - strand, within AZOBR_RS02100 at 431.022 kb on + strand, within AZOBR_RS02100 at 431.022 kb on + strand, within AZOBR_RS02100 at 431.023 kb on - strand, within AZOBR_RS02100 at 431.023 kb on - strand, within AZOBR_RS02100 at 431.023 kb on - strand, within AZOBR_RS02100 at 431.127 kb on + strand, within AZOBR_RS02100 at 431.304 kb on + strand, within AZOBR_RS02100 at 431.304 kb on + strand, within AZOBR_RS02100 at 431.304 kb on + strand, within AZOBR_RS02100 at 431.304 kb on + strand, within AZOBR_RS02100 at 431.305 kb on - strand, within AZOBR_RS02100 at 431.440 kb on + strand at 431.440 kb on + strand at 431.441 kb on - strand at 431.441 kb on - strand at 431.516 kb on + strand at 431.516 kb on + strand at 431.527 kb on + strand at 431.528 kb on - strand at 431.542 kb on - strand at 431.549 kb on - strand at 431.549 kb on - strand at 431.659 kb on + strand at 431.659 kb on + strand at 431.660 kb on - strand at 431.832 kb on + strand at 431.833 kb on + strand at 431.833 kb on - strand at 431.837 kb on - strand at 431.837 kb on - strand at 431.932 kb on + strand at 432.074 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Vancomycin 0.03 mg/ml remove 429,719 + -0.4 429,719 + +0.4 429,949 - -3.2 430,229 + AZOBR_RS02095 0.52 -0.0 430,271 + AZOBR_RS02095 0.64 +0.3 430,271 + AZOBR_RS02095 0.64 -0.2 430,272 - AZOBR_RS02095 0.64 -0.1 430,286 + AZOBR_RS02095 0.68 -0.2 430,286 + AZOBR_RS02095 0.68 +0.4 430,287 - AZOBR_RS02095 0.69 -0.1 430,352 + AZOBR_RS02095 0.87 +0.3 430,352 + AZOBR_RS02095 0.87 +0.0 430,395 - -0.0 430,608 + AZOBR_RS02100 0.11 -0.1 430,671 + AZOBR_RS02100 0.17 +0.1 430,758 + AZOBR_RS02100 0.27 +0.3 430,758 + AZOBR_RS02100 0.27 +1.1 430,758 + AZOBR_RS02100 0.27 +0.4 430,758 + AZOBR_RS02100 0.27 -0.1 430,758 + AZOBR_RS02100 0.27 -0.3 430,758 + AZOBR_RS02100 0.27 +0.5 430,758 + AZOBR_RS02100 0.27 +0.4 430,759 - AZOBR_RS02100 0.27 +0.5 430,759 - AZOBR_RS02100 0.27 -0.0 430,759 - AZOBR_RS02100 0.27 -0.1 430,759 - AZOBR_RS02100 0.27 +0.2 430,759 - AZOBR_RS02100 0.27 -0.2 430,759 - AZOBR_RS02100 0.27 +0.0 431,022 + AZOBR_RS02100 0.55 +0.0 431,022 + AZOBR_RS02100 0.55 -0.0 431,023 - AZOBR_RS02100 0.55 -0.3 431,023 - AZOBR_RS02100 0.55 +1.0 431,023 - AZOBR_RS02100 0.55 +0.0 431,127 + AZOBR_RS02100 0.66 +0.3 431,304 + AZOBR_RS02100 0.85 -0.0 431,304 + AZOBR_RS02100 0.85 -0.1 431,304 + AZOBR_RS02100 0.85 -0.3 431,304 + AZOBR_RS02100 0.85 +0.2 431,305 - AZOBR_RS02100 0.85 +0.9 431,440 + +0.1 431,440 + -0.4 431,441 - -0.1 431,441 - -0.2 431,516 + +0.5 431,516 + +0.3 431,527 + +0.5 431,528 - -1.4 431,542 - -0.3 431,549 - -1.7 431,549 - -0.0 431,659 + +0.5 431,659 + +1.1 431,660 - +0.3 431,832 + -0.0 431,833 + +0.4 431,833 - +0.5 431,837 - -0.3 431,837 - +0.0 431,932 + +0.9 432,074 - -0.7
Or see this region's nucleotide sequence