Strain Fitness in Pantoea sp. MT58 around IAI47_18805

Experiment: Cadmium acetate 8 uM, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cadmium acetate 8 uM, aerobic
4,008,016	+				-0.4
4,008,017	-				+0.8
4,008,017	-				-1.5
4,008,119	+		IAI47_18800	0.16	-0.0
4,008,119	+		IAI47_18800	0.16	+0.5
4,008,119	+		IAI47_18800	0.16	+0.1
4,008,119	+		IAI47_18800	0.16	-0.1
4,008,119	+		IAI47_18800	0.16	-1.9
4,008,119	+		IAI47_18800	0.16	-0.4
4,008,120	-		IAI47_18800	0.16	-0.4
4,008,369	+		IAI47_18800	0.42	+1.1
4,008,370	-		IAI47_18800	0.42	+0.6
4,008,438	+		IAI47_18800	0.50	+1.3
4,008,507	+		IAI47_18800	0.57	+0.4
4,008,535	+		IAI47_18800	0.60	-2.3
4,008,535	+		IAI47_18800	0.60	+1.0
4,008,535	+		IAI47_18800	0.60	-1.6
4,008,536	-		IAI47_18800	0.60	-1.1
4,008,536	-		IAI47_18800	0.60	+0.7
4,008,536	-		IAI47_18800	0.60	+1.0
4,008,597	+		IAI47_18800	0.67	+2.5
4,008,597	+		IAI47_18800	0.67	-0.6
4,008,597	+		IAI47_18800	0.67	+0.2
4,008,597	+		IAI47_18800	0.67	+0.3
4,008,598	-		IAI47_18800	0.67	+0.4
4,008,598	-		IAI47_18800	0.67	+0.0
4,008,598	-		IAI47_18800	0.67	-2.6
4,008,598	-		IAI47_18800	0.67	+0.9
4,008,598	-		IAI47_18800	0.67	-0.9
4,008,598	-		IAI47_18800	0.67	+1.3
4,008,598	-		IAI47_18800	0.67	-0.6
4,008,598	-		IAI47_18800	0.67	+0.2
4,008,598	-		IAI47_18800	0.67	+0.3
4,008,671	+		IAI47_18800	0.75	+0.2
4,008,671	+		IAI47_18800	0.75	+0.9
4,008,672	-		IAI47_18800	0.75	-0.8
4,008,672	-		IAI47_18800	0.75	+0.8
4,008,672	-		IAI47_18800	0.75	+1.5
4,008,689	+		IAI47_18800	0.77	-0.9
4,008,689	+		IAI47_18800	0.77	+0.1
4,008,690	-		IAI47_18800	0.77	+0.0
4,008,690	-		IAI47_18800	0.77	-0.2
4,008,798	+		IAI47_18800	0.88	-0.2
4,008,798	+		IAI47_18800	0.88	-0.4
4,008,799	-		IAI47_18800	0.88	-0.0
4,008,799	-		IAI47_18800	0.88	-0.9
4,008,799	-		IAI47_18800	0.88	-0.2
4,008,800	+		IAI47_18800	0.89	+0.8
4,008,800	+		IAI47_18800	0.89	-1.1
4,008,800	+		IAI47_18800	0.89	-0.2
4,008,800	+		IAI47_18800	0.89	-1.1
4,008,800	+		IAI47_18800	0.89	+0.2
4,008,800	+		IAI47_18800	0.89	-0.1
4,008,800	+		IAI47_18800	0.89	+1.2
4,008,800	+		IAI47_18800	0.89	-1.5
4,008,801	-		IAI47_18800	0.89	+0.4
4,008,801	-		IAI47_18800	0.89	-0.5
4,008,801	-		IAI47_18800	0.89	+0.8
4,008,906	+				+0.3
4,008,907	-				-0.5
4,008,921	+				-1.0
4,008,921	+				-0.6
4,008,921	+				-0.1
4,008,922	-				+0.0
4,008,922	-				+0.4
4,008,922	-				-0.0
4,008,922	-				+0.6
4,008,922	-				+1.4
4,008,970	+				-0.6
4,008,971	-				-0.0
4,009,029	+		IAI47_18805	0.17	-0.3
4,009,029	+		IAI47_18805	0.17	-0.4
4,009,029	+		IAI47_18805	0.17	-0.5
4,009,029	+		IAI47_18805	0.17	+1.0
4,009,030	-		IAI47_18805	0.17	+0.4
4,009,030	-		IAI47_18805	0.17	+0.4
4,009,030	-		IAI47_18805	0.17	+1.7
4,009,032	+		IAI47_18805	0.17	+0.5
4,009,032	+		IAI47_18805	0.17	-0.3
4,009,032	+		IAI47_18805	0.17	-0.7
4,009,032	+		IAI47_18805	0.17	-0.7
4,009,032	+		IAI47_18805	0.17	+0.1
4,009,032	+		IAI47_18805	0.17	-1.2
4,009,033	-		IAI47_18805	0.17	-0.1
4,009,033	-		IAI47_18805	0.17	+0.9
4,009,033	-		IAI47_18805	0.17	+0.3
4,009,033	-		IAI47_18805	0.17	+0.0
4,009,033	-		IAI47_18805	0.17	-1.4
4,009,036	-		IAI47_18805	0.18	-1.7
4,009,036	-		IAI47_18805	0.18	+1.2
4,009,036	-		IAI47_18805	0.18	+0.1
4,009,036	-		IAI47_18805	0.18	-0.8
4,009,036	-				+2.0
4,009,096	+		IAI47_18805	0.27	-0.5
4,009,096	+		IAI47_18805	0.27	+0.1
4,009,096	+		IAI47_18805	0.27	-0.5
4,009,096	+		IAI47_18805	0.27	+0.3
4,009,096	+		IAI47_18805	0.27	-0.7
4,009,097	-		IAI47_18805	0.27	+0.0
4,009,097	-		IAI47_18805	0.27	-1.1
4,009,097	-		IAI47_18805	0.27	-0.6
4,009,137	+		IAI47_18805	0.33	-0.4
4,009,137	+		IAI47_18805	0.33	-0.3
4,009,137	+		IAI47_18805	0.33	+0.0
4,009,176	+		IAI47_18805	0.39	+0.2
4,009,185	+		IAI47_18805	0.40	-1.3
4,009,186	-		IAI47_18805	0.40	+0.0
4,009,186	-		IAI47_18805	0.40	-1.5
4,009,221	-		IAI47_18805	0.46	-0.9
4,009,247	+		IAI47_18805	0.50	+0.1
4,009,265	+		IAI47_18805	0.52	-0.1
4,009,265	+		IAI47_18805	0.52	+2.0
4,009,265	+		IAI47_18805	0.52	-0.6
4,009,265	+		IAI47_18805	0.52	+1.0
4,009,265	+		IAI47_18805	0.52	-0.7
4,009,265	+		IAI47_18805	0.52	+0.0
4,009,265	+		IAI47_18805	0.52	-0.7
4,009,266	-		IAI47_18805	0.52	+0.2
4,009,266	-		IAI47_18805	0.52	-0.1
4,009,266	-		IAI47_18805	0.52	-1.4
4,009,266	-		IAI47_18805	0.52	-0.7
4,009,266	-		IAI47_18805	0.52	-2.0
4,009,283	+		IAI47_18805	0.55	-1.0
4,009,283	+		IAI47_18805	0.55	+0.0
4,009,283	+		IAI47_18805	0.55	+0.5
4,009,283	+		IAI47_18805	0.55	-1.0
4,009,284	-		IAI47_18805	0.55	-0.4
4,009,284	-		IAI47_18805	0.55	-1.5
4,009,359	+		IAI47_18805	0.67	+0.2
4,009,360	-		IAI47_18805	0.67	+0.2
4,009,378	-		IAI47_18805	0.69	-0.5
4,009,391	+		IAI47_18805	0.71	+1.2
4,009,428	+		IAI47_18805	0.77	-1.2
4,009,444	+		IAI47_18805	0.79	-0.3
4,009,444	+		IAI47_18805	0.79	+1.4
4,009,445	-		IAI47_18805	0.80	-1.0
4,009,445	-		IAI47_18805	0.80	-1.1
4,009,446	+		IAI47_18805	0.80	-2.4
4,009,446	+		IAI47_18805	0.80	-0.2
4,009,446	+		IAI47_18805	0.80	-2.5
4,009,447	-		IAI47_18805	0.80	+0.5
4,009,501	+		IAI47_18805	0.88	-1.6
4,009,506	+		IAI47_18805	0.89	-0.3
4,009,507	-		IAI47_18805	0.89	-0.7
4,009,507	-		IAI47_18805	0.89	-0.1
4,009,507	-		IAI47_18805	0.89	-1.2
4,009,507	-		IAI47_18805	0.89	-0.5
4,009,507	-				+1.4
4,009,507	-		IAI47_18805	0.89	-0.8
4,009,507	-		IAI47_18805	0.89	+1.5
4,009,571	+				-1.0
4,009,571	+				+0.7
4,009,572	-				-0.0
4,009,572	-				-1.5
4,009,572	-				-0.8
4,009,572	-				-0.3
4,009,587	+				-0.2
4,009,588	-				+0.1
4,009,606	+				-1.0
4,009,607	-				+1.5
4,009,607	-				-0.5
4,009,607	-				-1.5
4,009,618	+				-0.3
4,009,619	-				+0.3
4,009,671	+				-0.2
4,009,671	+				+0.9
4,009,671	+				+0.1
4,009,671	+				+1.0
4,009,671	+				+0.0
4,009,672	-				+0.8
4,009,672	-				+0.4
4,009,672	-				+1.5
4,009,682	+				-0.0
4,009,683	-				-0.6
4,009,697	-				+0.0
4,009,697	-				-0.8
4,009,836	+				+0.4
4,009,836	+				+0.1
4,009,836	+				-0.7
4,009,836	+				+0.3
4,009,836	+				+0.0
4,009,836	+				+0.3
4,009,836	+				-0.2
4,009,836	+				-0.7
4,009,837	-				-0.7
4,009,837	-				+1.5
4,009,837	-				+0.7
4,009,837	-				-0.6
4,009,837	-				+0.9
4,009,837	-				+1.1
4,009,837	-				+0.5
4,009,837	-				+0.4
4,009,838	+				-0.6
4,009,838	+				-0.7
4,009,838	+				+0.5
4,009,839	-				-0.6
4,009,839	-				+0.6
4,009,952	+		IAI47_18810	0.17	-0.9
4,009,952	+		IAI47_18810	0.17	-0.2
4,009,952	+		IAI47_18810	0.17	-0.6
4,009,952	+		IAI47_18810	0.17	+1.0
4,010,028	+		IAI47_18810	0.23	+3.1
4,010,029	-		IAI47_18810	0.23	+0.0
4,010,045	+		IAI47_18810	0.24	-1.6
4,010,124	-		IAI47_18810	0.30	+1.2
4,010,171	+		IAI47_18810	0.33	-0.0
4,010,205	-		IAI47_18810	0.36	+2.2
4,010,209	+		IAI47_18810	0.36	+0.6
4,010,210	-		IAI47_18810	0.36	-0.6
4,010,210	-		IAI47_18810	0.36	-2.0
4,010,285	+		IAI47_18810	0.42	+0.4
4,010,285	+		IAI47_18810	0.42	-0.8
4,010,285	+		IAI47_18810	0.42	-0.7
4,010,285	+		IAI47_18810	0.42	-1.1
4,010,286	-		IAI47_18810	0.42	-1.2
4,010,286	-		IAI47_18810	0.42	+0.9
4,010,286	-		IAI47_18810	0.42	+0.1
4,010,286	-		IAI47_18810	0.42	+1.3
4,010,286	-		IAI47_18810	0.42	+0.3
4,010,286	-		IAI47_18810	0.42	-0.7
4,010,286	-		IAI47_18810	0.42	-0.3
4,010,289	-		IAI47_18810	0.42	-0.4
4,010,334	+		IAI47_18810	0.46	-1.6
4,010,422	+		IAI47_18810	0.53	+0.1
4,010,422	+		IAI47_18810	0.53	-1.0
4,010,423	-		IAI47_18810	0.53	-0.4
4,010,438	+		IAI47_18810	0.54	-1.3
4,010,438	+		IAI47_18810	0.54	+0.3
4,010,439	-		IAI47_18810	0.54	+0.0
4,010,441	+		IAI47_18810	0.54	-0.3
4,010,442	-		IAI47_18810	0.54	+0.2
4,010,442	-		IAI47_18810	0.54	-0.6
4,010,442	-		IAI47_18810	0.54	+0.6
4,010,442	-		IAI47_18810	0.54	-0.7
4,010,442	-		IAI47_18810	0.54	-0.9
4,010,486	+		IAI47_18810	0.57	+0.7
4,010,486	+		IAI47_18810	0.57	+1.0
4,010,486	+		IAI47_18810	0.57	+0.7
4,010,487	-		IAI47_18810	0.58	-0.5
4,010,487	-		IAI47_18810	0.58	+1.1
4,010,487	-		IAI47_18810	0.58	+0.5
4,010,487	-		IAI47_18810	0.58	-1.9
4,010,487	-		IAI47_18810	0.58	+0.0
4,010,487	-		IAI47_18810	0.58	+0.8
4,010,487	-		IAI47_18810	0.58	-0.3
4,010,538	-		IAI47_18810	0.61	-0.2