Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_4744 and Ac3H11_4745 are separated by 4 nucleotides Ac3H11_4745 and Ac3H11_4746 overlap by 26 nucleotides Ac3H11_4746 and Ac3H11_4747 overlap by 6 nucleotides Ac3H11_4747 and Ac3H11_4748 are separated by 183 nucleotides Ac3H11_4748 and Ac3H11_4749 are separated by 135 nucleotides Ac3H11_4749 and Ac3H11_4750 are separated by 1 nucleotides
Ac3H11_4744 - hypothetical protein, at 48,430 to 48,552
_4744
Ac3H11_4745 - FIG137478: Hypothetical protein YbgI, at 48,557 to 49,324
_4745
Ac3H11_4746 - hypothetical protein, at 49,299 to 49,454
_4746
Ac3H11_4747 - 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262), at 49,449 to 50,477
_4747
Ac3H11_4748 - Large-conductance mechanosensitive channel, at 50,661 to 51,092
_4748
Ac3H11_4749 - hypothetical protein, at 51,228 to 51,431
_4749
Ac3H11_4750 - Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2), at 51,433 to 51,843
_4750
Position (kb)
49
50
51 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 48.848 kb on + strand, within Ac3H11_4745 at 49.112 kb on + strand, within Ac3H11_4745 at 49.113 kb on - strand, within Ac3H11_4745 at 49.113 kb on - strand, within Ac3H11_4745 at 49.113 kb on - strand, within Ac3H11_4745 at 49.343 kb on + strand, within Ac3H11_4746 at 49.343 kb on + strand, within Ac3H11_4746 at 49.344 kb on - strand, within Ac3H11_4746 at 49.344 kb on - strand, within Ac3H11_4746 at 49.361 kb on + strand, within Ac3H11_4746 at 49.362 kb on - strand, within Ac3H11_4746 at 50.476 kb on - strand at 50.507 kb on + strand at 50.507 kb on + strand at 50.507 kb on + strand at 50.507 kb on + strand at 50.508 kb on - strand at 50.508 kb on - strand at 50.508 kb on - strand at 50.508 kb on - strand at 50.508 kb on - strand at 50.508 kb on - strand at 50.528 kb on + strand at 50.528 kb on + strand at 50.528 kb on + strand at 50.528 kb on + strand at 50.528 kb on + strand at 50.528 kb on + strand at 50.528 kb on + strand at 50.528 kb on + strand at 50.528 kb on + strand at 50.528 kb on + strand at 50.528 kb on + strand at 50.529 kb on - strand at 50.529 kb on - strand at 50.529 kb on - strand at 50.529 kb on - strand at 50.529 kb on - strand at 50.529 kb on - strand at 50.529 kb on - strand at 50.529 kb on - strand at 50.529 kb on - strand at 50.529 kb on - strand at 50.529 kb on - strand at 50.529 kb on - strand at 50.529 kb on - strand at 50.529 kb on - strand at 50.529 kb on - strand at 50.658 kb on + strand at 50.659 kb on - strand at 50.659 kb on - strand at 50.662 kb on + strand at 50.662 kb on + strand at 50.662 kb on + strand at 50.662 kb on + strand at 50.662 kb on + strand at 50.662 kb on + strand at 50.662 kb on + strand at 50.662 kb on + strand at 50.662 kb on + strand at 50.662 kb on + strand at 50.662 kb on + strand at 50.662 kb on + strand at 50.662 kb on + strand at 50.662 kb on + strand at 50.663 kb on - strand at 50.663 kb on - strand at 50.663 kb on - strand at 50.663 kb on - strand at 50.663 kb on - strand at 50.663 kb on - strand at 50.663 kb on - strand at 50.663 kb on - strand at 50.663 kb on - strand at 50.663 kb on - strand at 50.663 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 48,848 + Ac3H11_4745 0.38 -1.1 49,112 + Ac3H11_4745 0.72 -0.5 49,113 - Ac3H11_4745 0.72 -1.4 49,113 - Ac3H11_4745 0.72 -0.8 49,113 - Ac3H11_4745 0.72 +0.0 49,343 + Ac3H11_4746 0.28 +0.0 49,343 + Ac3H11_4746 0.28 +0.2 49,344 - Ac3H11_4746 0.29 -1.1 49,344 - Ac3H11_4746 0.29 +0.4 49,361 + Ac3H11_4746 0.40 +0.6 49,362 - Ac3H11_4746 0.40 -0.5 50,476 - +0.7 50,507 + +0.4 50,507 + -1.4 50,507 + +0.8 50,507 + -0.3 50,508 - -0.1 50,508 - +0.5 50,508 - +0.6 50,508 - +0.7 50,508 - -1.1 50,508 - -1.5 50,528 + +0.4 50,528 + +0.1 50,528 + -0.0 50,528 + -1.4 50,528 + -1.1 50,528 + +0.2 50,528 + +0.2 50,528 + -1.0 50,528 + -0.7 50,528 + +0.2 50,528 + +0.7 50,529 - +0.5 50,529 - -0.2 50,529 - -1.3 50,529 - -2.0 50,529 - +0.6 50,529 - -0.1 50,529 - -0.9 50,529 - -0.4 50,529 - +0.7 50,529 - -0.3 50,529 - +2.3 50,529 - +0.5 50,529 - -0.3 50,529 - +0.1 50,529 - +0.1 50,658 + -0.7 50,659 - -0.3 50,659 - -0.4 50,662 + -0.3 50,662 + -0.2 50,662 + +0.1 50,662 + -1.2 50,662 + -0.5 50,662 + -0.6 50,662 + -0.6 50,662 + +0.2 50,662 + -0.8 50,662 + +0.7 50,662 + -0.5 50,662 + -1.2 50,662 + -0.5 50,662 + +1.7 50,663 - +0.7 50,663 - +1.0 50,663 - +0.9 50,663 - +0.8 50,663 - -0.8 50,663 - +1.2 50,663 - +1.1 50,663 - +0.5 50,663 - -0.2 50,663 - -0.5 50,663 - +0.7
Or see this region's nucleotide sequence