Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_382 and Ac3H11_383 are separated by 305 nucleotides Ac3H11_383 and Ac3H11_384 are separated by 156 nucleotides
Ac3H11_382 - TrkA-N:Sodium/hydrogen exchanger, at 59,252 to 60,991
_382
Ac3H11_383 - FIG01198699: hypothetical protein, at 61,297 to 63,186
_383
Ac3H11_384 - possible endonuclease/exonuclease/phosphatase family protein, at 63,343 to 64,386
_384
Position (kb) 61
62
63
64 Strain fitness (log2 ratio) -2
-1
0
1
2 at 60.367 kb on - strand, within Ac3H11_382 at 60.554 kb on + strand, within Ac3H11_382 at 60.555 kb on - strand, within Ac3H11_382 at 60.564 kb on + strand, within Ac3H11_382 at 60.576 kb on + strand, within Ac3H11_382 at 60.576 kb on + strand at 60.576 kb on + strand, within Ac3H11_382 at 60.576 kb on + strand, within Ac3H11_382 at 60.576 kb on + strand, within Ac3H11_382 at 60.577 kb on - strand, within Ac3H11_382 at 60.687 kb on + strand, within Ac3H11_382 at 60.688 kb on - strand, within Ac3H11_382 at 60.868 kb on + strand at 60.868 kb on + strand at 60.869 kb on - strand at 60.869 kb on - strand at 60.869 kb on - strand at 60.869 kb on - strand at 60.879 kb on + strand at 60.879 kb on + strand at 60.879 kb on + strand at 60.880 kb on - strand at 60.880 kb on - strand at 60.880 kb on - strand at 61.298 kb on + strand at 61.298 kb on + strand at 61.299 kb on - strand at 61.299 kb on - strand at 61.382 kb on + strand at 61.382 kb on + strand at 61.382 kb on + strand at 61.382 kb on + strand at 61.382 kb on + strand at 61.382 kb on + strand at 61.382 kb on + strand at 61.382 kb on + strand at 61.382 kb on + strand at 61.382 kb on + strand at 61.383 kb on - strand at 61.383 kb on - strand at 61.383 kb on - strand at 61.383 kb on - strand at 61.383 kb on - strand at 61.451 kb on + strand at 61.451 kb on + strand at 61.451 kb on + strand at 61.451 kb on + strand at 61.451 kb on + strand at 61.451 kb on + strand at 61.451 kb on + strand at 61.451 kb on + strand at 61.451 kb on + strand at 61.451 kb on + strand at 61.451 kb on + strand at 61.451 kb on + strand at 61.451 kb on + strand at 61.452 kb on - strand at 61.452 kb on - strand at 61.452 kb on - strand at 61.452 kb on - strand at 61.452 kb on - strand at 61.452 kb on - strand at 61.452 kb on - strand at 61.452 kb on - strand at 61.452 kb on - strand at 61.452 kb on - strand at 61.452 kb on - strand at 61.452 kb on - strand at 61.452 kb on - strand at 61.452 kb on - strand at 61.581 kb on - strand, within Ac3H11_383 at 62.102 kb on + strand, within Ac3H11_383 at 62.102 kb on + strand, within Ac3H11_383 at 62.102 kb on + strand, within Ac3H11_383 at 62.102 kb on + strand, within Ac3H11_383 at 62.102 kb on + strand, within Ac3H11_383 at 62.102 kb on + strand, within Ac3H11_383 at 62.102 kb on + strand, within Ac3H11_383 at 62.102 kb on + strand, within Ac3H11_383 at 62.102 kb on + strand, within Ac3H11_383 at 62.102 kb on + strand, within Ac3H11_383 at 62.102 kb on + strand, within Ac3H11_383 at 62.103 kb on - strand, within Ac3H11_383 at 62.103 kb on - strand, within Ac3H11_383 at 62.103 kb on - strand, within Ac3H11_383 at 62.103 kb on - strand, within Ac3H11_383 at 62.103 kb on - strand, within Ac3H11_383 at 62.103 kb on - strand, within Ac3H11_383 at 62.103 kb on - strand, within Ac3H11_383 at 62.103 kb on - strand, within Ac3H11_383 at 62.103 kb on - strand, within Ac3H11_383 at 62.103 kb on - strand, within Ac3H11_383 at 62.103 kb on - strand, within Ac3H11_383 at 62.105 kb on + strand, within Ac3H11_383 at 62.105 kb on + strand, within Ac3H11_383 at 62.105 kb on + strand, within Ac3H11_383 at 62.105 kb on + strand, within Ac3H11_383 at 62.106 kb on - strand, within Ac3H11_383 at 62.106 kb on - strand, within Ac3H11_383 at 62.106 kb on - strand, within Ac3H11_383 at 62.106 kb on - strand, within Ac3H11_383 at 62.159 kb on + strand, within Ac3H11_383 at 62.195 kb on + strand, within Ac3H11_383 at 62.213 kb on + strand, within Ac3H11_383 at 62.213 kb on + strand, within Ac3H11_383 at 62.213 kb on + strand, within Ac3H11_383 at 62.213 kb on + strand, within Ac3H11_383 at 62.214 kb on - strand, within Ac3H11_383 at 62.214 kb on - strand, within Ac3H11_383 at 62.214 kb on - strand, within Ac3H11_383 at 62.214 kb on - strand, within Ac3H11_383 at 62.214 kb on - strand, within Ac3H11_383 at 62.214 kb on - strand, within Ac3H11_383 at 62.231 kb on + strand, within Ac3H11_383 at 62.279 kb on + strand, within Ac3H11_383 at 62.279 kb on + strand, within Ac3H11_383 at 62.279 kb on + strand, within Ac3H11_383 at 62.279 kb on + strand, within Ac3H11_383 at 62.279 kb on + strand, within Ac3H11_383 at 62.279 kb on + strand, within Ac3H11_383 at 62.279 kb on + strand, within Ac3H11_383 at 62.280 kb on - strand, within Ac3H11_383 at 62.280 kb on - strand, within Ac3H11_383 at 62.280 kb on - strand, within Ac3H11_383 at 62.280 kb on - strand, within Ac3H11_383 at 62.280 kb on - strand, within Ac3H11_383 at 62.280 kb on - strand, within Ac3H11_383 at 62.280 kb on - strand, within Ac3H11_383 at 62.280 kb on - strand, within Ac3H11_383 at 62.280 kb on - strand, within Ac3H11_383 at 62.280 kb on - strand, within Ac3H11_383 at 62.313 kb on - strand, within Ac3H11_383 at 62.313 kb on - strand, within Ac3H11_383 at 62.685 kb on + strand, within Ac3H11_383 at 62.685 kb on + strand, within Ac3H11_383 at 62.685 kb on + strand, within Ac3H11_383 at 62.686 kb on - strand, within Ac3H11_383 at 62.786 kb on + strand, within Ac3H11_383 at 62.786 kb on + strand, within Ac3H11_383 at 62.786 kb on + strand, within Ac3H11_383 at 62.786 kb on + strand, within Ac3H11_383 at 62.787 kb on - strand, within Ac3H11_383 at 62.787 kb on - strand, within Ac3H11_383 at 62.787 kb on - strand, within Ac3H11_383 at 62.787 kb on - strand, within Ac3H11_383 at 62.832 kb on - strand, within Ac3H11_383 at 62.832 kb on - strand, within Ac3H11_383 at 62.832 kb on - strand, within Ac3H11_383 at 63.235 kb on + strand at 63.235 kb on + strand at 63.235 kb on + strand at 63.235 kb on + strand at 63.235 kb on + strand at 63.235 kb on + strand at 63.235 kb on + strand at 63.235 kb on + strand at 63.236 kb on - strand at 63.236 kb on - strand at 63.236 kb on - strand at 63.236 kb on - strand at 63.236 kb on - strand at 63.236 kb on - strand at 63.238 kb on + strand at 63.238 kb on + strand at 63.238 kb on + strand at 63.238 kb on + strand at 63.238 kb on + strand at 63.238 kb on + strand at 63.238 kb on + strand at 63.238 kb on + strand at 63.239 kb on - strand at 63.239 kb on - strand at 63.239 kb on - strand at 63.263 kb on - strand at 63.270 kb on + strand at 63.270 kb on + strand at 63.271 kb on - strand at 63.271 kb on - strand at 63.271 kb on - strand at 63.344 kb on + strand at 63.345 kb on - strand at 63.455 kb on + strand, within Ac3H11_384 at 63.455 kb on + strand, within Ac3H11_384 at 63.455 kb on + strand, within Ac3H11_384 at 63.456 kb on - strand, within Ac3H11_384 at 63.456 kb on - strand, within Ac3H11_384 at 63.456 kb on - strand, within Ac3H11_384 at 63.456 kb on - strand, within Ac3H11_384 at 63.605 kb on + strand, within Ac3H11_384 at 63.605 kb on + strand, within Ac3H11_384 at 63.742 kb on + strand, within Ac3H11_384 at 63.742 kb on + strand, within Ac3H11_384 at 63.742 kb on + strand, within Ac3H11_384 at 63.742 kb on + strand, within Ac3H11_384 at 63.743 kb on - strand, within Ac3H11_384 at 63.743 kb on - strand, within Ac3H11_384 at 63.743 kb on - strand at 63.743 kb on - strand, within Ac3H11_384 at 64.036 kb on + strand, within Ac3H11_384 at 64.140 kb on - strand, within Ac3H11_384 at 64.140 kb on - strand, within Ac3H11_384
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 60,367 - Ac3H11_382 0.64 +0.8 60,554 + Ac3H11_382 0.75 +0.3 60,555 - Ac3H11_382 0.75 +0.7 60,564 + Ac3H11_382 0.75 +0.0 60,576 + Ac3H11_382 0.76 +1.8 60,576 + -0.3 60,576 + Ac3H11_382 0.76 +0.2 60,576 + Ac3H11_382 0.76 +1.4 60,576 + Ac3H11_382 0.76 +0.5 60,577 - Ac3H11_382 0.76 +0.2 60,687 + Ac3H11_382 0.82 -0.5 60,688 - Ac3H11_382 0.83 -0.6 60,868 + +0.3 60,868 + +0.3 60,869 - -0.0 60,869 - -0.0 60,869 - -1.3 60,869 - +0.3 60,879 + +1.3 60,879 + -0.9 60,879 + +0.7 60,880 - +1.6 60,880 - -1.0 60,880 - +0.5 61,298 + -1.1 61,298 + +0.5 61,299 - -0.6 61,299 - +0.3 61,382 + -0.7 61,382 + -1.0 61,382 + +0.3 61,382 + -0.6 61,382 + +0.4 61,382 + +0.9 61,382 + -0.6 61,382 + +1.1 61,382 + -0.4 61,382 + +0.5 61,383 - +0.8 61,383 - +0.6 61,383 - +0.1 61,383 - +1.2 61,383 - -0.5 61,451 + +1.3 61,451 + +0.7 61,451 + -0.0 61,451 + +0.3 61,451 + +0.5 61,451 + +0.7 61,451 + -0.3 61,451 + -0.6 61,451 + -0.3 61,451 + -0.2 61,451 + -0.5 61,451 + +0.7 61,451 + -0.7 61,452 - +1.3 61,452 - +2.4 61,452 - +0.0 61,452 - -0.5 61,452 - +1.4 61,452 - -0.3 61,452 - +0.5 61,452 - +1.0 61,452 - +0.5 61,452 - -0.2 61,452 - +1.7 61,452 - +0.4 61,452 - -0.5 61,452 - +1.0 61,581 - Ac3H11_383 0.15 -0.1 62,102 + Ac3H11_383 0.43 -0.1 62,102 + Ac3H11_383 0.43 +0.9 62,102 + Ac3H11_383 0.43 -0.0 62,102 + Ac3H11_383 0.43 +0.1 62,102 + Ac3H11_383 0.43 +0.4 62,102 + Ac3H11_383 0.43 +1.1 62,102 + Ac3H11_383 0.43 +0.5 62,102 + Ac3H11_383 0.43 +0.4 62,102 + Ac3H11_383 0.43 -0.4 62,102 + Ac3H11_383 0.43 +0.0 62,102 + Ac3H11_383 0.43 +0.2 62,103 - Ac3H11_383 0.43 +0.7 62,103 - Ac3H11_383 0.43 -0.3 62,103 - Ac3H11_383 0.43 +0.6 62,103 - Ac3H11_383 0.43 +0.9 62,103 - Ac3H11_383 0.43 +0.1 62,103 - Ac3H11_383 0.43 +1.8 62,103 - Ac3H11_383 0.43 -0.0 62,103 - Ac3H11_383 0.43 -0.4 62,103 - Ac3H11_383 0.43 -0.5 62,103 - Ac3H11_383 0.43 -0.6 62,103 - Ac3H11_383 0.43 +0.7 62,105 + Ac3H11_383 0.43 -0.4 62,105 + Ac3H11_383 0.43 +0.5 62,105 + Ac3H11_383 0.43 +0.1 62,105 + Ac3H11_383 0.43 +1.3 62,106 - Ac3H11_383 0.43 -0.4 62,106 - Ac3H11_383 0.43 -1.1 62,106 - Ac3H11_383 0.43 +0.4 62,106 - Ac3H11_383 0.43 +0.7 62,159 + Ac3H11_383 0.46 +1.1 62,195 + Ac3H11_383 0.48 -1.2 62,213 + Ac3H11_383 0.48 -0.2 62,213 + Ac3H11_383 0.48 -0.1 62,213 + Ac3H11_383 0.48 +1.6 62,213 + Ac3H11_383 0.48 +0.3 62,214 - Ac3H11_383 0.49 -0.3 62,214 - Ac3H11_383 0.49 +0.4 62,214 - Ac3H11_383 0.49 +0.9 62,214 - Ac3H11_383 0.49 +0.2 62,214 - Ac3H11_383 0.49 +1.8 62,214 - Ac3H11_383 0.49 -0.1 62,231 + Ac3H11_383 0.49 -0.2 62,279 + Ac3H11_383 0.52 +0.7 62,279 + Ac3H11_383 0.52 +0.1 62,279 + Ac3H11_383 0.52 +1.0 62,279 + Ac3H11_383 0.52 -0.3 62,279 + Ac3H11_383 0.52 +0.5 62,279 + Ac3H11_383 0.52 +0.8 62,279 + Ac3H11_383 0.52 -0.0 62,280 - Ac3H11_383 0.52 -0.7 62,280 - Ac3H11_383 0.52 -0.5 62,280 - Ac3H11_383 0.52 +0.2 62,280 - Ac3H11_383 0.52 -0.1 62,280 - Ac3H11_383 0.52 -0.4 62,280 - Ac3H11_383 0.52 +0.1 62,280 - Ac3H11_383 0.52 +0.5 62,280 - Ac3H11_383 0.52 +0.4 62,280 - Ac3H11_383 0.52 +0.2 62,280 - Ac3H11_383 0.52 +0.3 62,313 - Ac3H11_383 0.54 +0.3 62,313 - Ac3H11_383 0.54 -0.4 62,685 + Ac3H11_383 0.73 +0.1 62,685 + Ac3H11_383 0.73 -0.6 62,685 + Ac3H11_383 0.73 +0.7 62,686 - Ac3H11_383 0.73 -0.3 62,786 + Ac3H11_383 0.79 -0.6 62,786 + Ac3H11_383 0.79 +0.2 62,786 + Ac3H11_383 0.79 +0.9 62,786 + Ac3H11_383 0.79 +0.4 62,787 - Ac3H11_383 0.79 -0.8 62,787 - Ac3H11_383 0.79 -0.2 62,787 - Ac3H11_383 0.79 +0.3 62,787 - Ac3H11_383 0.79 -0.0 62,832 - Ac3H11_383 0.81 -0.5 62,832 - Ac3H11_383 0.81 +0.3 62,832 - Ac3H11_383 0.81 -1.3 63,235 + +0.4 63,235 + -0.2 63,235 + -1.0 63,235 + +0.6 63,235 + +0.1 63,235 + +0.6 63,235 + +0.2 63,235 + -0.1 63,236 - +0.3 63,236 - +0.6 63,236 - -0.6 63,236 - -0.4 63,236 - +0.7 63,236 - -2.0 63,238 + +0.6 63,238 + -0.2 63,238 + +0.2 63,238 + +1.0 63,238 + +0.3 63,238 + +0.5 63,238 + -0.4 63,238 + -0.2 63,239 - +0.7 63,239 - -0.5 63,239 - -1.0 63,263 - +0.8 63,270 + -0.1 63,270 + -0.6 63,271 - +0.3 63,271 - -0.3 63,271 - -0.3 63,344 + +0.3 63,345 - -0.9 63,455 + Ac3H11_384 0.11 -0.1 63,455 + Ac3H11_384 0.11 +0.0 63,455 + Ac3H11_384 0.11 +0.1 63,456 - Ac3H11_384 0.11 -0.6 63,456 - Ac3H11_384 0.11 -0.9 63,456 - Ac3H11_384 0.11 -2.0 63,456 - Ac3H11_384 0.11 -0.2 63,605 + Ac3H11_384 0.25 +0.3 63,605 + Ac3H11_384 0.25 -0.0 63,742 + Ac3H11_384 0.38 +0.0 63,742 + Ac3H11_384 0.38 +0.1 63,742 + Ac3H11_384 0.38 -1.0 63,742 + Ac3H11_384 0.38 +0.3 63,743 - Ac3H11_384 0.38 +1.1 63,743 - Ac3H11_384 0.38 +0.1 63,743 - +1.8 63,743 - Ac3H11_384 0.38 -0.1 64,036 + Ac3H11_384 0.66 +0.3 64,140 - Ac3H11_384 0.76 +0.5 64,140 - Ac3H11_384 0.76 +0.1
Or see this region's nucleotide sequence