Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3682 and Ac3H11_3683 are separated by 586 nucleotides
Ac3H11_3682 - hypothetical protein, at 37,368 to 37,865
_3682
Ac3H11_3683 - Integrase, at 38,452 to 39,783
_3683
Position (kb) 38
39
40 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 37.617 kb on + strand, within Ac3H11_3682 at 37.618 kb on - strand, within Ac3H11_3682 at 37.660 kb on - strand, within Ac3H11_3682 at 37.713 kb on + strand, within Ac3H11_3682 at 37.713 kb on + strand, within Ac3H11_3682 at 37.714 kb on - strand, within Ac3H11_3682 at 37.758 kb on + strand, within Ac3H11_3682 at 37.759 kb on - strand, within Ac3H11_3682 at 37.759 kb on - strand, within Ac3H11_3682 at 37.830 kb on + strand at 37.830 kb on + strand at 37.830 kb on + strand at 37.831 kb on - strand at 37.831 kb on - strand at 37.831 kb on - strand at 37.831 kb on - strand at 37.831 kb on - strand at 37.851 kb on + strand at 37.851 kb on + strand at 37.867 kb on + strand at 37.867 kb on + strand at 37.867 kb on + strand at 37.868 kb on - strand at 37.868 kb on - strand at 37.868 kb on - strand at 37.868 kb on - strand at 37.868 kb on - strand at 38.079 kb on + strand at 38.234 kb on + strand at 38.234 kb on + strand at 38.235 kb on - strand at 38.235 kb on - strand at 38.235 kb on - strand at 38.235 kb on - strand at 38.353 kb on + strand at 38.353 kb on + strand at 38.354 kb on - strand at 38.354 kb on - strand at 38.395 kb on - strand at 38.395 kb on - strand at 38.395 kb on - strand at 38.395 kb on - strand at 38.402 kb on + strand at 38.402 kb on + strand at 38.402 kb on + strand at 38.402 kb on + strand at 38.402 kb on + strand at 38.402 kb on + strand at 38.402 kb on + strand at 38.402 kb on + strand at 38.402 kb on + strand at 38.402 kb on + strand at 38.402 kb on + strand at 38.402 kb on + strand at 38.403 kb on - strand at 38.403 kb on - strand at 38.403 kb on - strand at 38.403 kb on - strand at 38.403 kb on - strand at 38.403 kb on - strand at 38.403 kb on - strand at 38.403 kb on - strand at 38.403 kb on - strand at 38.403 kb on - strand at 38.564 kb on - strand at 38.564 kb on - strand at 38.564 kb on - strand at 38.564 kb on - strand at 38.564 kb on - strand at 38.591 kb on - strand, within Ac3H11_3683 at 38.632 kb on + strand, within Ac3H11_3683 at 38.792 kb on - strand, within Ac3H11_3683 at 38.792 kb on - strand, within Ac3H11_3683 at 38.859 kb on + strand, within Ac3H11_3683 at 38.859 kb on + strand, within Ac3H11_3683 at 38.859 kb on + strand, within Ac3H11_3683 at 38.863 kb on + strand, within Ac3H11_3683 at 38.863 kb on + strand, within Ac3H11_3683 at 38.863 kb on + strand, within Ac3H11_3683 at 38.863 kb on + strand, within Ac3H11_3683 at 38.863 kb on + strand, within Ac3H11_3683 at 38.863 kb on + strand, within Ac3H11_3683 at 38.863 kb on + strand, within Ac3H11_3683 at 38.863 kb on + strand, within Ac3H11_3683 at 38.863 kb on + strand, within Ac3H11_3683 at 38.864 kb on - strand, within Ac3H11_3683 at 38.864 kb on - strand, within Ac3H11_3683 at 38.864 kb on - strand, within Ac3H11_3683 at 38.864 kb on - strand, within Ac3H11_3683 at 38.864 kb on - strand, within Ac3H11_3683 at 38.864 kb on - strand, within Ac3H11_3683 at 38.864 kb on - strand, within Ac3H11_3683 at 38.864 kb on - strand, within Ac3H11_3683 at 38.864 kb on - strand, within Ac3H11_3683 at 38.903 kb on + strand, within Ac3H11_3683 at 38.903 kb on + strand, within Ac3H11_3683 at 38.903 kb on + strand, within Ac3H11_3683 at 38.904 kb on - strand, within Ac3H11_3683 at 38.904 kb on - strand, within Ac3H11_3683 at 38.904 kb on - strand, within Ac3H11_3683 at 38.904 kb on - strand, within Ac3H11_3683 at 39.138 kb on - strand, within Ac3H11_3683 at 39.188 kb on + strand, within Ac3H11_3683 at 39.189 kb on - strand, within Ac3H11_3683 at 39.189 kb on - strand, within Ac3H11_3683 at 39.266 kb on + strand, within Ac3H11_3683 at 39.397 kb on + strand, within Ac3H11_3683 at 39.397 kb on + strand, within Ac3H11_3683 at 39.397 kb on + strand, within Ac3H11_3683 at 39.397 kb on + strand, within Ac3H11_3683 at 39.397 kb on + strand, within Ac3H11_3683 at 39.397 kb on + strand, within Ac3H11_3683 at 39.397 kb on + strand, within Ac3H11_3683 at 39.397 kb on + strand, within Ac3H11_3683 at 39.398 kb on - strand, within Ac3H11_3683 at 39.398 kb on - strand, within Ac3H11_3683 at 39.398 kb on - strand, within Ac3H11_3683 at 39.398 kb on - strand, within Ac3H11_3683 at 39.398 kb on - strand, within Ac3H11_3683 at 39.398 kb on - strand, within Ac3H11_3683 at 39.398 kb on - strand, within Ac3H11_3683 at 39.398 kb on - strand, within Ac3H11_3683 at 39.398 kb on - strand, within Ac3H11_3683 at 39.398 kb on - strand, within Ac3H11_3683 at 39.401 kb on + strand, within Ac3H11_3683 at 39.401 kb on + strand, within Ac3H11_3683 at 39.401 kb on + strand, within Ac3H11_3683 at 39.402 kb on - strand, within Ac3H11_3683 at 39.402 kb on - strand, within Ac3H11_3683 at 39.402 kb on - strand, within Ac3H11_3683 at 39.402 kb on - strand, within Ac3H11_3683 at 39.402 kb on - strand, within Ac3H11_3683 at 39.402 kb on - strand, within Ac3H11_3683 at 39.483 kb on - strand, within Ac3H11_3683 at 39.516 kb on + strand, within Ac3H11_3683 at 39.516 kb on + strand, within Ac3H11_3683 at 39.671 kb on - strand at 39.671 kb on - strand at 39.696 kb on + strand at 39.696 kb on + strand at 39.696 kb on + strand at 39.696 kb on + strand at 39.781 kb on + strand at 39.782 kb on - strand at 39.782 kb on - strand at 39.792 kb on + strand at 39.793 kb on - strand at 39.793 kb on - strand at 39.793 kb on - strand at 39.856 kb on + strand at 39.886 kb on - strand at 39.901 kb on + strand at 39.901 kb on + strand at 39.901 kb on + strand at 40.101 kb on + strand at 40.101 kb on + strand at 40.101 kb on + strand at 40.102 kb on - strand at 40.102 kb on - strand at 40.102 kb on - strand at 40.258 kb on + strand at 40.258 kb on + strand at 40.259 kb on - strand at 40.259 kb on - strand at 40.259 kb on - strand at 40.259 kb on - strand at 40.266 kb on + strand at 40.266 kb on + strand at 40.266 kb on + strand at 40.281 kb on + strand at 40.281 kb on + strand at 40.282 kb on - strand at 40.282 kb on - strand at 40.282 kb on - strand at 40.282 kb on - strand at 40.290 kb on + strand at 40.290 kb on + strand at 40.290 kb on + strand at 40.473 kb on + strand at 40.474 kb on - strand at 40.474 kb on - strand at 40.474 kb on - strand at 40.492 kb on + strand at 40.492 kb on + strand at 40.492 kb on + strand at 40.492 kb on + strand at 40.592 kb on + strand at 40.593 kb on - strand at 40.593 kb on - strand at 40.593 kb on - strand at 40.606 kb on + strand at 40.607 kb on - strand at 40.607 kb on - strand at 40.610 kb on + strand at 40.610 kb on + strand at 40.610 kb on + strand at 40.610 kb on + strand at 40.610 kb on + strand at 40.610 kb on + strand at 40.610 kb on + strand at 40.610 kb on + strand at 40.610 kb on + strand at 40.611 kb on - strand at 40.611 kb on - strand at 40.611 kb on - strand at 40.611 kb on - strand at 40.611 kb on - strand at 40.611 kb on - strand at 40.611 kb on - strand at 40.611 kb on - strand at 40.611 kb on - strand at 40.611 kb on - strand at 40.611 kb on - strand at 40.611 kb on - strand at 40.611 kb on - strand at 40.611 kb on - strand at 40.617 kb on - strand at 40.654 kb on + strand at 40.654 kb on + strand at 40.738 kb on + strand at 40.739 kb on - strand at 40.739 kb on - strand at 40.739 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 37,617 + Ac3H11_3682 0.50 +0.5 37,618 - Ac3H11_3682 0.50 -2.9 37,660 - Ac3H11_3682 0.59 -0.9 37,713 + Ac3H11_3682 0.69 -0.5 37,713 + Ac3H11_3682 0.69 -0.9 37,714 - Ac3H11_3682 0.69 -1.8 37,758 + Ac3H11_3682 0.78 +0.8 37,759 - Ac3H11_3682 0.79 +0.5 37,759 - Ac3H11_3682 0.79 -0.9 37,830 + +0.3 37,830 + -1.2 37,830 + +0.6 37,831 - -0.1 37,831 - +1.3 37,831 - +0.5 37,831 - -0.4 37,831 - +0.2 37,851 + -0.5 37,851 + +1.3 37,867 + +0.1 37,867 + +0.3 37,867 + +0.0 37,868 - -0.4 37,868 - +0.4 37,868 - +0.5 37,868 - -0.9 37,868 - -0.3 38,079 + -0.8 38,234 + +0.3 38,234 + +0.7 38,235 - +0.2 38,235 - -0.7 38,235 - -0.5 38,235 - -1.1 38,353 + -1.8 38,353 + -0.5 38,354 - -1.2 38,354 - +0.5 38,395 - +0.4 38,395 - +0.9 38,395 - +1.0 38,395 - -0.2 38,402 + +2.1 38,402 + -0.9 38,402 + +1.0 38,402 + +0.2 38,402 + +0.1 38,402 + -0.7 38,402 + +1.2 38,402 + -0.3 38,402 + +0.2 38,402 + -0.1 38,402 + -1.5 38,402 + -0.3 38,403 - -0.5 38,403 - -0.3 38,403 - -0.4 38,403 - +0.2 38,403 - +0.9 38,403 - +0.1 38,403 - +0.6 38,403 - +0.0 38,403 - -0.4 38,403 - -0.8 38,564 - -1.8 38,564 - -2.8 38,564 - -0.7 38,564 - +0.4 38,564 - -0.6 38,591 - Ac3H11_3683 0.10 -0.7 38,632 + Ac3H11_3683 0.14 +1.1 38,792 - Ac3H11_3683 0.26 -0.2 38,792 - Ac3H11_3683 0.26 +0.0 38,859 + Ac3H11_3683 0.31 +0.4 38,859 + Ac3H11_3683 0.31 -0.3 38,859 + Ac3H11_3683 0.31 +0.4 38,863 + Ac3H11_3683 0.31 +1.2 38,863 + Ac3H11_3683 0.31 +1.2 38,863 + Ac3H11_3683 0.31 -0.0 38,863 + Ac3H11_3683 0.31 +0.4 38,863 + Ac3H11_3683 0.31 -0.2 38,863 + Ac3H11_3683 0.31 -0.0 38,863 + Ac3H11_3683 0.31 -1.7 38,863 + Ac3H11_3683 0.31 -0.3 38,863 + Ac3H11_3683 0.31 -0.3 38,864 - Ac3H11_3683 0.31 +0.6 38,864 - Ac3H11_3683 0.31 +0.3 38,864 - Ac3H11_3683 0.31 -0.8 38,864 - Ac3H11_3683 0.31 +0.9 38,864 - Ac3H11_3683 0.31 +0.0 38,864 - Ac3H11_3683 0.31 +1.0 38,864 - Ac3H11_3683 0.31 +1.7 38,864 - Ac3H11_3683 0.31 +0.2 38,864 - Ac3H11_3683 0.31 +0.2 38,903 + Ac3H11_3683 0.34 +0.1 38,903 + Ac3H11_3683 0.34 +1.0 38,903 + Ac3H11_3683 0.34 -0.8 38,904 - Ac3H11_3683 0.34 -1.7 38,904 - Ac3H11_3683 0.34 -0.1 38,904 - Ac3H11_3683 0.34 +1.3 38,904 - Ac3H11_3683 0.34 +0.4 39,138 - Ac3H11_3683 0.52 -0.9 39,188 + Ac3H11_3683 0.55 +0.2 39,189 - Ac3H11_3683 0.55 -0.4 39,189 - Ac3H11_3683 0.55 +0.7 39,266 + Ac3H11_3683 0.61 +0.2 39,397 + Ac3H11_3683 0.71 +0.3 39,397 + Ac3H11_3683 0.71 -2.0 39,397 + Ac3H11_3683 0.71 -0.4 39,397 + Ac3H11_3683 0.71 +0.7 39,397 + Ac3H11_3683 0.71 +0.8 39,397 + Ac3H11_3683 0.71 +0.0 39,397 + Ac3H11_3683 0.71 -0.1 39,397 + Ac3H11_3683 0.71 +0.9 39,398 - Ac3H11_3683 0.71 +0.5 39,398 - Ac3H11_3683 0.71 -0.1 39,398 - Ac3H11_3683 0.71 +0.2 39,398 - Ac3H11_3683 0.71 -1.7 39,398 - Ac3H11_3683 0.71 +0.5 39,398 - Ac3H11_3683 0.71 +0.3 39,398 - Ac3H11_3683 0.71 +1.0 39,398 - Ac3H11_3683 0.71 -0.6 39,398 - Ac3H11_3683 0.71 -0.1 39,398 - Ac3H11_3683 0.71 -0.9 39,401 + Ac3H11_3683 0.71 -1.5 39,401 + Ac3H11_3683 0.71 -0.8 39,401 + Ac3H11_3683 0.71 -1.0 39,402 - Ac3H11_3683 0.71 -0.6 39,402 - Ac3H11_3683 0.71 +0.4 39,402 - Ac3H11_3683 0.71 -0.0 39,402 - Ac3H11_3683 0.71 +0.4 39,402 - Ac3H11_3683 0.71 +0.5 39,402 - Ac3H11_3683 0.71 +0.3 39,483 - Ac3H11_3683 0.77 -1.0 39,516 + Ac3H11_3683 0.80 -0.7 39,516 + Ac3H11_3683 0.80 -0.5 39,671 - -1.3 39,671 - +1.6 39,696 + -0.1 39,696 + -1.1 39,696 + -1.7 39,696 + -0.6 39,781 + +0.2 39,782 - -0.7 39,782 - -0.5 39,792 + -1.4 39,793 - -0.3 39,793 - -0.6 39,793 - +1.4 39,856 + -0.2 39,886 - -0.1 39,901 + -0.0 39,901 + -0.4 39,901 + -1.0 40,101 + +0.8 40,101 + +0.6 40,101 + -0.7 40,102 - -0.1 40,102 - +0.9 40,102 - -1.4 40,258 + +0.6 40,258 + -0.2 40,259 - +0.1 40,259 - -0.2 40,259 - +0.4 40,259 - +1.2 40,266 + -1.4 40,266 + -0.1 40,266 + -0.8 40,281 + -0.7 40,281 + +0.5 40,282 - -0.5 40,282 - -1.3 40,282 - +0.4 40,282 - +1.0 40,290 + +0.1 40,290 + +0.4 40,290 + +0.7 40,473 + -0.3 40,474 - -1.8 40,474 - +0.5 40,474 - +0.3 40,492 + +0.4 40,492 + +1.0 40,492 + +0.4 40,492 + +1.0 40,592 + -0.3 40,593 - -1.0 40,593 - -0.5 40,593 - -0.0 40,606 + +0.5 40,607 - -0.9 40,607 - +0.1 40,610 + -0.1 40,610 + +0.5 40,610 + +0.3 40,610 + -0.9 40,610 + -0.1 40,610 + +1.0 40,610 + +0.9 40,610 + -0.5 40,610 + +0.1 40,611 - +2.2 40,611 - -0.2 40,611 - -0.1 40,611 - -1.3 40,611 - +0.4 40,611 - -0.9 40,611 - +0.9 40,611 - +0.3 40,611 - +0.4 40,611 - -0.6 40,611 - +0.6 40,611 - +0.7 40,611 - +0.0 40,611 - -0.4 40,617 - +1.3 40,654 + +0.2 40,654 + +0.5 40,738 + -0.7 40,739 - -1.7 40,739 - -1.0 40,739 - +0.7
Or see this region's nucleotide sequence