Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3527 and Ac3H11_3528 are separated by 541 nucleotides Ac3H11_3528 and Ac3H11_3529 are separated by 115 nucleotides
Ac3H11_3527 - hypothetical protein, at 72,440 to 72,925
_3527
Ac3H11_3528 - 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78), at 73,467 to 74,030
_3528
Ac3H11_3529 - Methyl-accepting chemotaxis protein I (serine chemoreceptor protein), at 74,146 to 75,741
_3529
Position (kb) 73
74
75 Strain fitness (log2 ratio) -2
-1
0
1 at 73.109 kb on - strand at 73.109 kb on - strand at 73.187 kb on - strand at 73.372 kb on - strand at 73.488 kb on - strand at 73.488 kb on - strand at 73.488 kb on - strand at 73.755 kb on + strand, within Ac3H11_3528 at 73.755 kb on + strand, within Ac3H11_3528 at 73.756 kb on - strand, within Ac3H11_3528 at 73.756 kb on - strand, within Ac3H11_3528 at 73.950 kb on + strand, within Ac3H11_3528 at 73.951 kb on - strand, within Ac3H11_3528 at 73.951 kb on - strand, within Ac3H11_3528 at 73.951 kb on - strand, within Ac3H11_3528 at 73.951 kb on - strand, within Ac3H11_3528 at 74.092 kb on + strand at 74.135 kb on + strand at 74.136 kb on - strand at 74.136 kb on - strand at 74.137 kb on + strand at 74.137 kb on + strand at 74.177 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 73,109 - -0.1 73,109 - +0.9 73,187 - +0.8 73,372 - +0.2 73,488 - +0.7 73,488 - +0.1 73,488 - -0.4 73,755 + Ac3H11_3528 0.51 -1.9 73,755 + Ac3H11_3528 0.51 +0.3 73,756 - Ac3H11_3528 0.51 +0.3 73,756 - Ac3H11_3528 0.51 -0.0 73,950 + Ac3H11_3528 0.86 +0.1 73,951 - Ac3H11_3528 0.86 -0.4 73,951 - Ac3H11_3528 0.86 +0.3 73,951 - Ac3H11_3528 0.86 +0.4 73,951 - Ac3H11_3528 0.86 +0.7 74,092 + -0.0 74,135 + -2.0 74,136 - +0.6 74,136 - -0.2 74,137 + +0.5 74,137 + -1.3 74,177 - +0.7
Or see this region's nucleotide sequence