Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS23980 and AZOBR_RS23985 are separated by 171 nucleotides AZOBR_RS23985 and AZOBR_RS23990 are separated by 56 nucleotides AZOBR_RS23990 and AZOBR_RS23995 are separated by 206 nucleotides AZOBR_RS23995 and AZOBR_RS24000 are separated by 9 nucleotides
AZOBR_RS23980: AZOBR_RS23980 - Fis family transcriptional regulator, at 412,142 to 412,840
_RS23980
AZOBR_RS23985: AZOBR_RS23985 - membrane protein, at 413,012 to 413,665
_RS23985
AZOBR_RS23990: AZOBR_RS23990 - ferredoxin, at 413,722 to 415,422
_RS23990
AZOBR_RS23995: AZOBR_RS23995 - Crp/Fnr family transcriptional regulator, at 415,629 to 416,279
_RS23995
AZOBR_RS24000: AZOBR_RS24000 - polyprenyl-pyrophosphate binding protein, at 416,289 to 416,867
_RS24000
Position (kb) 413
414
415
416 Strain fitness (log2 ratio) -2
-1
0
1 at 412.728 kb on - strand, within AZOBR_RS23980 at 412.728 kb on - strand, within AZOBR_RS23980 at 412.739 kb on + strand, within AZOBR_RS23980 at 412.739 kb on + strand, within AZOBR_RS23980 at 412.740 kb on - strand, within AZOBR_RS23980 at 412.740 kb on - strand, within AZOBR_RS23980 at 412.740 kb on - strand, within AZOBR_RS23980 at 412.740 kb on - strand, within AZOBR_RS23980 at 412.740 kb on - strand, within AZOBR_RS23980 at 413.009 kb on + strand at 413.012 kb on - strand at 413.600 kb on + strand at 413.600 kb on + strand at 413.600 kb on + strand at 413.600 kb on + strand at 413.600 kb on + strand at 413.600 kb on + strand at 413.600 kb on + strand at 413.601 kb on - strand at 413.601 kb on - strand at 413.601 kb on - strand at 413.601 kb on - strand at 413.601 kb on - strand at 413.601 kb on - strand at 413.601 kb on - strand at 414.725 kb on + strand, within AZOBR_RS23990 at 414.725 kb on + strand, within AZOBR_RS23990 at 414.725 kb on + strand, within AZOBR_RS23990 at 414.725 kb on + strand, within AZOBR_RS23990 at 414.725 kb on + strand, within AZOBR_RS23990 at 414.725 kb on + strand, within AZOBR_RS23990 at 414.726 kb on - strand, within AZOBR_RS23990 at 414.726 kb on - strand, within AZOBR_RS23990 at 414.726 kb on - strand, within AZOBR_RS23990 at 414.726 kb on - strand, within AZOBR_RS23990 at 414.726 kb on - strand, within AZOBR_RS23990 at 414.726 kb on - strand, within AZOBR_RS23990 at 414.726 kb on - strand, within AZOBR_RS23990 at 415.046 kb on + strand, within AZOBR_RS23990 at 415.047 kb on - strand, within AZOBR_RS23990 at 415.085 kb on + strand, within AZOBR_RS23990 at 415.085 kb on + strand, within AZOBR_RS23990 at 415.533 kb on + strand at 415.533 kb on + strand at 415.533 kb on + strand at 415.533 kb on + strand at 415.533 kb on + strand at 415.534 kb on + strand at 415.534 kb on - strand at 415.534 kb on - strand at 415.534 kb on - strand at 415.669 kb on + strand at 415.670 kb on - strand at 416.290 kb on + strand at 416.291 kb on - strand at 416.291 kb on - strand at 416.291 kb on - strand at 416.353 kb on + strand, within AZOBR_RS24000 at 416.353 kb on + strand, within AZOBR_RS24000 at 416.354 kb on - strand, within AZOBR_RS24000 at 416.354 kb on - strand, within AZOBR_RS24000
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 412,728 - AZOBR_RS23980 0.84 +0.9 412,728 - AZOBR_RS23980 0.84 +0.6 412,739 + AZOBR_RS23980 0.85 +0.5 412,739 + AZOBR_RS23980 0.85 -0.0 412,740 - AZOBR_RS23980 0.86 +0.3 412,740 - AZOBR_RS23980 0.86 +0.3 412,740 - AZOBR_RS23980 0.86 -0.6 412,740 - AZOBR_RS23980 0.86 -0.1 412,740 - AZOBR_RS23980 0.86 +1.4 413,009 + +0.5 413,012 - -0.8 413,600 + -0.7 413,600 + +0.2 413,600 + -0.5 413,600 + -0.1 413,600 + +0.1 413,600 + +0.1 413,600 + +0.2 413,601 - -0.3 413,601 - -0.1 413,601 - +0.1 413,601 - -2.2 413,601 - -0.5 413,601 - +0.3 413,601 - -0.1 414,725 + AZOBR_RS23990 0.59 +0.0 414,725 + AZOBR_RS23990 0.59 -2.4 414,725 + AZOBR_RS23990 0.59 +0.2 414,725 + AZOBR_RS23990 0.59 -0.2 414,725 + AZOBR_RS23990 0.59 -1.1 414,725 + AZOBR_RS23990 0.59 -1.1 414,726 - AZOBR_RS23990 0.59 -0.3 414,726 - AZOBR_RS23990 0.59 +0.1 414,726 - AZOBR_RS23990 0.59 +0.2 414,726 - AZOBR_RS23990 0.59 +0.7 414,726 - AZOBR_RS23990 0.59 -0.7 414,726 - AZOBR_RS23990 0.59 +0.2 414,726 - AZOBR_RS23990 0.59 -0.1 415,046 + AZOBR_RS23990 0.78 -0.5 415,047 - AZOBR_RS23990 0.78 -0.1 415,085 + AZOBR_RS23990 0.80 -0.8 415,085 + AZOBR_RS23990 0.80 -0.0 415,533 + +0.1 415,533 + -0.5 415,533 + -0.1 415,533 + -0.1 415,533 + +0.3 415,534 + +0.1 415,534 - +0.2 415,534 - +0.6 415,534 - +0.2 415,669 + +0.5 415,670 - +0.1 416,290 + -0.3 416,291 - -0.2 416,291 - -0.1 416,291 - -0.1 416,353 + AZOBR_RS24000 0.11 -0.3 416,353 + AZOBR_RS24000 0.11 +0.0 416,354 - AZOBR_RS24000 0.11 -0.9 416,354 - AZOBR_RS24000 0.11 +0.4
Or see this region's nucleotide sequence