Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS23965 and AZOBR_RS23970 are separated by 10 nucleotides AZOBR_RS23970 and AZOBR_RS23975 are separated by 86 nucleotides AZOBR_RS23975 and AZOBR_RS23980 overlap by 4 nucleotides AZOBR_RS23980 and AZOBR_RS23985 are separated by 171 nucleotides
AZOBR_RS23965: AZOBR_RS23965 - potassium-transporting ATPase subunit B, at 406,551 to 408,680
_RS23965
AZOBR_RS23970: AZOBR_RS23970 - ATPase, at 408,691 to 409,299
_RS23970
AZOBR_RS23975: AZOBR_RS23975 - histidine kinase, at 409,386 to 412,145
_RS23975
AZOBR_RS23980: AZOBR_RS23980 - Fis family transcriptional regulator, at 412,142 to 412,840
_RS23980
AZOBR_RS23985: AZOBR_RS23985 - membrane protein, at 413,012 to 413,665
_RS23985
Position (kb) 409
410
411
412
413 Strain fitness (log2 ratio) -1
0
1
2 at 408.390 kb on + strand, within AZOBR_RS23965 at 408.391 kb on - strand, within AZOBR_RS23965 at 408.391 kb on - strand, within AZOBR_RS23965 at 408.427 kb on - strand, within AZOBR_RS23965 at 408.427 kb on - strand, within AZOBR_RS23965 at 408.600 kb on + strand at 408.601 kb on - strand at 408.601 kb on - strand at 408.883 kb on + strand, within AZOBR_RS23970 at 408.884 kb on - strand, within AZOBR_RS23970 at 408.955 kb on + strand, within AZOBR_RS23970 at 409.297 kb on + strand at 409.512 kb on + strand at 409.650 kb on + strand at 409.650 kb on + strand at 409.651 kb on - strand at 409.651 kb on - strand at 409.770 kb on + strand, within AZOBR_RS23975 at 409.770 kb on + strand, within AZOBR_RS23975 at 409.771 kb on - strand, within AZOBR_RS23975 at 409.812 kb on + strand, within AZOBR_RS23975 at 409.813 kb on - strand, within AZOBR_RS23975 at 409.986 kb on + strand, within AZOBR_RS23975 at 409.986 kb on + strand, within AZOBR_RS23975 at 409.987 kb on - strand, within AZOBR_RS23975 at 410.022 kb on + strand, within AZOBR_RS23975 at 410.022 kb on + strand, within AZOBR_RS23975 at 410.022 kb on + strand, within AZOBR_RS23975 at 410.022 kb on + strand, within AZOBR_RS23975 at 410.022 kb on + strand, within AZOBR_RS23975 at 410.023 kb on - strand, within AZOBR_RS23975 at 410.023 kb on - strand, within AZOBR_RS23975 at 410.023 kb on - strand, within AZOBR_RS23975 at 410.023 kb on - strand, within AZOBR_RS23975 at 410.388 kb on + strand, within AZOBR_RS23975 at 410.799 kb on + strand, within AZOBR_RS23975 at 410.800 kb on - strand, within AZOBR_RS23975 at 410.800 kb on - strand, within AZOBR_RS23975 at 411.925 kb on - strand at 411.925 kb on - strand at 412.236 kb on - strand, within AZOBR_RS23980 at 412.454 kb on + strand, within AZOBR_RS23980 at 412.454 kb on + strand, within AZOBR_RS23980 at 412.454 kb on + strand, within AZOBR_RS23980 at 412.454 kb on + strand, within AZOBR_RS23980 at 412.455 kb on - strand, within AZOBR_RS23980 at 412.455 kb on - strand, within AZOBR_RS23980 at 412.455 kb on - strand, within AZOBR_RS23980 at 412.455 kb on - strand, within AZOBR_RS23980 at 412.455 kb on - strand, within AZOBR_RS23980 at 412.632 kb on - strand, within AZOBR_RS23980 at 412.632 kb on - strand, within AZOBR_RS23980 at 412.632 kb on - strand, within AZOBR_RS23980 at 412.728 kb on - strand, within AZOBR_RS23980 at 412.728 kb on - strand, within AZOBR_RS23980 at 412.739 kb on + strand, within AZOBR_RS23980 at 412.739 kb on + strand, within AZOBR_RS23980 at 412.740 kb on - strand, within AZOBR_RS23980 at 412.740 kb on - strand, within AZOBR_RS23980 at 412.740 kb on - strand, within AZOBR_RS23980 at 412.740 kb on - strand, within AZOBR_RS23980 at 412.740 kb on - strand, within AZOBR_RS23980 at 413.009 kb on + strand at 413.012 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 408,390 + AZOBR_RS23965 0.86 -0.1 408,391 - AZOBR_RS23965 0.86 -0.1 408,391 - AZOBR_RS23965 0.86 +0.1 408,427 - AZOBR_RS23965 0.88 +0.6 408,427 - AZOBR_RS23965 0.88 -0.3 408,600 + +0.2 408,601 - +0.7 408,601 - -0.4 408,883 + AZOBR_RS23970 0.32 -0.2 408,884 - AZOBR_RS23970 0.32 -1.1 408,955 + AZOBR_RS23970 0.43 +1.6 409,297 + -0.2 409,512 + -0.0 409,650 + +0.2 409,650 + +0.4 409,651 - -0.3 409,651 - +0.2 409,770 + AZOBR_RS23975 0.14 -0.9 409,770 + AZOBR_RS23975 0.14 +0.2 409,771 - AZOBR_RS23975 0.14 +0.2 409,812 + AZOBR_RS23975 0.15 -0.3 409,813 - AZOBR_RS23975 0.15 +2.1 409,986 + AZOBR_RS23975 0.22 +0.0 409,986 + AZOBR_RS23975 0.22 -0.3 409,987 - AZOBR_RS23975 0.22 -0.0 410,022 + AZOBR_RS23975 0.23 +0.4 410,022 + AZOBR_RS23975 0.23 +1.2 410,022 + AZOBR_RS23975 0.23 -0.5 410,022 + AZOBR_RS23975 0.23 +0.1 410,022 + AZOBR_RS23975 0.23 +0.2 410,023 - AZOBR_RS23975 0.23 +0.2 410,023 - AZOBR_RS23975 0.23 +0.1 410,023 - AZOBR_RS23975 0.23 -0.3 410,023 - AZOBR_RS23975 0.23 +0.4 410,388 + AZOBR_RS23975 0.36 +0.2 410,799 + AZOBR_RS23975 0.51 +1.1 410,800 - AZOBR_RS23975 0.51 +0.0 410,800 - AZOBR_RS23975 0.51 +0.2 411,925 - +0.7 411,925 - +0.0 412,236 - AZOBR_RS23980 0.13 +0.2 412,454 + AZOBR_RS23980 0.45 -0.1 412,454 + AZOBR_RS23980 0.45 +0.7 412,454 + AZOBR_RS23980 0.45 +0.3 412,454 + AZOBR_RS23980 0.45 +0.0 412,455 - AZOBR_RS23980 0.45 -0.2 412,455 - AZOBR_RS23980 0.45 +1.5 412,455 - AZOBR_RS23980 0.45 +0.8 412,455 - AZOBR_RS23980 0.45 -0.0 412,455 - AZOBR_RS23980 0.45 -0.2 412,632 - AZOBR_RS23980 0.70 -0.0 412,632 - AZOBR_RS23980 0.70 +0.5 412,632 - AZOBR_RS23980 0.70 -0.3 412,728 - AZOBR_RS23980 0.84 +0.9 412,728 - AZOBR_RS23980 0.84 +0.6 412,739 + AZOBR_RS23980 0.85 +0.5 412,739 + AZOBR_RS23980 0.85 -0.0 412,740 - AZOBR_RS23980 0.86 +0.3 412,740 - AZOBR_RS23980 0.86 +0.3 412,740 - AZOBR_RS23980 0.86 -0.6 412,740 - AZOBR_RS23980 0.86 -0.1 412,740 - AZOBR_RS23980 0.86 +1.4 413,009 + +0.5 413,012 - -0.8
Or see this region's nucleotide sequence