Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS23800 and AZOBR_RS23805 are separated by 10 nucleotides AZOBR_RS23805 and AZOBR_RS23810 are separated by 111 nucleotides
AZOBR_RS23800: AZOBR_RS23800 - 2-keto-4-methylthiobutyrate aminotransferase, at 370,928 to 371,740
_RS23800
AZOBR_RS23805: AZOBR_RS23805 - hypothetical protein, at 371,751 to 372,212
_RS23805
AZOBR_RS23810: AZOBR_RS23810 - protease, at 372,324 to 373,409
_RS23810
Position (kb) 371
372
373 Strain fitness (log2 ratio) -2
-1
0
1 at 371.372 kb on + strand, within AZOBR_RS23800 at 371.372 kb on + strand, within AZOBR_RS23800 at 371.373 kb on - strand, within AZOBR_RS23800 at 371.764 kb on + strand at 371.765 kb on - strand at 371.765 kb on - strand at 371.896 kb on + strand, within AZOBR_RS23805 at 371.897 kb on - strand, within AZOBR_RS23805 at 371.897 kb on - strand, within AZOBR_RS23805 at 372.256 kb on + strand at 372.257 kb on - strand at 372.729 kb on - strand, within AZOBR_RS23810 at 372.775 kb on + strand, within AZOBR_RS23810 at 372.775 kb on + strand, within AZOBR_RS23810 at 372.886 kb on + strand, within AZOBR_RS23810 at 372.886 kb on + strand, within AZOBR_RS23810 at 372.886 kb on + strand, within AZOBR_RS23810 at 372.887 kb on - strand, within AZOBR_RS23810 at 372.887 kb on - strand, within AZOBR_RS23810 at 372.887 kb on - strand, within AZOBR_RS23810 at 372.887 kb on - strand, within AZOBR_RS23810
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 371,372 + AZOBR_RS23800 0.55 +0.2 371,372 + AZOBR_RS23800 0.55 +0.4 371,373 - AZOBR_RS23800 0.55 -0.2 371,764 + +0.2 371,765 - -2.3 371,765 - -0.1 371,896 + AZOBR_RS23805 0.31 +0.3 371,897 - AZOBR_RS23805 0.32 +1.1 371,897 - AZOBR_RS23805 0.32 +1.1 372,256 + +0.3 372,257 - +1.3 372,729 - AZOBR_RS23810 0.37 -0.3 372,775 + AZOBR_RS23810 0.42 +0.4 372,775 + AZOBR_RS23810 0.42 +0.6 372,886 + AZOBR_RS23810 0.52 -0.1 372,886 + AZOBR_RS23810 0.52 -0.4 372,886 + AZOBR_RS23810 0.52 +0.5 372,887 - AZOBR_RS23810 0.52 +0.5 372,887 - AZOBR_RS23810 0.52 +0.5 372,887 - AZOBR_RS23810 0.52 -0.6 372,887 - AZOBR_RS23810 0.52 -1.0
Or see this region's nucleotide sequence