Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS21690 and AZOBR_RS21695 are separated by 665 nucleotides AZOBR_RS21695 and AZOBR_RS21700 are separated by 190 nucleotides AZOBR_RS21700 and AZOBR_RS21705 overlap by 4 nucleotides
AZOBR_RS21690: AZOBR_RS21690 - regulator, at 1,643,744 to 1,644,538
_RS21690
AZOBR_RS21695: AZOBR_RS21695 - hypothetical protein, at 1,645,204 to 1,645,683
_RS21695
AZOBR_RS21700: AZOBR_RS21700 - hypothetical protein, at 1,645,874 to 1,646,392
_RS21700
AZOBR_RS21705: AZOBR_RS21705 - 2-aminobenzoate-CoA ligase, at 1,646,389 to 1,648,026
_RS21705
Position (kb)
1645
1646 Strain fitness (log2 ratio)
-1
0
1 at 1644.256 kb on - strand, within AZOBR_RS21690 at 1644.256 kb on - strand, within AZOBR_RS21690 at 1644.256 kb on - strand, within AZOBR_RS21690 at 1644.366 kb on + strand, within AZOBR_RS21690 at 1644.420 kb on + strand, within AZOBR_RS21690 at 1644.498 kb on + strand at 1644.498 kb on + strand at 1644.498 kb on + strand at 1644.552 kb on + strand at 1644.647 kb on + strand at 1644.648 kb on - strand at 1644.655 kb on + strand at 1644.656 kb on - strand at 1644.707 kb on + strand at 1644.721 kb on + strand at 1644.721 kb on + strand at 1644.722 kb on - strand at 1644.722 kb on - strand at 1644.722 kb on - strand at 1644.750 kb on + strand at 1644.751 kb on - strand at 1644.751 kb on - strand at 1644.999 kb on - strand at 1644.999 kb on - strand at 1645.666 kb on + strand at 1645.788 kb on + strand at 1645.789 kb on - strand at 1645.789 kb on - strand at 1645.794 kb on - strand at 1645.794 kb on - strand at 1645.794 kb on - strand at 1645.794 kb on - strand at 1646.157 kb on + strand, within AZOBR_RS21700 at 1646.158 kb on - strand, within AZOBR_RS21700 at 1646.158 kb on - strand, within AZOBR_RS21700 at 1646.158 kb on - strand, within AZOBR_RS21700 at 1646.158 kb on - strand, within AZOBR_RS21700 at 1646.158 kb on - strand, within AZOBR_RS21700 at 1646.158 kb on - strand, within AZOBR_RS21700 at 1646.587 kb on + strand, within AZOBR_RS21705
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 1,644,256 - AZOBR_RS21690 0.64 +0.3 1,644,256 - AZOBR_RS21690 0.64 +0.5 1,644,256 - AZOBR_RS21690 0.64 +0.3 1,644,366 + AZOBR_RS21690 0.78 +0.8 1,644,420 + AZOBR_RS21690 0.85 -0.5 1,644,498 + +0.4 1,644,498 + -0.1 1,644,498 + +0.1 1,644,552 + +0.2 1,644,647 + +0.2 1,644,648 - +0.1 1,644,655 + -0.2 1,644,656 - +1.1 1,644,707 + +0.1 1,644,721 + +0.8 1,644,721 + +0.1 1,644,722 - +0.0 1,644,722 - -1.2 1,644,722 - -0.4 1,644,750 + +0.1 1,644,751 - -0.5 1,644,751 - -0.4 1,644,999 - +0.4 1,644,999 - -0.2 1,645,666 + -0.1 1,645,788 + +0.2 1,645,789 - -0.2 1,645,789 - -0.3 1,645,794 - +0.7 1,645,794 - -0.0 1,645,794 - +0.1 1,645,794 - -0.5 1,646,157 + AZOBR_RS21700 0.55 +0.0 1,646,158 - AZOBR_RS21700 0.55 -0.5 1,646,158 - AZOBR_RS21700 0.55 -0.2 1,646,158 - AZOBR_RS21700 0.55 -0.6 1,646,158 - AZOBR_RS21700 0.55 +0.3 1,646,158 - AZOBR_RS21700 0.55 -0.3 1,646,158 - AZOBR_RS21700 0.55 -0.1 1,646,587 + AZOBR_RS21705 0.12 -0.4
Or see this region's nucleotide sequence