Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS21370 and AZOBR_RS21375 are separated by 117 nucleotides AZOBR_RS21375 and AZOBR_RS21380 are separated by 102 nucleotides AZOBR_RS21380 and AZOBR_RS21385 are separated by 455 nucleotides
AZOBR_RS21370: AZOBR_RS21370 - conserved membrane protein of unknown function, at 1,576,209 to 1,577,108
_RS21370
AZOBR_RS21375: AZOBR_RS21375 - acyl carrier protein, at 1,577,226 to 1,577,564
_RS21375
AZOBR_RS21380: AZOBR_RS21380 - hypothetical protein, at 1,577,667 to 1,578,095
_RS21380
AZOBR_RS21385: AZOBR_RS21385 - 16S ribosomal RNA, at 1,578,551 to 1,580,045
_RS21385
Position (kb)
1577
1578
1579 Strain fitness (log2 ratio)
-1
0
1 at 1576.856 kb on - strand, within AZOBR_RS21370 at 1577.032 kb on - strand at 1577.095 kb on + strand at 1577.095 kb on + strand at 1577.120 kb on + strand at 1577.120 kb on + strand at 1577.120 kb on + strand at 1577.120 kb on + strand at 1577.121 kb on - strand at 1577.121 kb on - strand at 1577.121 kb on - strand at 1577.209 kb on + strand at 1577.226 kb on - strand at 1577.832 kb on + strand, within AZOBR_RS21380 at 1577.832 kb on + strand, within AZOBR_RS21380 at 1577.833 kb on - strand, within AZOBR_RS21380 at 1577.833 kb on - strand, within AZOBR_RS21380 at 1577.833 kb on - strand, within AZOBR_RS21380 at 1577.988 kb on + strand, within AZOBR_RS21380 at 1577.989 kb on - strand, within AZOBR_RS21380 at 1578.094 kb on - strand at 1578.201 kb on + strand at 1578.201 kb on + strand at 1578.202 kb on - strand at 1578.202 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 1,576,856 - AZOBR_RS21370 0.72 -0.3 1,577,032 - -0.0 1,577,095 + +0.2 1,577,095 + -0.2 1,577,120 + -0.6 1,577,120 + -0.1 1,577,120 + +0.2 1,577,120 + +0.6 1,577,121 - +0.0 1,577,121 - +0.4 1,577,121 - +0.3 1,577,209 + +0.1 1,577,226 - -0.4 1,577,832 + AZOBR_RS21380 0.38 +1.3 1,577,832 + AZOBR_RS21380 0.38 -0.3 1,577,833 - AZOBR_RS21380 0.39 -0.5 1,577,833 - AZOBR_RS21380 0.39 -0.1 1,577,833 - AZOBR_RS21380 0.39 +0.6 1,577,988 + AZOBR_RS21380 0.75 +0.2 1,577,989 - AZOBR_RS21380 0.75 +0.3 1,578,094 - -0.4 1,578,201 + +0.5 1,578,201 + -0.3 1,578,202 - -0.2 1,578,202 - +0.5
Or see this region's nucleotide sequence