Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS15715

Experiment: LB

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAZOBR_RS15715 and AZOBR_RS15720 are separated by 235 nucleotides AZOBR_RS15715: AZOBR_RS15715 - gluconokinase, at 278,384 to 278,869 _RS15715 AZOBR_RS15720: AZOBR_RS15720 - LacI family transcription regulator, at 279,105 to 280,112 _RS15720 Position (kb) 278 279Strain fitness (log2 ratio) -1 0 1 2at 277.673 kb on + strandat 277.700 kb on + strandat 277.700 kb on + strandat 277.755 kb on - strandat 278.935 kb on + strandat 278.936 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction LB
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277,673 + -1.3
277,700 + +0.2
277,700 + -0.2
277,755 - -0.1
278,935 + +0.3
278,936 - +1.8

Or see this region's nucleotide sequence