Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS10645
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
2,233,714 | - | -0.5 | |||
2,233,725 | + | -0.2 | |||
2,233,725 | + | +0.3 | |||
2,233,725 | + | -0.3 | |||
2,233,725 | + | +1.0 | |||
2,233,726 | - | +0.9 | |||
2,233,726 | - | +1.8 | |||
2,233,726 | - | +0.5 | |||
2,233,726 | - | -1.4 | |||
2,233,905 | + | AZOBR_RS10635 | 0.30 | +0.3 | |
2,234,064 | + | AZOBR_RS10635 | 0.51 | -0.8 | |
2,234,064 | + | AZOBR_RS10635 | 0.51 | -0.1 | |
2,234,064 | + | AZOBR_RS10635 | 0.51 | -1.9 | |
2,234,065 | - | AZOBR_RS10635 | 0.51 | -0.7 | |
2,234,065 | - | AZOBR_RS10635 | 0.51 | +0.5 | |
2,234,065 | - | AZOBR_RS10635 | 0.51 | +0.3 | |
2,234,119 | - | AZOBR_RS10635 | 0.58 | +0.8 | |
2,234,119 | - | AZOBR_RS10635 | 0.58 | +0.1 | |
2,234,328 | + | AZOBR_RS10635 | 0.86 | +0.4 | |
2,234,329 | - | AZOBR_RS10635 | 0.86 | +0.1 | |
2,234,329 | - | AZOBR_RS10635 | 0.86 | -0.6 | |
2,234,329 | - | AZOBR_RS10635 | 0.86 | +1.1 | |
2,234,349 | + | AZOBR_RS10635 | 0.89 | -0.4 | |
2,234,349 | + | AZOBR_RS10635 | 0.89 | -2.8 | |
2,234,582 | + | AZOBR_RS10640 | 0.71 | -2.6 | |
2,234,582 | + | AZOBR_RS10640 | 0.71 | -1.3 | |
2,234,892 | + | -0.4 | |||
2,235,374 | - | -0.4 | |||
2,235,374 | - | -0.1 | |||
2,235,586 | + | +0.3 | |||
2,235,599 | - | -0.0 |
Or see this region's nucleotide sequence