Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS02195 and AZOBR_RS02200 overlap by 13 nucleotides AZOBR_RS02200 and AZOBR_RS02205 are separated by 144 nucleotides
AZOBR_RS02195: AZOBR_RS02195 - coproporphyrinogen III oxidase, at 450,526 to 451,692
_RS02195
AZOBR_RS02200: AZOBR_RS02200 - nucleoside-triphosphate diphosphatase, at 451,680 to 452,282
_RS02200
AZOBR_RS02205: AZOBR_RS02205 - ribonuclease PH, at 452,427 to 453,146
_RS02205
Position (kb) 451
452
453 Strain fitness (log2 ratio) -2
-1
0
1 at 450.900 kb on - strand, within AZOBR_RS02195 at 450.918 kb on - strand, within AZOBR_RS02195 at 450.918 kb on - strand, within AZOBR_RS02195 at 450.971 kb on + strand, within AZOBR_RS02195 at 451.017 kb on - strand, within AZOBR_RS02195 at 451.193 kb on + strand, within AZOBR_RS02195 at 451.194 kb on - strand, within AZOBR_RS02195 at 451.620 kb on - strand at 451.655 kb on + strand at 451.655 kb on + strand at 451.655 kb on + strand at 451.655 kb on + strand at 451.656 kb on - strand at 451.805 kb on - strand, within AZOBR_RS02200 at 452.008 kb on + strand, within AZOBR_RS02200 at 452.008 kb on + strand at 452.008 kb on + strand, within AZOBR_RS02200 at 452.008 kb on + strand, within AZOBR_RS02200 at 452.008 kb on + strand, within AZOBR_RS02200 at 452.009 kb on - strand, within AZOBR_RS02200 at 452.009 kb on - strand, within AZOBR_RS02200 at 452.428 kb on + strand at 452.428 kb on + strand at 452.428 kb on + strand at 452.429 kb on - strand at 452.429 kb on - strand at 452.647 kb on + strand, within AZOBR_RS02205 at 452.647 kb on + strand, within AZOBR_RS02205 at 452.647 kb on + strand, within AZOBR_RS02205 at 452.647 kb on + strand, within AZOBR_RS02205 at 452.647 kb on + strand, within AZOBR_RS02205 at 452.647 kb on + strand, within AZOBR_RS02205 at 453.186 kb on + strand at 453.186 kb on + strand at 453.187 kb on - strand at 453.187 kb on - strand at 453.255 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 450,900 - AZOBR_RS02195 0.32 -0.2 450,918 - AZOBR_RS02195 0.34 -1.8 450,918 - AZOBR_RS02195 0.34 +0.3 450,971 + AZOBR_RS02195 0.38 -0.4 451,017 - AZOBR_RS02195 0.42 +0.3 451,193 + AZOBR_RS02195 0.57 -0.6 451,194 - AZOBR_RS02195 0.57 -0.3 451,620 - -0.1 451,655 + -0.0 451,655 + +0.1 451,655 + +0.2 451,655 + -0.7 451,656 - +0.1 451,805 - AZOBR_RS02200 0.21 -0.3 452,008 + AZOBR_RS02200 0.54 -1.1 452,008 + +0.3 452,008 + AZOBR_RS02200 0.54 -2.1 452,008 + AZOBR_RS02200 0.54 -1.5 452,008 + AZOBR_RS02200 0.54 -0.9 452,009 - AZOBR_RS02200 0.55 -2.0 452,009 - AZOBR_RS02200 0.55 -1.0 452,428 + -0.5 452,428 + -0.7 452,428 + -0.2 452,429 - +0.2 452,429 - +0.0 452,647 + AZOBR_RS02205 0.31 -0.8 452,647 + AZOBR_RS02205 0.31 -1.0 452,647 + AZOBR_RS02205 0.31 +0.7 452,647 + AZOBR_RS02205 0.31 -0.4 452,647 + AZOBR_RS02205 0.31 -1.7 452,647 + AZOBR_RS02205 0.31 -1.1 453,186 + -0.1 453,186 + +1.2 453,187 - -1.0 453,187 - -0.2 453,255 - -0.2
Or see this region's nucleotide sequence