Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_12440

Experiment: Fumarate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_12430 and AO353_12435 are separated by 287 nucleotidesAO353_12435 and AO353_12440 are separated by 1 nucleotidesAO353_12440 and AO353_12445 are separated by 268 nucleotides AO353_12430: AO353_12430 - ATP-dependent protease subunit HslV, at 2,733,187 to 2,733,717 _12430 AO353_12435: AO353_12435 - cell division protein, at 2,734,005 to 2,734,706 _12435 AO353_12440: AO353_12440 - arginine--tRNA ligase, at 2,734,708 to 2,736,444 _12440 AO353_12445: AO353_12445 - primosomal protein N', at 2,736,713 to 2,738,932 _12445 Position (kb) 2734 2735 2736 2737Strain fitness (log2 ratio) -2 -1 0 1 2at 2733.820 kb on + strandat 2733.820 kb on + strandat 2733.820 kb on + strandat 2733.820 kb on + strandat 2733.820 kb on + strandat 2733.820 kb on + strandat 2733.820 kb on + strandat 2733.821 kb on - strandat 2733.821 kb on - strandat 2733.821 kb on - strandat 2733.821 kb on - strandat 2733.821 kb on - strandat 2733.876 kb on - strandat 2733.919 kb on + strandat 2733.920 kb on - strandat 2733.920 kb on - strandat 2734.027 kb on - strandat 2734.027 kb on - strandat 2734.027 kb on - strandat 2734.027 kb on - strandat 2734.710 kb on - strandat 2736.539 kb on + strandat 2736.539 kb on + strandat 2736.539 kb on + strandat 2736.539 kb on + strandat 2736.539 kb on + strandat 2736.539 kb on + strandat 2736.539 kb on + strandat 2736.539 kb on + strandat 2736.539 kb on + strandat 2736.539 kb on + strandat 2736.539 kb on + strandat 2736.539 kb on + strandat 2736.540 kb on - strandat 2736.540 kb on - strandat 2736.540 kb on - strandat 2736.540 kb on - strandat 2736.540 kb on - strandat 2736.540 kb on - strandat 2736.540 kb on - strandat 2736.540 kb on - strandat 2736.540 kb on - strandat 2736.540 kb on - strandat 2736.540 kb on - strandat 2736.540 kb on - strandat 2736.540 kb on - strandat 2736.540 kb on - strandat 2736.540 kb on - strandat 2736.540 kb on - strandat 2736.540 kb on - strandat 2736.540 kb on - strandat 2736.556 kb on + strandat 2736.556 kb on + strandat 2736.557 kb on - strandat 2736.557 kb on - strandat 2736.557 kb on - strandat 2736.570 kb on - strandat 2736.570 kb on - strandat 2736.570 kb on - strandat 2736.705 kb on + strandat 2736.705 kb on + strandat 2736.705 kb on + strandat 2736.705 kb on + strandat 2736.705 kb on + strandat 2736.705 kb on + strandat 2736.705 kb on + strandat 2736.705 kb on + strandat 2736.705 kb on + strandat 2736.705 kb on + strandat 2736.705 kb on + strandat 2736.705 kb on + strandat 2736.705 kb on + strandat 2736.706 kb on - strandat 2736.706 kb on - strandat 2736.706 kb on - strandat 2736.706 kb on - strandat 2736.706 kb on - strandat 2736.706 kb on - strandat 2736.706 kb on - strandat 2736.706 kb on - strandat 2736.717 kb on + strandat 2736.717 kb on + strandat 2736.718 kb on - strandat 2736.718 kb on - strandat 2736.718 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Fumarate (C)
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2,733,820 + +0.6
2,733,820 + -0.5
2,733,820 + +0.3
2,733,820 + +1.2
2,733,820 + +0.8
2,733,820 + -2.0
2,733,820 + +0.2
2,733,821 - +0.5
2,733,821 - +0.6
2,733,821 - +0.2
2,733,821 - +0.1
2,733,821 - +0.3
2,733,876 - +0.7
2,733,919 + -0.9
2,733,920 - -0.9
2,733,920 - -1.0
2,734,027 - -0.5
2,734,027 - +0.9
2,734,027 - +0.5
2,734,027 - -0.2
2,734,710 - -0.8
2,736,539 + -1.4
2,736,539 + +0.2
2,736,539 + -0.1
2,736,539 + -0.4
2,736,539 + +0.4
2,736,539 + +1.0
2,736,539 + +0.7
2,736,539 + -0.2
2,736,539 + -0.5
2,736,539 + +0.8
2,736,539 + +0.6
2,736,539 + +0.1
2,736,540 - -0.8
2,736,540 - +1.9
2,736,540 - +0.2
2,736,540 - -1.1
2,736,540 - +1.5
2,736,540 - -0.7
2,736,540 - +0.1
2,736,540 - +0.2
2,736,540 - +0.9
2,736,540 - -1.8
2,736,540 - +1.2
2,736,540 - +0.2
2,736,540 - -0.1
2,736,540 - +0.2
2,736,540 - +0.5
2,736,540 - -0.5
2,736,540 - -0.3
2,736,540 - -0.4
2,736,556 + +1.2
2,736,556 + -0.6
2,736,557 - +0.4
2,736,557 - -1.9
2,736,557 - +1.4
2,736,570 - +0.1
2,736,570 - -0.0
2,736,570 - +0.6
2,736,705 + -0.5
2,736,705 + +0.0
2,736,705 + +1.4
2,736,705 + +0.2
2,736,705 + -1.0
2,736,705 + +0.2
2,736,705 + -0.1
2,736,705 + +0.2
2,736,705 + +0.6
2,736,705 + +0.6
2,736,705 + -0.4
2,736,705 + +0.3
2,736,705 + -0.4
2,736,706 - -0.1
2,736,706 - +0.0
2,736,706 - -0.1
2,736,706 - -0.3
2,736,706 - -1.1
2,736,706 - +0.8
2,736,706 - -0.5
2,736,706 - -0.1
2,736,717 + +0.4
2,736,717 + -0.2
2,736,718 - +1.4
2,736,718 - -0.1
2,736,718 - +0.1

Or see this region's nucleotide sequence