Strain Fitness in Rahnella sp. WP5 around EX31_RS14210

Experiment: L-Glutamine (N); RCH2 media; shaking

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Glutamine (N); RCH2 media; shaking
19,960	+		EX31_RS14205	0.29	-3.2
20,034	+		EX31_RS14205	0.37	-3.7
20,093	-		EX31_RS14205	0.44	-3.8
20,105	-		EX31_RS14205	0.45	-2.9
20,105	-		EX31_RS14205	0.45	-3.2
20,167	+		EX31_RS14205	0.52	-5.0
20,167	+		EX31_RS14205	0.52	-1.7
20,168	-		EX31_RS14205	0.52	-3.4
20,168	-		EX31_RS14205	0.52	-2.7
20,214	+		EX31_RS14205	0.57	-2.6
20,214	+		EX31_RS14205	0.57	-2.5
20,214	+		EX31_RS14205	0.57	-1.2
20,214	+		EX31_RS14205	0.57	-2.3
20,214	+		EX31_RS14205	0.57	-0.6
20,215	-		EX31_RS14205	0.57	-2.9
20,215	-		EX31_RS14205	0.57	-2.2
20,290	-		EX31_RS14205	0.65	-3.3
20,332	+		EX31_RS14205	0.70	-3.9
20,333	-		EX31_RS14205	0.70	-4.5
20,333	-		EX31_RS14205	0.70	-2.4
20,374	+		EX31_RS14205	0.74	-3.7
20,399	-		EX31_RS14205	0.77	-2.6
20,446	+		EX31_RS14205	0.82	-1.1
20,447	-		EX31_RS14205	0.83	-3.3
20,473	+		EX31_RS14205	0.85	-2.5
20,473	+		EX31_RS14205	0.85	-3.6
20,474	-		EX31_RS14205	0.85	-2.8
20,474	-		EX31_RS14205	0.85	-2.8
20,474	-		EX31_RS14205	0.85	-2.2
20,474	-		EX31_RS14205	0.85	-2.4
20,474	-		EX31_RS14205	0.85	-2.4
20,474	-		EX31_RS14205	0.85	-3.5
20,488	+		EX31_RS14205	0.87	-2.5
20,488	+		EX31_RS14205	0.87	-2.2
20,488	+		EX31_RS14205	0.87	-3.3
20,488	+		EX31_RS14205	0.87	-0.3
20,488	+		EX31_RS14205	0.87	-1.7
20,488	+		EX31_RS14205	0.87	-2.8
20,488	+		EX31_RS14205	0.87	-0.6
20,488	+		EX31_RS14205	0.87	-2.5
20,489	-		EX31_RS14205	0.87	-3.6
20,489	-		EX31_RS14205	0.87	-2.7
20,489	-		EX31_RS14205	0.87	-2.7
20,489	-		EX31_RS14205	0.87	-3.7
20,489	-		EX31_RS14205	0.87	-3.1
20,489	-		EX31_RS14205	0.87	-3.3
20,489	-		EX31_RS14205	0.87	-2.2
20,506	+		EX31_RS14205	0.89	-1.3
20,507	-		EX31_RS14205	0.89	-2.0
20,549	+				-3.9
20,549	+				-2.6
20,549	+				-2.6
20,550	-				-2.0
20,605	+				-2.2
20,605	+				-4.5
20,606	-				-3.5
20,612	+				-4.7
20,612	+				-3.2
20,639	-				+0.8
20,639	-				+1.7
20,639	-				-0.1
20,676	-				+1.0
20,678	-				-0.1
20,716	+				-1.0
20,717	-				-0.1
20,717	-				+0.1
20,738	+				+0.1
20,738	+				-0.1
20,739	-				-0.5
20,739	-				+0.1
20,739	-				+0.9
20,817	-				-0.6
20,854	+				+0.1
20,854	+				+0.1
20,855	-				+0.3
20,876	+				+0.4
20,876	+				-0.2
20,876	+				+0.4
20,953	+				-0.3
21,073	+				+0.8
21,074	-				+0.5
21,074	-				+0.5
21,074	-				-0.7
21,162	+		EX31_RS14210	0.13	+0.5
21,162	+		EX31_RS14210	0.13	+0.4
21,162	+		EX31_RS14210	0.13	+0.2
21,162	+		EX31_RS14210	0.13	+1.5
21,163	-		EX31_RS14210	0.13	+1.2
21,163	-		EX31_RS14210	0.13	+0.4
21,163	-		EX31_RS14210	0.13	-0.5
21,163	-		EX31_RS14210	0.13	-0.6
21,230	-		EX31_RS14210	0.15	+0.1
21,283	-		EX31_RS14210	0.18	+0.1
21,328	-		EX31_RS14210	0.19	+0.2
21,328	-		EX31_RS14210	0.19	+0.9
21,438	+		EX31_RS14210	0.24	+0.1
21,439	-		EX31_RS14210	0.24	+0.5
21,452	+		EX31_RS14210	0.25	+0.6
21,452	+		EX31_RS14210	0.25	+1.1
21,452	+		EX31_RS14210	0.25	-0.9
21,453	-		EX31_RS14210	0.25	-0.4
21,453	-		EX31_RS14210	0.25	-0.5
21,453	-		EX31_RS14210	0.25	-0.1
21,453	-		EX31_RS14210	0.25	-1.8
21,453	-		EX31_RS14210	0.25	-0.5
21,453	-		EX31_RS14210	0.25	+1.1
21,453	-		EX31_RS14210	0.25	-0.6
21,489	-		EX31_RS14210	0.26	+1.7
21,490	+		EX31_RS14210	0.26	-0.1
21,490	+		EX31_RS14210	0.26	+0.4
21,490	+		EX31_RS14210	0.26	-0.1
21,490	+		EX31_RS14210	0.26	-1.0
21,490	+		EX31_RS14210	0.26	+0.1
21,490	+		EX31_RS14210	0.26	+0.7
21,490	+		EX31_RS14210	0.26	+0.8
21,490	+		EX31_RS14210	0.26	-1.0
21,491	-		EX31_RS14210	0.26	+0.0
21,491	-		EX31_RS14210	0.26	+1.1
21,491	-		EX31_RS14210	0.26	+0.5
21,491	-		EX31_RS14210	0.26	+0.0
21,491	-		EX31_RS14210	0.26	-0.1
21,491	-		EX31_RS14210	0.26	-0.4
21,491	-		EX31_RS14210	0.26	+1.3
21,491	-		EX31_RS14210	0.26	+0.8
21,491	-		EX31_RS14210	0.26	-0.3
21,538	+		EX31_RS14210	0.28	-0.4
21,539	-		EX31_RS14210	0.28	-0.0
21,542	+		EX31_RS14210	0.28	+0.1
21,542	+		EX31_RS14210	0.28	-0.2
21,542	+		EX31_RS14210	0.28	+0.3
21,542	+		EX31_RS14210	0.28	+0.9
21,542	+		EX31_RS14210	0.28	+0.2
21,543	-		EX31_RS14210	0.28	-0.1
21,543	-		EX31_RS14210	0.28	+0.2
21,595	+		EX31_RS14210	0.30	+0.4
21,595	+		EX31_RS14210	0.30	+1.0
21,595	+		EX31_RS14210	0.30	+0.2
21,596	-		EX31_RS14210	0.31	+0.5
21,596	-		EX31_RS14210	0.31	+0.2
21,596	-		EX31_RS14210	0.31	-1.2
21,613	+		EX31_RS14210	0.31	+1.4
21,614	-		EX31_RS14210	0.31	-0.5
21,657	+		EX31_RS14210	0.33	+0.1
21,668	-		EX31_RS14210	0.33	+0.1
21,668	-		EX31_RS14210	0.33	+0.6
21,668	-		EX31_RS14210	0.33	+0.6
21,766	+		EX31_RS14210	0.37	+0.9
21,766	+		EX31_RS14210	0.37	+0.6
21,766	+		EX31_RS14210	0.37	+0.3
21,766	+		EX31_RS14210	0.37	+0.0
21,766	+		EX31_RS14210	0.37	+0.6
21,767	-		EX31_RS14210	0.38	+0.4
21,767	-		EX31_RS14210	0.38	+0.3
21,767	-		EX31_RS14210	0.38	+0.1
21,767	-		EX31_RS14210	0.38	-0.5
21,770	+		EX31_RS14210	0.38	+0.3
21,771	-		EX31_RS14210	0.38	+0.5
21,771	-		EX31_RS14210	0.38	-0.0
21,771	-		EX31_RS14210	0.38	+0.0
21,771	-		EX31_RS14210	0.38	-0.3
21,771	-		EX31_RS14210	0.38	+0.1
21,836	+		EX31_RS14210	0.40	+0.1
21,836	+		EX31_RS14210	0.40	+1.0
21,836	+		EX31_RS14210	0.40	+0.7
21,981	+		EX31_RS14210	0.46	+0.3
21,981	+		EX31_RS14210	0.46	-0.0
21,982	-		EX31_RS14210	0.46	+0.4
22,019	+		EX31_RS14210	0.48	-0.5
22,195	+		EX31_RS14210	0.55	+1.2
22,195	+		EX31_RS14210	0.55	+0.3
22,196	-		EX31_RS14210	0.55	+1.0
22,196	-		EX31_RS14210	0.55	+0.2
22,196	-		EX31_RS14210	0.55	+0.7
22,215	-		EX31_RS14210	0.56	-0.3
22,262	+		EX31_RS14210	0.58	+0.4
22,337	+		EX31_RS14210	0.61	-0.7
22,337	+		EX31_RS14210	0.61	+0.2
22,337	+		EX31_RS14210	0.61	+0.7
22,337	+		EX31_RS14210	0.61	-0.1
22,337	+		EX31_RS14210	0.61	+1.0
22,338	-		EX31_RS14210	0.61	+0.9
22,338	-		EX31_RS14210	0.61	+0.1
22,338	-		EX31_RS14210	0.61	-0.6
22,338	-		EX31_RS14210	0.61	-1.2
22,395	-		EX31_RS14210	0.63	-0.1
22,421	-		EX31_RS14210	0.64	+0.7
22,579	+		EX31_RS14210	0.71	-1.0
22,580	-		EX31_RS14210	0.71	+1.4
22,652	-		EX31_RS14210	0.74	+0.2
22,726	+		EX31_RS14210	0.77	-1.1
22,727	-		EX31_RS14210	0.77	-0.4
22,727	-		EX31_RS14210	0.77	+0.2
22,727	-		EX31_RS14210	0.77	+0.4
22,859	+		EX31_RS14210	0.82	-1.0
22,859	+		EX31_RS14210	0.82	-0.0
22,859	+		EX31_RS14210	0.82	+0.1
22,859	+		EX31_RS14210	0.82	-0.3
22,860	-		EX31_RS14210	0.82	-0.3
22,860	-		EX31_RS14210	0.82	+0.6
22,860	-		EX31_RS14210	0.82	-1.7
22,922	-		EX31_RS14210	0.85	+0.6
22,922	-		EX31_RS14210	0.85	-0.7
22,922	-		EX31_RS14210	0.85	+0.4
22,979	+		EX31_RS14210	0.87	+0.5
22,979	+		EX31_RS14210	0.87	+1.2
22,980	-		EX31_RS14210	0.87	+0.6
22,980	-		EX31_RS14210	0.87	+0.1
22,980	-		EX31_RS14210	0.87	-0.5
22,991	+		EX31_RS14210	0.88	-0.6
22,991	+		EX31_RS14210	0.88	-0.1
22,992	-		EX31_RS14210	0.88	+1.1
22,992	-		EX31_RS14210	0.88	-0.3
22,992	-		EX31_RS14210	0.88	+0.5
23,174	-				-1.2
23,174	-				-1.3
23,183	+				+0.0
23,203	+				-0.2
23,204	-				+0.7
23,204	-				-0.3
23,204	-				-0.6
23,228	+				+0.2
23,229	-				-0.0
23,288	+				+1.2
23,288	+				-0.4
23,288	+				+0.8
23,288	+				-1.0
23,288	+				+0.4
23,288	+				+0.6
23,288	+				+0.4
23,288	+				+0.7
23,288	+				-0.9
23,288	+				-1.1
23,288	+				+0.7
23,288	+				+0.9
23,288	+				-0.2
23,289	-				+1.1
23,289	-				+0.7
23,289	-				+0.3
23,289	-				-0.2
23,289	-				-0.4
23,289	-				+0.2
23,289	-				-0.2
23,289	-				+0.4
23,289	-				-0.1
23,289	-				+0.8
23,289	-				+0.8
23,289	-				-1.5
23,289	-				+0.1
23,289	-				+0.5
23,289	-				+0.6
23,289	-				-0.1
23,289	-				+1.1
23,289	-				+0.2
23,289	-				+0.3
23,289	-				-0.0
23,289	-				-0.5
23,289	-				-0.1
23,292	+				-1.1
23,292	+				+0.9
23,292	+				+0.1
23,292	+				+0.9
23,292	+				+0.8
23,293	-				-0.2
23,293	-				-1.2
23,293	-				-2.0
23,293	-				-0.1
23,293	-				+0.3
23,293	-				-0.7
23,293	-				-2.5
23,360	+				-1.6
23,360	+				-1.5
23,360	+				-2.4
23,361	+				-5.0
23,361	-				-2.8
23,368	+				-4.2
23,369	-				-4.7
23,488	+		EX31_RS14215	0.17	-3.9
23,489	-		EX31_RS14215	0.17	-2.7
23,492	+		EX31_RS14215	0.17	-3.0
23,493	-		EX31_RS14215	0.17	-3.0
23,493	-		EX31_RS14215	0.17	-3.3
23,493	-		EX31_RS14215	0.17	-2.7
23,493	-		EX31_RS14215	0.17	-4.9
23,493	-		EX31_RS14215	0.17	-4.5
23,493	-		EX31_RS14215	0.17	-3.8
23,493	-		EX31_RS14215	0.17	-3.1
23,625	+		EX31_RS14215	0.29	-3.9
23,626	-		EX31_RS14215	0.29	-2.2
23,626	-		EX31_RS14215	0.29	-1.1
23,626	-		EX31_RS14215	0.29	-3.3
23,655	-		EX31_RS14215	0.31	-1.4
23,658	+		EX31_RS14215	0.32	-4.0
23,659	-		EX31_RS14215	0.32	-3.0
23,659	-		EX31_RS14215	0.32	-1.8
23,659	-		EX31_RS14215	0.32	-3.4
23,659	-		EX31_RS14215	0.32	-2.7
23,736	+		EX31_RS14215	0.38	-3.4
23,736	+		EX31_RS14215	0.38	+0.1
23,736	+		EX31_RS14215	0.38	-2.0
23,736	+		EX31_RS14215	0.38	-1.5
23,736	+		EX31_RS14215	0.38	-2.8
23,736	+		EX31_RS14215	0.38	-2.8
23,736	+		EX31_RS14215	0.38	-2.7
23,737	-		EX31_RS14215	0.38	-3.1
23,737	-		EX31_RS14215	0.38	-4.3
23,737	-		EX31_RS14215	0.38	-1.0
23,737	-		EX31_RS14215	0.38	-2.6
23,737	-		EX31_RS14215	0.38	-2.5
23,737	-		EX31_RS14215	0.38	-3.7
23,737	-		EX31_RS14215	0.38	-3.5
23,737	-		EX31_RS14215	0.38	-1.4
23,737	-		EX31_RS14215	0.38	-2.2
23,737	-		EX31_RS14215	0.38	-3.5
23,737	-		EX31_RS14215	0.38	-3.0
23,737	-		EX31_RS14215	0.38	-1.0
23,737	-		EX31_RS14215	0.38	-1.4
23,737	-		EX31_RS14215	0.38	-1.7
23,812	+		EX31_RS14215	0.45	-3.2
23,812	+		EX31_RS14215	0.45	-4.1
23,812	+		EX31_RS14215	0.45	-0.3
23,812	+		EX31_RS14215	0.45	-4.0
23,812	+		EX31_RS14215	0.45	-3.3
23,813	-		EX31_RS14215	0.45	-3.6
23,813	-		EX31_RS14215	0.45	-2.7
23,813	-		EX31_RS14215	0.45	-2.0
23,813	-		EX31_RS14215	0.45	-2.9
23,813	-		EX31_RS14215	0.45	-4.6
23,813	-		EX31_RS14215	0.45	-2.1
23,813	-		EX31_RS14215	0.45	-3.0
23,816	+		EX31_RS14215	0.45	-2.2
23,816	+		EX31_RS14215	0.45	-1.9
23,816	+		EX31_RS14215	0.45	-3.3
23,816	+		EX31_RS14215	0.45	-2.9
23,816	+		EX31_RS14215	0.45	-3.0
23,816	+		EX31_RS14215	0.45	-3.7
23,816	+		EX31_RS14215	0.45	-2.6
23,817	-		EX31_RS14215	0.45	-2.0
23,817	-		EX31_RS14215	0.45	-1.5
23,817	-		EX31_RS14215	0.45	-1.3
23,856	+		EX31_RS14215	0.49	+0.4
23,857	-		EX31_RS14215	0.49	-4.0
23,857	-		EX31_RS14215	0.49	-4.2
23,857	-		EX31_RS14215	0.49	-2.2
23,857	-		EX31_RS14215	0.49	-3.7
23,857	-		EX31_RS14215	0.49	-3.5
23,860	+		EX31_RS14215	0.49	-2.3
23,860	+		EX31_RS14215	0.49	-2.7
23,860	+		EX31_RS14215	0.49	-2.9
23,860	+		EX31_RS14215	0.49	-3.3
23,861	-		EX31_RS14215	0.49	-3.3
23,861	-		EX31_RS14215	0.49	-2.8
23,861	-		EX31_RS14215	0.49	-3.1
23,861	-		EX31_RS14215	0.49	-1.8
23,861	-		EX31_RS14215	0.49	-2.7
23,861	-		EX31_RS14215	0.49	-4.5
23,861	-		EX31_RS14215	0.49	-3.7
23,861	-		EX31_RS14215	0.49	-3.3
23,861	-		EX31_RS14215	0.49	-4.7
23,861	-		EX31_RS14215	0.49	-2.6
23,863	+		EX31_RS14215	0.49	-2.6
23,863	+		EX31_RS14215	0.49	-3.3
23,863	+		EX31_RS14215	0.49	-3.6
23,863	+		EX31_RS14215	0.49	-2.5
23,863	+		EX31_RS14215	0.49	-2.6
23,863	+		EX31_RS14215	0.49	-3.1
23,864	-		EX31_RS14215	0.49	-2.8
23,864	-		EX31_RS14215	0.49	-2.3
23,864	-		EX31_RS14215	0.49	-3.2
23,864	-		EX31_RS14215	0.49	-0.9
23,864	-		EX31_RS14215	0.49	-2.6
23,864	-		EX31_RS14215	0.49	-2.9
23,864	-		EX31_RS14215	0.49	-3.1
23,864	-		EX31_RS14215	0.49	-2.8
23,864	-		EX31_RS14215	0.49	-2.9
23,864	-		EX31_RS14215	0.49	-2.9
23,879	+		EX31_RS14215	0.51	-0.5
23,880	-		EX31_RS14215	0.51	-1.7
23,880	-		EX31_RS14215	0.51	-1.7
24,200	-		EX31_RS14215	0.78	-3.4
24,200	-		EX31_RS14215	0.78	-1.0
24,223	+		EX31_RS14215	0.80	-2.7
24,224	-		EX31_RS14215	0.80	-2.5
24,224	-		EX31_RS14215	0.80	-0.5
24,224	-		EX31_RS14215	0.80	-3.0
24,224	-		EX31_RS14215	0.80	-1.4
24,224	-		EX31_RS14215	0.80	-2.0