Strain Fitness in Rahnella sp. WP5 around EX31_RS13390

Experiment: L-Glutamine (N); RCH2 media; shaking

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Glutamine (N); RCH2 media; shaking
112,927	+		EX31_RS13385	0.65	-1.5
112,927	+		EX31_RS13385	0.65	-0.0
112,928	-		EX31_RS13385	0.65	+0.3
112,990	-		EX31_RS13385	0.69	-0.6
112,990	-		EX31_RS13385	0.69	-0.2
113,002	+		EX31_RS13385	0.70	-0.2
113,002	+		EX31_RS13385	0.70	+0.5
113,002	+		EX31_RS13385	0.70	+1.0
113,002	+		EX31_RS13385	0.70	-0.0
113,003	-		EX31_RS13385	0.70	+0.0
113,003	-		EX31_RS13385	0.70	+0.1
113,003	-		EX31_RS13385	0.70	+0.4
113,023	+		EX31_RS13385	0.72	+1.0
113,024	-		EX31_RS13385	0.72	+1.1
113,086	+		EX31_RS13385	0.76	+1.7
113,086	+		EX31_RS13385	0.76	-0.6
113,086	+		EX31_RS13385	0.76	-0.0
113,086	+		EX31_RS13385	0.76	+1.8
113,087	-		EX31_RS13385	0.76	-0.2
113,167	+		EX31_RS13385	0.82	-0.9
113,167	+		EX31_RS13385	0.82	+0.1
113,168	-		EX31_RS13385	0.83	-0.3
113,168	-		EX31_RS13385	0.83	-0.9
113,168	-		EX31_RS13385	0.83	+0.8
113,252	+		EX31_RS13385	0.89	-0.1
113,351	+				+0.5
113,403	-				-0.3
113,425	+				+0.4
113,425	+				+0.3
113,425	+				+1.4
113,425	+				+0.7
113,425	+				+0.3
113,425	+				+1.0
113,425	+				-0.3
113,425	+				-0.7
113,425	+				+1.7
113,425	+				-0.2
113,425	+				+1.7
113,425	+				+0.3
113,426	-				-1.1
113,426	-				-0.8
113,426	-				+1.4
113,426	-				+0.4
113,426	-				+1.1
113,426	-				+0.5
113,582	+				-0.7
113,582	+				+1.1
113,582	+				+0.0
113,583	-				+0.5
113,583	-				-0.6
113,583	-				+0.2
113,583	-				+0.8
113,592	-				+0.8
113,597	-				+1.6
113,613	+				-0.4
113,613	+				-0.7
113,613	+				+1.2
113,613	+				-0.3
113,613	+				-0.6
113,613	+				-0.5
113,613	+				+0.4
113,613	+				+0.7
113,613	+				+0.5
113,613	+				-0.3
113,613	+				+1.0
113,614	-				+0.3
113,614	-				-0.1
113,614	-				+1.4
113,614	-				+0.1
113,614	-				+0.8
113,614	-				-1.4
113,614	-				+1.3
113,614	-				+1.2
113,614	-				-0.0
113,614	-				-0.2
113,614	-				+0.7
113,614	-				+0.3
113,620	-				-0.1
113,620	-				-0.6
113,626	+				+0.7
113,626	+				+0.7
113,713	+				+0.3
113,713	+				+0.1
113,765	+				+0.4
113,765	+				-0.9
113,766	-				-0.2
113,778	+				+1.2
113,779	-				+1.1
113,779	-				-0.7
113,785	+				-0.0
113,785	+				+0.2
113,785	+				-0.5
113,785	+				+0.6
113,786	-				-0.0
113,786	-				+1.4
113,786	-				-0.5
113,787	+				+0.6
113,787	+				+0.6
113,787	+				-1.1
113,788	-				-0.2
113,788	-				-1.0
113,791	+				+0.5
113,791	+				+0.4
113,792	-				-0.9
113,792	-				-1.5
113,796	+				-0.7
113,797	-				+0.3
113,797	-				-2.3
113,797	-				+0.4
113,797	-				+1.6
113,797	-				-0.6
113,799	-				-0.8
113,824	+				-0.1
113,949	+				+0.1
113,958	+		EX31_RS13390	0.10	-0.0
113,958	+		EX31_RS13390	0.10	-0.1
113,958	+		EX31_RS13390	0.10	+0.4
113,958	+		EX31_RS13390	0.10	-0.6
113,959	-		EX31_RS13390	0.10	+1.0
113,966	-		EX31_RS13390	0.11	-0.4
113,976	+		EX31_RS13390	0.12	+0.7
113,976	+		EX31_RS13390	0.12	-0.5
113,976	+		EX31_RS13390	0.12	-1.7
113,976	+		EX31_RS13390	0.12	-0.4
113,976	+		EX31_RS13390	0.12	-0.4
113,976	+		EX31_RS13390	0.12	+0.8
113,976	+		EX31_RS13390	0.12	-0.3
113,976	+		EX31_RS13390	0.12	+0.5
113,976	+		EX31_RS13390	0.12	+0.5
113,976	+		EX31_RS13390	0.12	-0.9
113,976	+		EX31_RS13390	0.12	-0.2
113,976	+		EX31_RS13390	0.12	-0.5
113,977	-		EX31_RS13390	0.12	+0.7
113,977	-		EX31_RS13390	0.12	-0.4
113,977	-		EX31_RS13390	0.12	-0.8
113,977	-		EX31_RS13390	0.12	-0.4
113,977	-		EX31_RS13390	0.12	-1.1
113,977	-		EX31_RS13390	0.12	+0.1
113,978	+		EX31_RS13390	0.13	+0.1
113,978	+		EX31_RS13390	0.13	+0.4
113,979	-		EX31_RS13390	0.13	+2.3
113,979	-		EX31_RS13390	0.13	+0.9
113,979	-		EX31_RS13390	0.13	-1.0
114,048	+		EX31_RS13390	0.21	+0.2
114,048	+		EX31_RS13390	0.21	+0.3
114,098	-		EX31_RS13390	0.27	-0.6
114,113	+		EX31_RS13390	0.29	-1.1
114,113	+		EX31_RS13390	0.29	-0.1
114,113	+		EX31_RS13390	0.29	-0.4
114,114	-		EX31_RS13390	0.29	-0.4
114,182	+		EX31_RS13390	0.37	+1.2
114,183	-		EX31_RS13390	0.37	-0.4
114,203	+		EX31_RS13390	0.40	+0.4
114,204	-		EX31_RS13390	0.40	+0.0
114,204	-		EX31_RS13390	0.40	+1.5
114,204	-		EX31_RS13390	0.40	-2.1
114,247	+		EX31_RS13390	0.45	-0.3
114,247	+		EX31_RS13390	0.45	+0.0
114,247	+		EX31_RS13390	0.45	-0.4
114,247	+		EX31_RS13390	0.45	-0.2
114,248	-		EX31_RS13390	0.45	-0.8
114,250	+		EX31_RS13390	0.45	-1.3
114,276	-		EX31_RS13390	0.48	+1.0
114,276	-		EX31_RS13390	0.48	+1.2
114,400	+		EX31_RS13390	0.63	-0.9
114,400	+		EX31_RS13390	0.63	+0.9
114,400	+		EX31_RS13390	0.63	+1.3
114,401	-		EX31_RS13390	0.63	-0.4
114,401	-		EX31_RS13390	0.63	+1.2
114,401	-		EX31_RS13390	0.63	+0.4
114,414	+		EX31_RS13390	0.65	-1.4
114,414	+		EX31_RS13390	0.65	+0.7
114,414	+		EX31_RS13390	0.65	+0.7
114,415	-		EX31_RS13390	0.65	+1.7
114,415	-		EX31_RS13390	0.65	-0.2
114,415	-		EX31_RS13390	0.65	-1.2
114,415	-		EX31_RS13390	0.65	+1.3
114,415	-		EX31_RS13390	0.65	+0.4
114,468	-		EX31_RS13390	0.71	-2.0
114,480	+		EX31_RS13390	0.73	+0.2
114,480	+		EX31_RS13390	0.73	+0.3
114,522	+		EX31_RS13390	0.78	-0.0
114,522	+		EX31_RS13390	0.78	-0.7
114,523	-		EX31_RS13390	0.78	-1.2
114,578	+		EX31_RS13390	0.85	-0.1
114,590	+		EX31_RS13390	0.86	+0.7
114,591	-		EX31_RS13390	0.86	-0.6
114,591	-		EX31_RS13390	0.86	+0.4
114,591	-		EX31_RS13390	0.86	+0.5
114,591	-		EX31_RS13390	0.86	+0.3
114,644	+				-0.2
114,644	+				+0.4
114,645	-				+0.6
114,738	+				-0.7
114,738	+				+0.7
114,738	+				+0.6
114,856	-		EX31_RS13395	0.28	+0.3
114,856	-		EX31_RS13395	0.28	+1.7
114,857	+		EX31_RS13395	0.29	+0.8
114,858	-		EX31_RS13395	0.29	+0.3
114,893	-		EX31_RS13395	0.35	+0.6
114,932	+		EX31_RS13395	0.42	-0.3
114,963	-		EX31_RS13395	0.48	+0.3
114,975	+		EX31_RS13395	0.50	+0.7
114,976	-		EX31_RS13395	0.50	-1.3
114,976	-		EX31_RS13395	0.50	+0.1
114,976	-		EX31_RS13395	0.50	-0.8
115,021	+		EX31_RS13395	0.59	+0.2
115,022	-		EX31_RS13395	0.59	+1.1
115,208	+				+1.5
115,208	+				+0.2
115,208	+				+0.9
115,209	-				+0.3
115,209	-				-0.2
115,209	-				-0.4
115,256	+				+1.2
115,257	-				+0.2
115,262	+				+0.4
115,328	+				+1.3
115,373	+		EX31_RS13400	0.14	+0.1
115,374	-		EX31_RS13400	0.14	-1.5
115,374	-		EX31_RS13400	0.14	+0.6
115,433	+		EX31_RS13400	0.24	-0.7
115,599	-		EX31_RS13400	0.54	+0.5
115,664	+		EX31_RS13400	0.66	-2.0
115,665	-		EX31_RS13400	0.66	-0.5
115,697	-		EX31_RS13400	0.72	-0.7