Strain Fitness in Rahnella sp. WP5 around EX31_RS04820

Experiment: L-Glutamine (N); RCH2 media; shaking

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Glutamine (N); RCH2 media; shaking
82,268	-		EX31_RS04815	0.62	+0.9
82,268	-		EX31_RS04815	0.62	-0.4
82,280	-		EX31_RS04815	0.62	+0.5
82,280	-		EX31_RS04815	0.62	-0.4
82,292	-		EX31_RS04815	0.63	-0.8
82,335	-		EX31_RS04815	0.65	+0.1
82,335	-		EX31_RS04815	0.65	-0.5
82,335	-		EX31_RS04815	0.65	+0.7
82,360	+		EX31_RS04815	0.66	+0.8
82,360	+		EX31_RS04815	0.66	+1.7
82,360	+		EX31_RS04815	0.66	+1.6
82,360	+		EX31_RS04815	0.66	-0.4
82,360	+		EX31_RS04815	0.66	+0.4
82,361	-		EX31_RS04815	0.66	+0.0
82,361	-		EX31_RS04815	0.66	+0.6
82,372	+		EX31_RS04815	0.66	+0.3
82,373	-		EX31_RS04815	0.66	+0.0
82,378	+		EX31_RS04815	0.66	+0.6
82,388	+		EX31_RS04815	0.67	+0.4
82,415	+		EX31_RS04815	0.68	-0.1
82,415	+		EX31_RS04815	0.68	+0.2
82,415	+		EX31_RS04815	0.68	+0.4
82,416	-		EX31_RS04815	0.68	-0.6
82,416	-		EX31_RS04815	0.68	-0.1
82,471	+		EX31_RS04815	0.70	-0.7
82,471	+		EX31_RS04815	0.70	-0.2
82,471	+		EX31_RS04815	0.70	-0.1
82,471	+		EX31_RS04815	0.70	+0.8
82,471	+		EX31_RS04815	0.70	-0.2
82,471	+		EX31_RS04815	0.70	+1.6
82,471	+		EX31_RS04815	0.70	+0.2
82,471	+		EX31_RS04815	0.70	-0.4
82,471	+		EX31_RS04815	0.70	+0.3
82,471	+		EX31_RS04815	0.70	+0.2
82,471	+		EX31_RS04815	0.70	-0.2
82,471	+		EX31_RS04815	0.70	-1.9
82,471	+		EX31_RS04815	0.70	-0.0
82,471	+		EX31_RS04815	0.70	+0.1
82,471	+		EX31_RS04815	0.70	+0.6
82,471	+		EX31_RS04815	0.70	-0.4
82,471	+		EX31_RS04815	0.70	+0.5
82,471	+		EX31_RS04815	0.70	-0.8
82,471	+		EX31_RS04815	0.70	-0.1
82,471	+		EX31_RS04815	0.70	-1.0
82,471	+		EX31_RS04815	0.70	+0.1
82,471	+		EX31_RS04815	0.70	+0.8
82,471	+		EX31_RS04815	0.70	+0.4
82,471	+		EX31_RS04815	0.70	-0.7
82,472	-		EX31_RS04815	0.70	+0.4
82,472	-		EX31_RS04815	0.70	-1.3
82,472	-		EX31_RS04815	0.70	+0.3
82,472	-		EX31_RS04815	0.70	-0.7
82,472	-		EX31_RS04815	0.70	-0.6
82,472	-		EX31_RS04815	0.70	+0.7
82,472	-		EX31_RS04815	0.70	-1.2
82,472	-		EX31_RS04815	0.70	+0.4
82,472	-		EX31_RS04815	0.70	+0.4
82,472	-		EX31_RS04815	0.70	+0.6
82,472	-		EX31_RS04815	0.70	-0.2
82,472	-		EX31_RS04815	0.70	+0.8
82,472	-		EX31_RS04815	0.70	-0.4
82,472	-		EX31_RS04815	0.70	-1.0
82,472	-		EX31_RS04815	0.70	-1.1
82,472	-		EX31_RS04815	0.70	+0.2
82,472	-		EX31_RS04815	0.70	+0.2
82,472	-		EX31_RS04815	0.70	+0.1
82,472	-		EX31_RS04815	0.70	-0.7
82,472	-		EX31_RS04815	0.70	-0.3
82,472	-		EX31_RS04815	0.70	-0.2
82,472	-		EX31_RS04815	0.70	+0.3
82,472	-		EX31_RS04815	0.70	-0.2
82,472	-		EX31_RS04815	0.70	+0.9
82,472	-		EX31_RS04815	0.70	-0.9
82,521	-		EX31_RS04815	0.72	+0.5
82,555	+		EX31_RS04815	0.73	+0.2
82,556	-		EX31_RS04815	0.73	+0.8
82,556	-		EX31_RS04815	0.73	+0.8
82,556	-		EX31_RS04815	0.73	+0.7
82,573	+		EX31_RS04815	0.74	-0.0
82,573	+		EX31_RS04815	0.74	+0.3
82,573	+		EX31_RS04815	0.74	-1.7
82,574	-		EX31_RS04815	0.74	-0.3
82,574	-		EX31_RS04815	0.74	-1.1
82,574	-		EX31_RS04815	0.74	-0.2
82,574	-		EX31_RS04815	0.74	+0.0
82,574	-		EX31_RS04815	0.74	+0.8
82,575	+		EX31_RS04815	0.74	+2.0
82,585	-		EX31_RS04815	0.74	-0.3
82,585	-		EX31_RS04815	0.74	+0.7
82,610	-		EX31_RS04815	0.75	-0.6
82,610	-		EX31_RS04815	0.75	+0.3
82,651	+		EX31_RS04815	0.77	-1.6
82,652	-		EX31_RS04815	0.77	+0.8
82,657	+		EX31_RS04815	0.77	+0.6
82,657	+		EX31_RS04815	0.77	-0.3
82,657	+		EX31_RS04815	0.77	-0.2
82,658	-		EX31_RS04815	0.77	-0.3
82,658	-		EX31_RS04815	0.77	-1.3
82,658	-		EX31_RS04815	0.77	+0.7
82,658	-		EX31_RS04815	0.77	-0.6
82,658	-		EX31_RS04815	0.77	+0.3
82,760	+		EX31_RS04815	0.81	+0.5
82,761	-		EX31_RS04815	0.81	-0.7
82,761	-		EX31_RS04815	0.81	+0.0
82,763	+		EX31_RS04815	0.81	+0.3
82,763	+		EX31_RS04815	0.81	+0.1
82,763	+		EX31_RS04815	0.81	-1.3
82,763	+		EX31_RS04815	0.81	-1.0
82,763	+		EX31_RS04815	0.81	+0.7
82,763	+		EX31_RS04815	0.81	+0.4
82,763	+		EX31_RS04815	0.81	-0.1
82,763	+		EX31_RS04815	0.81	-0.5
82,763	+		EX31_RS04815	0.81	+0.2
82,763	+		EX31_RS04815	0.81	-1.1
82,763	+		EX31_RS04815	0.81	-0.5
82,763	+		EX31_RS04815	0.81	-0.8
82,763	+		EX31_RS04815	0.81	+1.0
82,763	+		EX31_RS04815	0.81	+0.7
82,763	+		EX31_RS04815	0.81	-0.5
82,763	+		EX31_RS04815	0.81	-1.1
82,763	+		EX31_RS04815	0.81	-0.3
82,764	-		EX31_RS04815	0.81	-1.2
82,764	-		EX31_RS04815	0.81	+0.9
82,764	-		EX31_RS04815	0.81	-0.4
82,764	-		EX31_RS04815	0.81	+2.2
82,764	-		EX31_RS04815	0.81	-0.3
82,764	-		EX31_RS04815	0.81	-0.2
82,764	-		EX31_RS04815	0.81	+0.1
82,764	-		EX31_RS04815	0.81	-0.5
82,764	-		EX31_RS04815	0.81	+0.6
82,764	-		EX31_RS04815	0.81	+0.2
82,764	-		EX31_RS04815	0.81	+0.5
82,767	+		EX31_RS04815	0.82	-0.6
82,767	+		EX31_RS04815	0.82	+0.6
82,767	+		EX31_RS04815	0.82	+0.2
82,767	+		EX31_RS04815	0.82	+0.7
82,768	-		EX31_RS04815	0.82	-1.0
82,768	-		EX31_RS04815	0.82	-0.1
82,768	-		EX31_RS04815	0.82	-0.2
82,768	-		EX31_RS04815	0.82	-0.1
82,768	-		EX31_RS04815	0.82	+0.1
82,847	-		EX31_RS04815	0.85	+0.3
82,858	+		EX31_RS04815	0.85	-0.4
82,858	+		EX31_RS04815	0.85	-0.0
82,858	+		EX31_RS04815	0.85	+0.3
82,858	+		EX31_RS04815	0.85	-1.2
82,859	-		EX31_RS04815	0.85	+1.0
82,859	-		EX31_RS04815	0.85	+1.0
82,859	-		EX31_RS04815	0.85	+1.2
82,859	-		EX31_RS04815	0.85	-0.1
82,859	-		EX31_RS04815	0.85	+0.1
82,861	-		EX31_RS04815	0.85	-0.7
82,907	+		EX31_RS04815	0.87	+0.9
82,907	+		EX31_RS04815	0.87	+0.2
82,907	+		EX31_RS04815	0.87	-0.0
82,907	+		EX31_RS04815	0.87	-0.1
82,907	+		EX31_RS04815	0.87	-0.2
82,907	+		EX31_RS04815	0.87	-0.3
82,907	+		EX31_RS04815	0.87	+0.8
82,907	+		EX31_RS04815	0.87	+0.4
82,907	+		EX31_RS04815	0.87	-0.6
82,908	-		EX31_RS04815	0.87	+1.2
82,908	-		EX31_RS04815	0.87	+0.4
82,908	-		EX31_RS04815	0.87	+0.7
82,908	-		EX31_RS04815	0.87	+0.3
82,908	-		EX31_RS04815	0.87	+1.4
82,908	-		EX31_RS04815	0.87	-0.2
82,908	-		EX31_RS04815	0.87	+0.6
82,908	-		EX31_RS04815	0.87	+0.2
82,908	-		EX31_RS04815	0.87	+0.3
82,908	-		EX31_RS04815	0.87	+0.6
82,911	+		EX31_RS04815	0.87	-0.4
82,920	+		EX31_RS04815	0.88	+0.3
82,920	+		EX31_RS04815	0.88	-0.2
82,921	-		EX31_RS04815	0.88	-0.2
83,059	-				-1.8
83,070	+				-0.6
83,106	+				+1.2
83,129	+				+0.4
83,229	+				+0.3
83,229	+				-1.1
83,229	+				-0.1
83,229	+				+0.3
83,229	+				+1.1
83,230	-				-0.1
83,230	-				+0.5
83,230	-				-0.6
83,230	-				+0.0
83,230	-				-0.3
83,230	-				-0.6
83,230	-				-0.5
83,233	+				-0.4
83,233	+				-0.5
83,253	+				+0.3
83,288	+				-0.3
83,288	+				-0.3
83,288	+				+0.0
83,288	+				+0.4
83,289	-				+0.9
83,289	-				+0.7
83,289	-				+0.0
83,315	+				+0.6
83,315	+				-1.7
83,316	-				-0.2
83,316	-				+1.1
83,316	-				+0.6
83,319	+				-1.1
83,320	-				+2.6
83,320	-				+0.1
83,320	-				-0.5
83,320	-				-0.0
83,387	-		EX31_RS04820	0.13	-0.8
83,476	+		EX31_RS04820	0.21	+0.4
83,528	+		EX31_RS04820	0.25	-0.3
83,528	+		EX31_RS04820	0.25	+0.3
83,528	+		EX31_RS04820	0.25	+0.6
83,529	-		EX31_RS04820	0.25	+0.9
83,529	-		EX31_RS04820	0.25	+2.6
83,531	+		EX31_RS04820	0.26	+0.2
83,531	+		EX31_RS04820	0.26	-0.8
83,539	+		EX31_RS04820	0.26	+0.7
83,539	+		EX31_RS04820	0.26	+0.5
83,539	+		EX31_RS04820	0.26	+0.1
83,539	+		EX31_RS04820	0.26	-0.1
83,539	+		EX31_RS04820	0.26	+0.0
83,539	+		EX31_RS04820	0.26	+1.0
83,540	-		EX31_RS04820	0.26	-1.2
83,540	-		EX31_RS04820	0.26	+0.3
83,540	-		EX31_RS04820	0.26	+0.6
83,540	-		EX31_RS04820	0.26	-0.7
83,540	-		EX31_RS04820	0.26	+0.8
83,540	-		EX31_RS04820	0.26	+0.4
83,540	-		EX31_RS04820	0.26	+0.0
83,540	-		EX31_RS04820	0.26	-0.2
83,540	-		EX31_RS04820	0.26	+0.6
83,540	-		EX31_RS04820	0.26	+1.3
83,540	-		EX31_RS04820	0.26	+0.2
83,540	-		EX31_RS04820	0.26	+0.5
83,546	+		EX31_RS04820	0.27	+1.1
83,546	+		EX31_RS04820	0.27	-0.5
83,547	-		EX31_RS04820	0.27	-0.3
83,558	+		EX31_RS04820	0.28	-1.0
83,558	+		EX31_RS04820	0.28	-0.1
83,558	+		EX31_RS04820	0.28	+0.8
83,558	+		EX31_RS04820	0.28	+0.1
83,559	-		EX31_RS04820	0.28	-0.0
83,559	-		EX31_RS04820	0.28	+0.5
83,559	-		EX31_RS04820	0.28	-0.6
83,559	-		EX31_RS04820	0.28	+1.7
83,562	+		EX31_RS04820	0.28	+0.9
83,563	-		EX31_RS04820	0.28	+1.7
83,584	+		EX31_RS04820	0.30	+1.4
83,584	+		EX31_RS04820	0.30	+0.0
83,585	-		EX31_RS04820	0.30	-0.8
83,593	-		EX31_RS04820	0.31	-0.5
83,700	+		EX31_RS04820	0.41	-0.1
83,700	+		EX31_RS04820	0.41	-0.6
83,700	+		EX31_RS04820	0.41	-1.5
83,700	+		EX31_RS04820	0.41	-0.2
83,700	+		EX31_RS04820	0.41	+0.0
83,701	-		EX31_RS04820	0.41	+0.1
83,701	-		EX31_RS04820	0.41	+1.8
83,701	-		EX31_RS04820	0.41	+0.9
83,701	-		EX31_RS04820	0.41	+0.8
83,701	-		EX31_RS04820	0.41	+0.0
83,701	-		EX31_RS04820	0.41	+0.4
83,701	-		EX31_RS04820	0.41	+0.3
83,765	+		EX31_RS04820	0.47	+0.6
83,773	+		EX31_RS04820	0.47	+1.2
83,774	-		EX31_RS04820	0.47	-0.3
83,791	-		EX31_RS04820	0.49	+0.2
83,805	+		EX31_RS04820	0.50	+0.6
83,805	+		EX31_RS04820	0.50	+0.3
83,807	+		EX31_RS04820	0.50	-2.4
83,807	+		EX31_RS04820	0.50	+1.6
83,807	+		EX31_RS04820	0.50	+0.8
83,807	+		EX31_RS04820	0.50	+0.3
83,808	-		EX31_RS04820	0.50	-0.1
83,808	-		EX31_RS04820	0.50	+0.4
83,808	-		EX31_RS04820	0.50	+0.6
83,808	-		EX31_RS04820	0.50	-1.0
83,808	-		EX31_RS04820	0.50	-1.8
83,833	+		EX31_RS04820	0.53	+0.5
83,833	+		EX31_RS04820	0.53	+0.1
83,833	+		EX31_RS04820	0.53	+0.0
83,833	+		EX31_RS04820	0.53	+0.4
83,833	+		EX31_RS04820	0.53	+0.9
83,834	-		EX31_RS04820	0.53	-0.3
83,834	-		EX31_RS04820	0.53	+0.1
83,897	-		EX31_RS04820	0.58	+0.7
83,897	-		EX31_RS04820	0.58	+0.1
83,897	-		EX31_RS04820	0.58	+0.9
83,897	-		EX31_RS04820	0.58	+0.0
83,986	-		EX31_RS04820	0.66	-0.1
83,986	-		EX31_RS04820	0.66	-0.1
84,021	+		EX31_RS04820	0.70	+0.6
84,021	+		EX31_RS04820	0.70	+1.1
84,022	-		EX31_RS04820	0.70	-0.3
84,022	-		EX31_RS04820	0.70	-0.1
84,029	+		EX31_RS04820	0.70	+0.2
84,030	-		EX31_RS04820	0.70	-0.2
84,042	+		EX31_RS04820	0.71	-1.0
84,042	+		EX31_RS04820	0.71	+1.9
84,042	+		EX31_RS04820	0.71	+0.6
84,042	+		EX31_RS04820	0.71	-0.3
84,042	+		EX31_RS04820	0.71	-0.4
84,042	+		EX31_RS04820	0.71	-1.2
84,042	+		EX31_RS04820	0.71	+0.4
84,042	+		EX31_RS04820	0.71	+1.6
84,042	+		EX31_RS04820	0.71	-0.1
84,042	+		EX31_RS04820	0.71	-1.2
84,042	+		EX31_RS04820	0.71	-0.0
84,042	+		EX31_RS04820	0.71	+0.3
84,042	+		EX31_RS04820	0.71	-0.5
84,042	+		EX31_RS04820	0.71	-0.7
84,043	-		EX31_RS04820	0.72	+0.1
84,043	-		EX31_RS04820	0.72	+0.2
84,043	-		EX31_RS04820	0.72	+0.8
84,043	-		EX31_RS04820	0.72	+0.6
84,043	-		EX31_RS04820	0.72	-0.3
84,043	-		EX31_RS04820	0.72	+0.4
84,043	-		EX31_RS04820	0.72	+1.3
84,043	-		EX31_RS04820	0.72	-0.1
84,046	+		EX31_RS04820	0.72	-0.3
84,046	+		EX31_RS04820	0.72	-0.4
84,046	+		EX31_RS04820	0.72	-0.2
84,046	+		EX31_RS04820	0.72	+0.3
84,047	-		EX31_RS04820	0.72	-0.1
84,047	-		EX31_RS04820	0.72	-0.2
84,047	-		EX31_RS04820	0.72	+0.3
84,133	+		EX31_RS04820	0.80	+0.4
84,133	+		EX31_RS04820	0.80	+0.1
84,134	-		EX31_RS04820	0.80	+0.3
84,169	-		EX31_RS04820	0.83	-0.6
84,169	-		EX31_RS04820	0.83	-0.7
84,207	+		EX31_RS04820	0.86	-0.3
84,255	+				+0.1
84,270	+				-0.3
84,271	-				+0.4
84,271	-				+0.6
84,288	+				+0.3
84,288	+				-1.5
84,289	-				-0.1
84,289	-				+0.2
84,289	-				+1.0
84,347	+				+0.2
84,347	+				+0.2
84,347	+				-0.4
84,347	+				+1.6
84,348	-				-0.7
84,352	-				-0.5
84,461	+				-0.7
84,462	-				+0.8
84,505	+				+0.8
84,505	+				+0.6
84,505	+				-0.3
84,505	+				-0.1
84,505	+				-0.5
84,506	-				+1.3
84,506	-				+0.6
84,506	-				-0.1
84,506	-				+0.4
84,527	-				-0.1
84,536	+				+0.7
84,537	-				+0.1
84,537	-				+0.1
84,560	+				-0.1
84,604	+				-0.7
84,605	-				+0.2
84,605	-				-0.1
84,605	-				+0.6
84,611	+				+0.1
84,611	+				+0.1
84,612	-		EX31_RS04825	0.10	-0.5
84,692	+		EX31_RS04825	0.13	-0.5
84,693	-		EX31_RS04825	0.13	-0.2
84,693	-		EX31_RS04825	0.13	+0.4
84,693	-		EX31_RS04825	0.13	+1.1
84,781	+		EX31_RS04825	0.17	-0.1
84,869	+		EX31_RS04825	0.21	-0.1
84,933	-		EX31_RS04825	0.24	+0.8
85,011	-		EX31_RS04825	0.27	+0.5
85,011	-		EX31_RS04825	0.27	+1.6
85,011	-		EX31_RS04825	0.27	-0.8
85,011	-		EX31_RS04825	0.27	+0.1
85,014	-		EX31_RS04825	0.27	-1.6
85,014	-		EX31_RS04825	0.27	-0.7
85,102	+		EX31_RS04825	0.31	+0.7
85,103	-		EX31_RS04825	0.31	-0.2
85,103	-		EX31_RS04825	0.31	-0.4
85,103	-		EX31_RS04825	0.31	-0.4
85,103	-		EX31_RS04825	0.31	+0.5
85,165	+		EX31_RS04825	0.33	+0.1
85,263	+		EX31_RS04825	0.37	+1.5
85,317	+		EX31_RS04825	0.40	+0.1
85,317	+		EX31_RS04825	0.40	-0.8
85,317	+		EX31_RS04825	0.40	+0.0
85,318	-		EX31_RS04825	0.40	+1.1
85,318	-		EX31_RS04825	0.40	-1.7
85,318	-		EX31_RS04825	0.40	+0.1
85,318	-		EX31_RS04825	0.40	-1.0
85,345	+		EX31_RS04825	0.41	+0.1