Strain Fitness in Rahnella sp. WP5 around EX31_RS03260

Experiment: L-Glutamine (N); RCH2 media; shaking

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Glutamine (N); RCH2 media; shaking
141,846	+				-0.3
141,846	+				+0.7
141,846	+				+1.5
141,846	+				+0.6
141,846	+				+0.1
141,846	+				+0.6
141,846	+				+0.1
141,846	+				-2.2
141,846	+				-0.1
141,846	+				-0.5
141,847	-				+0.2
141,847	-				+0.1
141,847	-				+2.7
141,847	-				-2.2
141,847	-				-0.1
141,847	-				-1.2
141,918	+		EX31_RS03255	0.10	-0.1
141,918	+		EX31_RS03255	0.10	-1.0
141,918	+		EX31_RS03255	0.10	-0.3
141,918	+		EX31_RS03255	0.10	+0.6
141,919	-		EX31_RS03255	0.10	+0.5
141,919	-		EX31_RS03255	0.10	+0.4
141,919	-		EX31_RS03255	0.10	-1.8
141,952	+		EX31_RS03255	0.14	-0.0
142,007	+		EX31_RS03255	0.20	-0.8
142,107	+		EX31_RS03255	0.32	+1.5
142,125	+		EX31_RS03255	0.34	+0.7
142,125	+		EX31_RS03255	0.34	+0.6
142,125	+		EX31_RS03255	0.34	+0.0
142,126	-		EX31_RS03255	0.34	+1.7
142,126	-		EX31_RS03255	0.34	+0.1
142,126	-		EX31_RS03255	0.34	+0.2
142,126	-		EX31_RS03255	0.34	+0.8
142,126	-		EX31_RS03255	0.34	-0.1
142,128	+		EX31_RS03255	0.34	-0.1
142,128	+		EX31_RS03255	0.34	+0.6
142,129	-		EX31_RS03255	0.34	+1.1
142,129	-		EX31_RS03255	0.34	-2.2
142,151	+		EX31_RS03255	0.37	-1.2
142,151	+		EX31_RS03255	0.37	-1.2
142,152	-		EX31_RS03255	0.37	-0.0
142,152	-		EX31_RS03255	0.37	-0.3
142,152	-		EX31_RS03255	0.37	+0.1
142,173	+		EX31_RS03255	0.39	+0.2
142,173	+		EX31_RS03255	0.39	-0.9
142,173	+		EX31_RS03255	0.39	-0.6
142,173	+		EX31_RS03255	0.39	+0.2
142,173	+		EX31_RS03255	0.39	+0.2
142,173	+		EX31_RS03255	0.39	+0.1
142,173	+		EX31_RS03255	0.39	+0.0
142,173	+		EX31_RS03255	0.39	-0.7
142,173	+		EX31_RS03255	0.39	-0.3
142,173	+		EX31_RS03255	0.39	-0.2
142,174	-		EX31_RS03255	0.39	-1.0
142,174	-		EX31_RS03255	0.39	-0.8
142,174	-		EX31_RS03255	0.39	-1.8
142,174	-		EX31_RS03255	0.39	-0.6
142,222	+		EX31_RS03255	0.45	-0.6
142,222	+		EX31_RS03255	0.45	+2.2
142,222	+		EX31_RS03255	0.45	+0.4
142,222	+		EX31_RS03255	0.45	-0.3
142,222	+		EX31_RS03255	0.45	+0.7
142,222	+		EX31_RS03255	0.45	+0.2
142,222	+		EX31_RS03255	0.45	+0.7
142,223	-		EX31_RS03255	0.45	+0.5
142,223	-		EX31_RS03255	0.45	-0.1
142,223	-		EX31_RS03255	0.45	-0.1
142,223	-		EX31_RS03255	0.45	+0.2
142,223	-		EX31_RS03255	0.45	+1.5
142,223	-		EX31_RS03255	0.45	-0.2
142,223	-		EX31_RS03255	0.45	-0.3
142,223	-		EX31_RS03255	0.45	-0.1
142,223	-		EX31_RS03255	0.45	+0.1
142,279	+		EX31_RS03255	0.51	-0.6
142,279	+		EX31_RS03255	0.51	+1.4
142,280	-		EX31_RS03255	0.52	-0.5
142,313	+		EX31_RS03255	0.55	+0.6
142,313	+		EX31_RS03255	0.55	-0.6
142,313	+		EX31_RS03255	0.55	+0.7
142,314	-		EX31_RS03255	0.55	-0.4
142,314	-		EX31_RS03255	0.55	-0.6
142,316	+		EX31_RS03255	0.56	-0.0
142,344	+		EX31_RS03255	0.59	+1.6
142,344	+		EX31_RS03255	0.59	+1.5
142,344	+		EX31_RS03255	0.59	-0.9
142,344	+		EX31_RS03255	0.59	-0.8
142,344	+		EX31_RS03255	0.59	+0.2
142,344	+		EX31_RS03255	0.59	-0.6
142,344	+		EX31_RS03255	0.59	+0.1
142,344	+		EX31_RS03255	0.59	+0.6
142,344	+		EX31_RS03255	0.59	+2.7
142,344	+		EX31_RS03255	0.59	+0.1
142,345	-		EX31_RS03255	0.59	+0.3
142,347	-		EX31_RS03255	0.59	+0.5
142,347	-		EX31_RS03255	0.59	+0.7
142,357	+		EX31_RS03255	0.60	+0.0
142,358	-		EX31_RS03255	0.61	+0.8
142,358	-		EX31_RS03255	0.61	-1.4
142,358	-		EX31_RS03255	0.61	-1.5
142,444	-		EX31_RS03255	0.70	-0.1
142,568	+		EX31_RS03255	0.84	-0.5
142,568	+		EX31_RS03255	0.84	+0.4
142,568	+		EX31_RS03255	0.84	-1.1
142,569	-		EX31_RS03255	0.85	-0.7
142,575	-		EX31_RS03255	0.85	-0.2
142,623	+				+0.2
142,623	+				+1.1
142,623	+				-0.0
142,624	-				+0.2
142,624	-				-0.8
142,625	+				+0.7
142,625	+				-0.2
142,625	+				+0.5
142,625	+				+0.7
142,626	-				+1.0
142,626	-				+0.4
142,636	+				+0.7
142,636	+				+0.8
142,636	+				+1.6
142,637	-				-2.3
142,639	+				+0.2
142,639	+				-0.2
142,640	-				-0.3
142,642	+				-0.6
142,642	+				-0.9
142,642	+				-0.1
142,643	-				+1.5
142,744	+				-0.7
142,744	+				+0.1
142,744	+				-0.0
142,744	+				+0.9
142,744	+				+0.2
142,744	+				+0.7
142,744	+				-1.3
142,744	+				+0.2
142,745	-				+0.7
142,745	-				-1.0
142,745	-				-0.6
142,745	-				+1.2
142,745	-				-1.1
142,832	+				-1.5
142,840	+				-1.9
142,840	+				-1.1
142,840	+				-0.1
142,841	-				-1.5
142,853	+				-1.0
142,910	+				+0.3
143,108	+		EX31_RS03260	0.16	-2.5
143,108	+		EX31_RS03260	0.16	-1.8
143,137	+		EX31_RS03260	0.18	-0.7
143,137	+		EX31_RS03260	0.18	-0.2
143,137	+		EX31_RS03260	0.18	-0.1
143,170	+		EX31_RS03260	0.20	-2.7
143,170	+		EX31_RS03260	0.20	+0.0
143,170	+		EX31_RS03260	0.20	-0.5
143,170	+		EX31_RS03260	0.20	+0.8
143,225	+		EX31_RS03260	0.23	-0.4
143,225	+		EX31_RS03260	0.23	-1.2
143,246	+		EX31_RS03260	0.24	-0.9
143,246	+		EX31_RS03260	0.24	-2.8
143,289	+		EX31_RS03260	0.27	+0.9
143,289	+		EX31_RS03260	0.27	+0.1
143,289	+		EX31_RS03260	0.27	-0.2
143,393	+		EX31_RS03260	0.33	+1.0
143,537	+		EX31_RS03260	0.41	-1.5
143,545	+		EX31_RS03260	0.42	-1.2
143,643	+		EX31_RS03260	0.47	+0.2
143,643	+		EX31_RS03260	0.47	-0.5
143,643	+		EX31_RS03260	0.47	+0.7
143,646	+		EX31_RS03260	0.47	-0.4
143,668	+		EX31_RS03260	0.49	+0.1
143,668	+		EX31_RS03260	0.49	-0.1
143,668	+		EX31_RS03260	0.49	-0.3
143,668	+		EX31_RS03260	0.49	-0.1
143,669	-		EX31_RS03260	0.49	+1.1
143,676	+		EX31_RS03260	0.49	-1.2
143,676	+		EX31_RS03260	0.49	-0.5
143,762	+		EX31_RS03260	0.54	-0.8
143,762	+		EX31_RS03260	0.54	-2.2
143,762	+		EX31_RS03260	0.54	-1.5
143,777	-		EX31_RS03260	0.55	+0.2
143,925	+		EX31_RS03260	0.64	-0.1
143,927	+		EX31_RS03260	0.64	+0.2
143,943	+		EX31_RS03260	0.65	+0.8
143,987	+		EX31_RS03260	0.67	-0.2
144,098	+		EX31_RS03260	0.74	+0.7
144,098	+		EX31_RS03260	0.74	-0.1
144,098	+		EX31_RS03260	0.74	+0.0
144,159	+		EX31_RS03260	0.78	-1.4
144,159	+		EX31_RS03260	0.78	-1.2
144,159	+		EX31_RS03260	0.78	-2.3
144,159	+		EX31_RS03260	0.78	-1.8
144,162	+		EX31_RS03260	0.78	-1.9
144,233	+		EX31_RS03260	0.82	-0.3
144,233	+		EX31_RS03260	0.82	+0.4
144,233	+		EX31_RS03260	0.82	-3.9
144,233	+		EX31_RS03260	0.82	-3.0
144,233	+		EX31_RS03260	0.82	+0.2
144,233	+		EX31_RS03260	0.82	-3.3
144,233	+		EX31_RS03260	0.82	-1.8
144,236	+		EX31_RS03260	0.82	-2.2
144,247	+		EX31_RS03260	0.83	-1.2
144,247	+		EX31_RS03260	0.83	-0.8
144,247	+		EX31_RS03260	0.83	-0.4
144,247	+		EX31_RS03260	0.83	-0.5
144,254	+		EX31_RS03260	0.83	-2.3
144,323	+		EX31_RS03260	0.87	-3.1
144,323	+		EX31_RS03260	0.87	+0.2
144,323	+		EX31_RS03260	0.87	-0.8
144,323	+		EX31_RS03260	0.87	-0.7
144,323	+		EX31_RS03260	0.87	+0.7
144,323	+		EX31_RS03260	0.87	-0.3
144,339	+		EX31_RS03260	0.88	-0.6
144,346	+		EX31_RS03260	0.88	+0.8
144,352	+		EX31_RS03260	0.89	-0.9
144,352	+		EX31_RS03260	0.89	-0.1
144,475	+				-1.6
144,475	+				+0.7
145,016	+				+2.1
145,016	+				-0.4
145,017	-				-2.1
145,070	+				-0.2
145,090	+				-0.1
145,090	+				+1.6
145,090	+				+0.7
145,090	+				+0.2
145,090	+				+0.7
145,090	+				-1.5
145,091	-				-1.6
145,108	+				+1.7
145,108	+				+1.2
145,109	-				+0.7
145,109	-				+0.6
145,109	-				+0.4
145,160	+				+0.7
145,444	-		EX31_RS03270	0.30	+0.8