Strain Fitness in Rahnella sp. WP5 around EX31_RS03125

Experiment: L-Glutamine (N); RCH2 media; shaking

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Glutamine (N); RCH2 media; shaking
106,638	+		EX31_RS03115	0.81	-1.4
106,661	-		EX31_RS03115	0.85	-0.5
106,661	-		EX31_RS03115	0.85	+0.1
106,670	+		EX31_RS03115	0.87	+0.0
106,671	-		EX31_RS03115	0.87	+0.4
106,672	+		EX31_RS03115	0.87	+0.1
106,672	+		EX31_RS03115	0.87	-0.4
106,672	+		EX31_RS03115	0.87	+0.4
106,672	+		EX31_RS03115	0.87	+0.9
106,673	-		EX31_RS03115	0.88	-0.0
106,673	-		EX31_RS03115	0.88	+1.1
106,673	-		EX31_RS03115	0.88	+0.8
106,673	-		EX31_RS03115	0.88	+1.4
106,705	+				+0.1
106,705	+				+1.0
106,705	+				+0.7
106,706	-				-0.3
106,706	-				+0.5
106,759	+				+1.0
106,866	-		EX31_RS03120	0.13	+1.0
106,951	-		EX31_RS03120	0.24	-0.2
106,976	-		EX31_RS03120	0.27	-0.1
106,985	+		EX31_RS03120	0.28	+0.0
106,985	+		EX31_RS03120	0.28	-1.5
106,986	-		EX31_RS03120	0.28	+0.1
106,986	-		EX31_RS03120	0.28	-0.1
106,986	-		EX31_RS03120	0.28	-0.6
107,026	+		EX31_RS03120	0.33	+0.8
107,026	+		EX31_RS03120	0.33	-0.1
107,027	-		EX31_RS03120	0.33	-0.9
107,102	+		EX31_RS03120	0.43	-0.3
107,113	+		EX31_RS03120	0.44	+0.9
107,113	+		EX31_RS03120	0.44	+0.0
107,113	+		EX31_RS03120	0.44	+0.7
107,113	+		EX31_RS03120	0.44	-0.5
107,114	-		EX31_RS03120	0.44	+1.2
107,195	+		EX31_RS03120	0.55	-0.1
107,195	+		EX31_RS03120	0.55	-0.4
107,195	+		EX31_RS03120	0.55	+0.8
107,196	-		EX31_RS03120	0.55	+0.7
107,199	+		EX31_RS03120	0.55	+0.0
107,200	-		EX31_RS03120	0.55	+0.1
107,212	+		EX31_RS03120	0.57	+0.5
107,213	-		EX31_RS03120	0.57	+1.4
107,324	+		EX31_RS03120	0.71	+0.2
107,342	-		EX31_RS03120	0.73	+0.3
107,431	+		EX31_RS03120	0.84	+0.3
107,438	+		EX31_RS03120	0.85	-0.8
107,439	-		EX31_RS03120	0.85	-0.5
107,442	+		EX31_RS03120	0.85	+0.4
107,442	+		EX31_RS03120	0.85	+1.0
107,442	+		EX31_RS03120	0.85	+0.8
107,442	+		EX31_RS03120	0.85	+0.6
107,442	+		EX31_RS03120	0.85	+0.1
107,443	-		EX31_RS03120	0.86	-1.1
107,443	-		EX31_RS03120	0.86	+4.2
107,443	-		EX31_RS03120	0.86	-1.1
107,443	-		EX31_RS03120	0.86	-2.1
107,443	-		EX31_RS03120	0.86	+0.3
107,443	-		EX31_RS03120	0.86	+0.2
107,621	+				+0.9
107,656	+				+0.8
107,656	+				+0.6
107,681	+				+0.3
107,682	-				-0.4
107,682	-				+0.7
107,682	-				+0.5
107,738	+				+0.2
107,738	+				+0.4
107,739	-				-0.1
107,739	-				-0.1
107,739	-				-0.2
107,792	+				+0.6
107,792	+				+0.8
107,793	-				+1.1
107,807	+				+0.7
107,808	-				-0.1
107,808	-				-0.0
107,808	-				-0.3
107,808	-				+0.7
107,808	-				+0.5
107,808	-				-0.6
107,852	-		EX31_RS03125	0.11	-0.4
107,994	-		EX31_RS03125	0.17	+1.1
107,994	-		EX31_RS03125	0.17	+0.3
107,994	-		EX31_RS03125	0.17	-0.4
108,032	+		EX31_RS03125	0.19	+0.2
108,032	+		EX31_RS03125	0.19	+0.5
108,032	+		EX31_RS03125	0.19	-0.0
108,033	-		EX31_RS03125	0.19	+0.7
108,033	-		EX31_RS03125	0.19	-0.1
108,033	-		EX31_RS03125	0.19	+2.6
108,033	-		EX31_RS03125	0.19	+1.2
108,041	+		EX31_RS03125	0.19	-0.6
108,042	-		EX31_RS03125	0.19	-2.8
108,044	+		EX31_RS03125	0.19	+0.8
108,045	-		EX31_RS03125	0.19	+0.2
108,045	-		EX31_RS03125	0.19	+0.2
108,045	-		EX31_RS03125	0.19	+0.7
108,137	+		EX31_RS03125	0.23	+0.8
108,137	+		EX31_RS03125	0.23	+0.5
108,137	+		EX31_RS03125	0.23	+0.4
108,137	+		EX31_RS03125	0.23	-0.2
108,197	+		EX31_RS03125	0.25	+0.0
108,197	+		EX31_RS03125	0.25	+0.2
108,207	-		EX31_RS03125	0.26	-0.0
108,251	+		EX31_RS03125	0.28	+1.2
108,252	-		EX31_RS03125	0.28	+0.9
108,252	-		EX31_RS03125	0.28	-0.2
108,292	+		EX31_RS03125	0.29	-1.0
108,292	+		EX31_RS03125	0.29	+0.6
108,293	-		EX31_RS03125	0.29	+0.0
108,328	+		EX31_RS03125	0.31	-0.3
108,359	+		EX31_RS03125	0.32	-0.2
108,374	+		EX31_RS03125	0.33	+0.3
108,374	+		EX31_RS03125	0.33	+0.8
108,374	+		EX31_RS03125	0.33	-0.2
108,375	-		EX31_RS03125	0.33	+0.9
108,375	-		EX31_RS03125	0.33	+1.1
108,439	+		EX31_RS03125	0.35	-0.1
108,439	+		EX31_RS03125	0.35	-0.1
108,440	-		EX31_RS03125	0.35	+0.8
108,440	-		EX31_RS03125	0.35	+1.7
108,440	-		EX31_RS03125	0.35	+1.5
108,442	+		EX31_RS03125	0.35	+0.5
108,442	+		EX31_RS03125	0.35	+0.0
108,443	-		EX31_RS03125	0.35	+0.4
108,443	-		EX31_RS03125	0.35	-0.2
108,463	+		EX31_RS03125	0.36	-0.2
108,463	+		EX31_RS03125	0.36	-0.2
108,482	+		EX31_RS03125	0.37	-0.1
108,482	+		EX31_RS03125	0.37	+0.1
108,482	+		EX31_RS03125	0.37	+0.2
108,482	+		EX31_RS03125	0.37	+0.8
108,482	+		EX31_RS03125	0.37	-1.6
108,483	-		EX31_RS03125	0.37	-0.7
108,483	-		EX31_RS03125	0.37	+0.1
108,484	+		EX31_RS03125	0.37	-0.3
108,485	-		EX31_RS03125	0.37	-0.8
108,485	-		EX31_RS03125	0.37	+0.9
108,560	+		EX31_RS03125	0.40	+0.4
108,621	+		EX31_RS03125	0.43	-1.3
108,621	+		EX31_RS03125	0.43	-0.6
108,621	+		EX31_RS03125	0.43	-1.7
108,621	+		EX31_RS03125	0.43	-0.8
108,621	+		EX31_RS03125	0.43	+1.2
108,622	-		EX31_RS03125	0.43	-0.3
108,622	-		EX31_RS03125	0.43	+0.0
108,622	-		EX31_RS03125	0.43	-0.1
108,622	-		EX31_RS03125	0.43	-0.4
108,625	+		EX31_RS03125	0.43	-1.4
108,625	+		EX31_RS03125	0.43	-0.5
108,626	-		EX31_RS03125	0.43	-0.8
108,626	-		EX31_RS03125	0.43	-0.1
108,632	+		EX31_RS03125	0.43	+0.2
108,632	+		EX31_RS03125	0.43	+0.3
108,633	-		EX31_RS03125	0.43	-0.1
108,661	+		EX31_RS03125	0.44	+0.0
108,662	-		EX31_RS03125	0.44	+2.2
108,662	-		EX31_RS03125	0.44	-1.0
108,681	-		EX31_RS03125	0.45	+0.2
108,701	+		EX31_RS03125	0.46	-0.1
108,701	+		EX31_RS03125	0.46	+0.1
108,732	+		EX31_RS03125	0.47	-0.4
108,778	+		EX31_RS03125	0.49	-0.1
108,814	+		EX31_RS03125	0.51	-0.8
108,815	-		EX31_RS03125	0.51	+0.0
108,870	-		EX31_RS03125	0.53	-0.5
108,881	+		EX31_RS03125	0.53	+1.2
108,882	-		EX31_RS03125	0.53	+2.0
108,887	+		EX31_RS03125	0.54	-1.5
108,887	+		EX31_RS03125	0.54	+1.1
108,887	+		EX31_RS03125	0.54	+0.4
108,887	+		EX31_RS03125	0.54	+0.3
108,887	+		EX31_RS03125	0.54	-1.6
108,888	-		EX31_RS03125	0.54	+0.1
108,888	-		EX31_RS03125	0.54	-0.4
108,890	+		EX31_RS03125	0.54	-0.3
108,959	+		EX31_RS03125	0.56	+2.2
108,960	-		EX31_RS03125	0.57	+0.7
108,960	-		EX31_RS03125	0.57	+0.9
108,960	-		EX31_RS03125	0.57	-0.3
109,055	+		EX31_RS03125	0.60	-0.6
109,055	+		EX31_RS03125	0.60	+0.0
109,055	+		EX31_RS03125	0.60	+1.2
109,055	+		EX31_RS03125	0.60	+0.7
109,055	+		EX31_RS03125	0.60	+0.4
109,055	+		EX31_RS03125	0.60	+0.7
109,055	+		EX31_RS03125	0.60	+1.0
109,056	-		EX31_RS03125	0.60	-0.4
109,056	-		EX31_RS03125	0.60	-0.8
109,056	-		EX31_RS03125	0.60	+0.7
109,056	-		EX31_RS03125	0.60	-1.2
109,070	+		EX31_RS03125	0.61	+0.8
109,070	+		EX31_RS03125	0.61	+0.4
109,070	+		EX31_RS03125	0.61	+0.6
109,071	-		EX31_RS03125	0.61	+0.1
109,071	-		EX31_RS03125	0.61	-0.3
109,153	+		EX31_RS03125	0.64	+0.4
109,176	-		EX31_RS03125	0.65	+1.4
109,222	+		EX31_RS03125	0.67	-0.6
109,222	+		EX31_RS03125	0.67	-1.6
109,222	+		EX31_RS03125	0.67	+1.1
109,222	+		EX31_RS03125	0.67	-0.4
109,223	-		EX31_RS03125	0.67	+0.9
109,223	-		EX31_RS03125	0.67	+0.2
109,259	+		EX31_RS03125	0.69	+1.2
109,260	-		EX31_RS03125	0.69	+1.0
109,260	-		EX31_RS03125	0.69	+0.1
109,260	-		EX31_RS03125	0.69	+1.2
109,260	-		EX31_RS03125	0.69	-0.2
109,325	+		EX31_RS03125	0.71	-0.6
109,347	-		EX31_RS03125	0.72	-0.0
109,347	-		EX31_RS03125	0.72	-0.3
109,403	+		EX31_RS03125	0.75	-1.3
109,403	+		EX31_RS03125	0.75	+0.8
109,422	-		EX31_RS03125	0.75	-0.5
109,505	-		EX31_RS03125	0.79	+0.2
109,512	+		EX31_RS03125	0.79	+0.0
109,512	+		EX31_RS03125	0.79	+0.7
109,512	+		EX31_RS03125	0.79	+0.0
109,512	+		EX31_RS03125	0.79	-2.0
109,513	-		EX31_RS03125	0.79	+0.9
109,517	-		EX31_RS03125	0.79	+0.5
109,517	-		EX31_RS03125	0.79	-2.7
109,613	+		EX31_RS03125	0.83	+0.7
109,613	+		EX31_RS03125	0.83	-0.4
109,613	+		EX31_RS03125	0.83	-0.1
109,613	+		EX31_RS03125	0.83	-0.8
109,614	-		EX31_RS03125	0.83	+0.4
109,614	-		EX31_RS03125	0.83	-0.5
109,614	-		EX31_RS03125	0.83	-0.8
109,678	+		EX31_RS03125	0.86	-0.5
109,753	+		EX31_RS03125	0.89	+0.3
109,754	-		EX31_RS03125	0.89	-0.4
109,804	+				-0.2
109,856	+				+0.1
109,856	+				-1.0
109,856	+				-1.0
109,856	+				+0.1
109,856	+				-0.5
109,857	-				-0.6
109,857	-				-1.8
109,869	+				-1.1
109,870	-				-0.1
109,870	-				+2.1
109,870	-				+0.5
110,014	+				+0.2
110,054	+				+0.4
110,077	-				-2.3
110,077	-				-0.5
110,124	+		EX31_RS03130	0.11	+0.0
110,125	-		EX31_RS03130	0.11	+0.3
110,125	-		EX31_RS03130	0.11	-0.7
110,125	-		EX31_RS03130	0.11	-0.1
110,192	+		EX31_RS03130	0.18	-0.0
110,192	+		EX31_RS03130	0.18	-0.3
110,192	+		EX31_RS03130	0.18	-3.1
110,192	+		EX31_RS03130	0.18	-1.1
110,193	-		EX31_RS03130	0.18	+0.8
110,193	-		EX31_RS03130	0.18	+1.4
110,193	-		EX31_RS03130	0.18	-0.8
110,193	-		EX31_RS03130	0.18	-0.5
110,199	+		EX31_RS03130	0.18	-1.1
110,200	-		EX31_RS03130	0.19	-0.3
110,200	-		EX31_RS03130	0.19	+1.9
110,214	+		EX31_RS03130	0.20	+0.4
110,232	+		EX31_RS03130	0.22	-1.1
110,233	-		EX31_RS03130	0.22	+1.1
110,233	-		EX31_RS03130	0.22	+0.6
110,290	+		EX31_RS03130	0.28	-0.9
110,291	-		EX31_RS03130	0.28	+0.7
110,311	+		EX31_RS03130	0.30	-0.8
110,311	+		EX31_RS03130	0.30	-0.3
110,311	+		EX31_RS03130	0.30	-0.2
110,315	+		EX31_RS03130	0.30	+1.3
110,357	-		EX31_RS03130	0.35	+0.2
110,357	-		EX31_RS03130	0.35	+1.1
110,358	+		EX31_RS03130	0.35	+0.0
110,358	+		EX31_RS03130	0.35	+1.2
110,358	+		EX31_RS03130	0.35	-0.5
110,359	-		EX31_RS03130	0.35	+0.7
110,371	-		EX31_RS03130	0.36	-1.4
110,438	+		EX31_RS03130	0.43	+0.7
110,438	+		EX31_RS03130	0.43	+1.3
110,438	+		EX31_RS03130	0.43	+0.2
110,439	-		EX31_RS03130	0.43	-0.2
110,439	-		EX31_RS03130	0.43	+1.2
110,446	+		EX31_RS03130	0.44	-0.0
110,446	+		EX31_RS03130	0.44	-0.2
110,446	+		EX31_RS03130	0.44	+1.7
110,447	-		EX31_RS03130	0.44	+0.6
110,488	+		EX31_RS03130	0.48	-0.8
110,488	+		EX31_RS03130	0.48	+1.0
110,488	+		EX31_RS03130	0.48	-0.1
110,488	+		EX31_RS03130	0.48	+0.9
110,488	+		EX31_RS03130	0.48	-0.1
110,489	-		EX31_RS03130	0.48	-0.0
110,489	-		EX31_RS03130	0.48	-0.0
110,489	-		EX31_RS03130	0.48	+1.5
110,489	-		EX31_RS03130	0.48	+0.4
110,489	-		EX31_RS03130	0.48	-0.4
110,489	-		EX31_RS03130	0.48	-0.1
110,490	+		EX31_RS03130	0.49	+1.0
110,490	+		EX31_RS03130	0.49	-0.5
110,490	+		EX31_RS03130	0.49	-1.2
110,491	-		EX31_RS03130	0.49	+0.3
110,491	-		EX31_RS03130	0.49	+0.2
110,549	+		EX31_RS03130	0.55	+0.1
110,549	+		EX31_RS03130	0.55	-2.3
110,549	+		EX31_RS03130	0.55	-0.6
110,549	+		EX31_RS03130	0.55	+1.8
110,550	-		EX31_RS03130	0.55	-0.2
110,550	-		EX31_RS03130	0.55	-0.6
110,550	-		EX31_RS03130	0.55	-0.7
110,550	-		EX31_RS03130	0.55	-0.4
110,550	-		EX31_RS03130	0.55	+0.2
110,550	-		EX31_RS03130	0.55	+1.7
110,550	-		EX31_RS03130	0.55	+0.6
110,620	+		EX31_RS03130	0.62	-0.3
110,620	+		EX31_RS03130	0.62	-0.4
110,620	+		EX31_RS03130	0.62	-2.1
110,620	+		EX31_RS03130	0.62	-0.7
110,620	+		EX31_RS03130	0.62	-1.2
110,623	-		EX31_RS03130	0.62	+0.8
110,623	-		EX31_RS03130	0.62	+0.7
110,694	+		EX31_RS03130	0.70	-1.3
110,694	+		EX31_RS03130	0.70	-0.8
110,694	+		EX31_RS03130	0.70	-1.2
110,694	+		EX31_RS03130	0.70	-1.5
110,695	-		EX31_RS03130	0.70	-1.8
110,695	-		EX31_RS03130	0.70	-1.3
110,698	-		EX31_RS03130	0.70	+0.4
110,698	-		EX31_RS03130	0.70	-1.5
110,698	-		EX31_RS03130	0.70	-0.5
110,706	-		EX31_RS03130	0.71	+0.6
110,729	-		EX31_RS03130	0.73	-0.1
110,729	-		EX31_RS03130	0.73	+0.3
110,829	+		EX31_RS03130	0.83	+0.2
110,830	-		EX31_RS03130	0.84	+1.2
110,905	+				+1.6
110,905	+				-0.1
110,905	+				-0.3
110,906	-				-0.0
110,906	-				+0.3
110,906	-				+0.1
110,907	+				-1.8
110,907	+				+0.4
110,907	+				+0.4
110,908	-				-1.4
110,908	-				+1.0
110,919	-				-0.0
110,919	-				-0.4
110,949	+				-1.1
110,949	+				-0.4
110,950	-				-0.3
110,950	-				-0.2
110,953	+				+1.1
110,953	+				+0.9
110,953	+				+1.9
110,953	+				+0.9
110,953	+				+0.0
110,954	-				+0.0
110,954	-				+1.8
110,954	-				+0.4
110,954	-				+0.9
110,954	-				+0.0
110,954	-				-0.7
110,954	-				+0.1
110,954	-				-0.2
110,954	-				+0.2
110,983	+				-1.4
110,983	+				-0.9
110,983	+				+0.9
110,983	+				+1.0
110,984	-				+0.5
110,984	-				+0.7
110,984	-				+0.5
110,984	-				-0.3
110,984	-				+2.2
110,984	-				-0.8
110,984	-				-0.2
110,984	-				-0.5
110,984	-				+1.9