Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CCNA_00754 and CCNA_00755 are separated by 147 nucleotides CCNA_00755 and CCNA_00756 overlap by 43 nucleotides CCNA_00756 and CCNA_00757 are separated by 135 nucleotides CCNA_00757 and CCNA_00758 are separated by 120 nucleotides CCNA_00758 and CCNA_00759 are separated by 199 nucleotides
CCNA_00754: CCNA_00754 - Nodulin-21 / CCC1-related protein, at 812,595 to 813,296
_00754
CCNA_00755: CCNA_00755 - tellurium resistance protein terB, at 813,444 to 813,884
_00755
CCNA_00756: CCNA_00756 - hypothetical protein, at 813,842 to 814,120
_00756
CCNA_00757: CCNA_00757 - lysyl-tRNA synthetase, at 814,256 to 815,314
_00757
CCNA_00758: CCNA_00758 - translation elongation factor P EF-P, at 815,435 to 816,001
_00758
CCNA_00759: CCNA_00759 - TonB-dependent receptor, at 816,201 to 818,675
_00759
Position (kb) 814
815
816 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 813.281 kb on + strand at 813.291 kb on + strand at 813.291 kb on + strand at 813.300 kb on - strand at 813.313 kb on - strand at 813.317 kb on - strand at 813.320 kb on + strand at 813.320 kb on + strand at 813.320 kb on + strand at 813.328 kb on - strand at 813.333 kb on - strand at 813.344 kb on + strand at 813.344 kb on + strand at 813.344 kb on + strand at 813.344 kb on + strand at 813.344 kb on + strand at 813.344 kb on + strand at 813.344 kb on + strand at 813.344 kb on + strand at 813.344 kb on + strand at 813.344 kb on + strand at 813.344 kb on + strand at 813.344 kb on + strand at 813.352 kb on - strand at 813.352 kb on - strand at 813.352 kb on - strand at 813.352 kb on - strand at 813.352 kb on - strand at 813.352 kb on - strand at 813.352 kb on - strand at 813.352 kb on - strand at 813.366 kb on + strand at 813.373 kb on + strand at 813.373 kb on + strand at 813.373 kb on + strand at 813.373 kb on + strand at 813.373 kb on + strand at 813.373 kb on + strand at 813.373 kb on + strand at 813.373 kb on + strand at 813.373 kb on + strand at 813.373 kb on + strand at 813.373 kb on + strand at 813.373 kb on + strand at 813.373 kb on + strand at 813.373 kb on + strand at 813.373 kb on + strand at 813.373 kb on + strand at 813.373 kb on + strand at 813.381 kb on - strand at 813.381 kb on - strand at 813.381 kb on - strand at 813.381 kb on - strand at 813.381 kb on - strand at 813.381 kb on - strand at 813.381 kb on - strand at 813.381 kb on - strand at 813.381 kb on - strand at 813.381 kb on - strand at 813.381 kb on - strand at 813.381 kb on - strand at 813.381 kb on - strand at 813.381 kb on - strand at 813.386 kb on + strand at 813.427 kb on + strand at 813.442 kb on + strand at 813.450 kb on - strand at 813.450 kb on - strand at 813.452 kb on + strand at 813.464 kb on + strand at 813.470 kb on + strand at 813.484 kb on - strand at 813.497 kb on - strand, within CCNA_00755 at 813.549 kb on + strand, within CCNA_00755 at 813.549 kb on + strand, within CCNA_00755 at 813.557 kb on - strand, within CCNA_00755 at 813.562 kb on + strand, within CCNA_00755 at 813.562 kb on - strand, within CCNA_00755 at 813.569 kb on + strand, within CCNA_00755 at 813.602 kb on + strand, within CCNA_00755 at 813.610 kb on - strand, within CCNA_00755 at 813.621 kb on - strand, within CCNA_00755 at 813.621 kb on - strand, within CCNA_00755 at 813.621 kb on - strand, within CCNA_00755 at 813.621 kb on - strand, within CCNA_00755 at 813.626 kb on - strand, within CCNA_00755 at 813.678 kb on + strand, within CCNA_00755 at 813.678 kb on + strand, within CCNA_00755 at 813.686 kb on - strand, within CCNA_00755 at 813.686 kb on - strand, within CCNA_00755 at 813.686 kb on - strand, within CCNA_00755 at 813.691 kb on + strand, within CCNA_00755 at 813.693 kb on + strand, within CCNA_00755 at 813.693 kb on + strand, within CCNA_00755 at 813.710 kb on - strand, within CCNA_00755 at 813.866 kb on - strand at 813.866 kb on - strand at 813.866 kb on - strand at 813.866 kb on - strand at 813.879 kb on + strand at 813.884 kb on + strand at 813.913 kb on + strand, within CCNA_00756 at 813.916 kb on - strand, within CCNA_00756 at 814.011 kb on - strand, within CCNA_00756 at 814.013 kb on + strand, within CCNA_00756 at 814.044 kb on - strand, within CCNA_00756 at 814.044 kb on - strand, within CCNA_00756 at 814.044 kb on - strand, within CCNA_00756 at 814.044 kb on - strand, within CCNA_00756 at 814.074 kb on + strand, within CCNA_00756 at 814.126 kb on - strand at 814.146 kb on + strand at 814.148 kb on - strand at 814.164 kb on + strand at 814.164 kb on + strand at 814.172 kb on - strand at 814.172 kb on - strand at 814.181 kb on - strand at 814.212 kb on + strand at 814.253 kb on + strand at 814.259 kb on - strand at 814.259 kb on - strand at 814.325 kb on + strand at 814.331 kb on + strand at 814.331 kb on + strand at 814.331 kb on + strand at 814.339 kb on - strand at 814.339 kb on - strand at 814.339 kb on - strand at 814.374 kb on + strand, within CCNA_00757 at 814.374 kb on + strand, within CCNA_00757 at 814.415 kb on - strand, within CCNA_00757 at 814.421 kb on - strand, within CCNA_00757 at 814.493 kb on - strand, within CCNA_00757 at 814.495 kb on + strand, within CCNA_00757 at 814.498 kb on - strand, within CCNA_00757 at 814.498 kb on - strand, within CCNA_00757 at 814.503 kb on - strand, within CCNA_00757 at 814.503 kb on - strand, within CCNA_00757 at 814.503 kb on - strand, within CCNA_00757 at 814.508 kb on + strand, within CCNA_00757 at 814.516 kb on + strand, within CCNA_00757 at 814.523 kb on + strand, within CCNA_00757 at 814.530 kb on + strand, within CCNA_00757 at 814.559 kb on + strand, within CCNA_00757 at 814.559 kb on + strand, within CCNA_00757 at 814.559 kb on + strand, within CCNA_00757 at 814.559 kb on + strand, within CCNA_00757 at 814.559 kb on + strand, within CCNA_00757 at 814.567 kb on - strand, within CCNA_00757 at 814.567 kb on - strand, within CCNA_00757 at 814.567 kb on - strand, within CCNA_00757 at 814.567 kb on - strand, within CCNA_00757 at 814.567 kb on - strand, within CCNA_00757 at 814.567 kb on - strand, within CCNA_00757 at 814.567 kb on - strand, within CCNA_00757 at 814.567 kb on - strand, within CCNA_00757 at 814.567 kb on - strand, within CCNA_00757 at 814.567 kb on - strand, within CCNA_00757 at 814.567 kb on - strand, within CCNA_00757 at 814.602 kb on - strand, within CCNA_00757 at 814.624 kb on + strand, within CCNA_00757 at 814.631 kb on - strand, within CCNA_00757 at 814.739 kb on - strand, within CCNA_00757 at 814.825 kb on + strand, within CCNA_00757 at 814.833 kb on - strand, within CCNA_00757 at 814.943 kb on + strand, within CCNA_00757 at 814.945 kb on + strand, within CCNA_00757 at 814.951 kb on - strand, within CCNA_00757 at 814.970 kb on - strand, within CCNA_00757 at 814.992 kb on + strand, within CCNA_00757 at 814.998 kb on + strand, within CCNA_00757 at 814.998 kb on + strand, within CCNA_00757 at 814.999 kb on - strand, within CCNA_00757 at 815.000 kb on - strand, within CCNA_00757 at 815.006 kb on - strand, within CCNA_00757 at 815.021 kb on + strand, within CCNA_00757 at 815.074 kb on + strand, within CCNA_00757 at 815.074 kb on - strand, within CCNA_00757 at 815.082 kb on + strand, within CCNA_00757 at 815.090 kb on - strand, within CCNA_00757 at 815.102 kb on + strand, within CCNA_00757 at 815.102 kb on + strand, within CCNA_00757 at 815.134 kb on - strand, within CCNA_00757 at 815.139 kb on + strand, within CCNA_00757 at 815.177 kb on - strand, within CCNA_00757 at 815.194 kb on + strand, within CCNA_00757 at 815.194 kb on - strand, within CCNA_00757 at 815.194 kb on - strand, within CCNA_00757 at 815.194 kb on - strand, within CCNA_00757 at 815.202 kb on - strand, within CCNA_00757 at 815.202 kb on - strand, within CCNA_00757 at 815.259 kb on + strand at 815.298 kb on + strand at 815.301 kb on - strand at 815.309 kb on + strand at 815.312 kb on - strand at 815.322 kb on + strand at 815.372 kb on + strand at 815.374 kb on + strand at 815.380 kb on - strand at 815.415 kb on + strand at 815.415 kb on + strand at 815.425 kb on + strand at 815.577 kb on + strand, within CCNA_00758 at 815.995 kb on + strand at 815.995 kb on + strand at 815.995 kb on + strand at 815.995 kb on + strand at 815.995 kb on + strand at 815.995 kb on + strand at 816.022 kb on + strand at 816.022 kb on + strand at 816.022 kb on + strand at 816.106 kb on + strand at 816.119 kb on + strand at 816.190 kb on + strand at 816.198 kb on - strand at 816.198 kb on - strand at 816.199 kb on + strand at 816.199 kb on + strand at 816.289 kb on + strand at 816.314 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 813,281 + +0.7 813,291 + +0.5 813,291 + +0.8 813,300 - -2.2 813,313 - +0.3 813,317 - +1.5 813,320 + +0.4 813,320 + +0.2 813,320 + +0.6 813,328 - -0.5 813,333 - +0.3 813,344 + +1.1 813,344 + -0.7 813,344 + +0.5 813,344 + +0.3 813,344 + +0.1 813,344 + +0.5 813,344 + +1.3 813,344 + +0.0 813,344 + -0.1 813,344 + +1.2 813,344 + +0.6 813,344 + -1.5 813,352 - +0.9 813,352 - +1.1 813,352 - +1.0 813,352 - +0.3 813,352 - -0.5 813,352 - +0.3 813,352 - +0.1 813,352 - +0.1 813,366 + +1.1 813,373 + -0.7 813,373 + +0.9 813,373 + -0.6 813,373 + +1.0 813,373 + +0.7 813,373 + +0.5 813,373 + +0.9 813,373 + +0.9 813,373 + +0.4 813,373 + +0.5 813,373 + +0.3 813,373 + +2.5 813,373 + +0.2 813,373 + +0.0 813,373 + +0.3 813,373 + +0.4 813,373 + +0.3 813,381 - -0.3 813,381 - -1.3 813,381 - -0.1 813,381 - +0.7 813,381 - +1.3 813,381 - +0.9 813,381 - -0.3 813,381 - +0.4 813,381 - -0.2 813,381 - +0.5 813,381 - -0.6 813,381 - -1.2 813,381 - +0.4 813,381 - -1.6 813,386 + -0.9 813,427 + +0.6 813,442 + +1.1 813,450 - -1.3 813,450 - +0.5 813,452 + -0.7 813,464 + +0.4 813,470 + +0.7 813,484 - -0.5 813,497 - CCNA_00755 0.12 +0.1 813,549 + CCNA_00755 0.24 -1.9 813,549 + CCNA_00755 0.24 -0.6 813,557 - CCNA_00755 0.26 +0.3 813,562 + CCNA_00755 0.27 -0.7 813,562 - CCNA_00755 0.27 +0.6 813,569 + CCNA_00755 0.28 -0.9 813,602 + CCNA_00755 0.36 +0.4 813,610 - CCNA_00755 0.38 -0.5 813,621 - CCNA_00755 0.40 -0.8 813,621 - CCNA_00755 0.40 -0.1 813,621 - CCNA_00755 0.40 +1.0 813,621 - CCNA_00755 0.40 +0.0 813,626 - CCNA_00755 0.41 +0.3 813,678 + CCNA_00755 0.53 +0.5 813,678 + CCNA_00755 0.53 -0.5 813,686 - CCNA_00755 0.55 -0.9 813,686 - CCNA_00755 0.55 +0.4 813,686 - CCNA_00755 0.55 +0.3 813,691 + CCNA_00755 0.56 +0.5 813,693 + CCNA_00755 0.56 +0.1 813,693 + CCNA_00755 0.56 -1.6 813,710 - CCNA_00755 0.60 -0.4 813,866 - +1.0 813,866 - +0.2 813,866 - +1.7 813,866 - +0.0 813,879 + -1.2 813,884 + +1.0 813,913 + CCNA_00756 0.25 -0.9 813,916 - CCNA_00756 0.27 -0.5 814,011 - CCNA_00756 0.61 +1.7 814,013 + CCNA_00756 0.61 -0.2 814,044 - CCNA_00756 0.72 +1.0 814,044 - CCNA_00756 0.72 +1.5 814,044 - CCNA_00756 0.72 +1.7 814,044 - CCNA_00756 0.72 +1.5 814,074 + CCNA_00756 0.83 +1.0 814,126 - +1.2 814,146 + +0.1 814,148 - +1.0 814,164 + -1.8 814,164 + -0.3 814,172 - +1.1 814,172 - +0.6 814,181 - +1.2 814,212 + +0.3 814,253 + -1.3 814,259 - +0.3 814,259 - -0.5 814,325 + -2.5 814,331 + -0.1 814,331 + -0.9 814,331 + -1.4 814,339 - -1.9 814,339 - -1.8 814,339 - -0.8 814,374 + CCNA_00757 0.11 -1.9 814,374 + CCNA_00757 0.11 -1.4 814,415 - CCNA_00757 0.15 -2.9 814,421 - CCNA_00757 0.16 -2.5 814,493 - CCNA_00757 0.22 -0.5 814,495 + CCNA_00757 0.23 -2.2 814,498 - CCNA_00757 0.23 -0.4 814,498 - CCNA_00757 0.23 -0.9 814,503 - CCNA_00757 0.23 -1.6 814,503 - CCNA_00757 0.23 -0.3 814,503 - CCNA_00757 0.23 -1.1 814,508 + CCNA_00757 0.24 +1.2 814,516 + CCNA_00757 0.25 -1.8 814,523 + CCNA_00757 0.25 -1.6 814,530 + CCNA_00757 0.26 -0.1 814,559 + CCNA_00757 0.29 +0.1 814,559 + CCNA_00757 0.29 -1.1 814,559 + CCNA_00757 0.29 -1.7 814,559 + CCNA_00757 0.29 -2.8 814,559 + CCNA_00757 0.29 -2.0 814,567 - CCNA_00757 0.29 +0.8 814,567 - CCNA_00757 0.29 -1.1 814,567 - CCNA_00757 0.29 -2.4 814,567 - CCNA_00757 0.29 -1.7 814,567 - CCNA_00757 0.29 -1.8 814,567 - CCNA_00757 0.29 -0.2 814,567 - CCNA_00757 0.29 -1.0 814,567 - CCNA_00757 0.29 -0.3 814,567 - CCNA_00757 0.29 -0.1 814,567 - CCNA_00757 0.29 -0.5 814,567 - CCNA_00757 0.29 -2.4 814,602 - CCNA_00757 0.33 -0.8 814,624 + CCNA_00757 0.35 -3.0 814,631 - CCNA_00757 0.35 -0.4 814,739 - CCNA_00757 0.46 +0.4 814,825 + CCNA_00757 0.54 -1.2 814,833 - CCNA_00757 0.54 -1.5 814,943 + CCNA_00757 0.65 +0.2 814,945 + CCNA_00757 0.65 -1.8 814,951 - CCNA_00757 0.66 -2.4 814,970 - CCNA_00757 0.67 -1.8 814,992 + CCNA_00757 0.69 -0.7 814,998 + CCNA_00757 0.70 -2.5 814,998 + CCNA_00757 0.70 -2.9 814,999 - CCNA_00757 0.70 -1.5 815,000 - CCNA_00757 0.70 -0.3 815,006 - CCNA_00757 0.71 -0.7 815,021 + CCNA_00757 0.72 -1.8 815,074 + CCNA_00757 0.77 -2.2 815,074 - CCNA_00757 0.77 -1.0 815,082 + CCNA_00757 0.78 -1.4 815,090 - CCNA_00757 0.79 -1.6 815,102 + CCNA_00757 0.80 -1.1 815,102 + CCNA_00757 0.80 -2.4 815,134 - CCNA_00757 0.83 -2.1 815,139 + CCNA_00757 0.83 +0.5 815,177 - CCNA_00757 0.87 +0.2 815,194 + CCNA_00757 0.89 -3.6 815,194 - CCNA_00757 0.89 +0.2 815,194 - CCNA_00757 0.89 -2.4 815,194 - CCNA_00757 0.89 -1.8 815,202 - CCNA_00757 0.89 -2.9 815,202 - CCNA_00757 0.89 -1.0 815,259 + +0.9 815,298 + -1.0 815,301 - -1.8 815,309 + -0.6 815,312 - +0.2 815,322 + -1.8 815,372 + +1.2 815,374 + +1.0 815,380 - -0.8 815,415 + +2.5 815,415 + +1.1 815,425 + +0.7 815,577 + CCNA_00758 0.25 -0.8 815,995 + +1.3 815,995 + +1.9 815,995 + +1.5 815,995 + +1.5 815,995 + +0.9 815,995 + +1.7 816,022 + +1.3 816,022 + +0.9 816,022 + +1.6 816,106 + +0.6 816,119 + +0.6 816,190 + -1.8 816,198 - +0.6 816,198 - +1.0 816,199 + -0.7 816,199 + -1.0 816,289 + +0.6 816,314 + -0.8
Or see this region's nucleotide sequence