Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS25235

Experiment: R2A with Sisomicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.008 mg/ml
6,141,290	+				+0.5
6,142,032	+				-1.4
6,142,038	-				-0.5
6,142,153	+				+0.1
6,142,156	-				-0.3
6,142,309	+				+2.1
6,142,417	+		CA265_RS25235	0.14	+1.4
6,142,430	+		CA265_RS25235	0.15	+1.3
6,142,462	+		CA265_RS25235	0.17	+1.9
6,142,519	+		CA265_RS25235	0.21	+1.5
6,142,520	-		CA265_RS25235	0.21	+1.1
6,142,586	-		CA265_RS25235	0.25	+2.2
6,142,599	-		CA265_RS25235	0.26	+2.1
6,142,670	-		CA265_RS25235	0.31	+2.0
6,142,745	+		CA265_RS25235	0.36	+2.5
6,142,748	+		CA265_RS25235	0.36	+1.6
6,142,873	-		CA265_RS25235	0.44	+1.8
6,142,944	-		CA265_RS25235	0.49	+1.6
6,142,946	-		CA265_RS25235	0.49	+1.1
6,143,016	-		CA265_RS25235	0.53	+2.2
6,143,016	-		CA265_RS25235	0.53	+1.6
6,143,031	-		CA265_RS25235	0.54	+1.7
6,143,138	-		CA265_RS25235	0.61	+0.4
6,143,213	-		CA265_RS25235	0.66	+1.7
6,143,237	-		CA265_RS25235	0.68	+0.9
6,143,237	-		CA265_RS25235	0.68	+1.7
6,143,237	-		CA265_RS25235	0.68	+0.8
6,143,237	-		CA265_RS25235	0.68	+2.2
6,143,261	-		CA265_RS25235	0.70	-2.0
6,143,312	-				+2.6
6,143,335	-		CA265_RS25235	0.74	+2.6
6,143,402	+		CA265_RS25235	0.79	+0.5
6,143,405	-		CA265_RS25235	0.79	+1.0
6,143,500	-		CA265_RS25235	0.85	+2.3
6,143,500	-		CA265_RS25235	0.85	+1.9
6,143,504	-		CA265_RS25235	0.86	+2.1
6,143,581	+				-0.2
6,143,581	+				+3.7
6,143,587	-				+1.7
6,143,606	-				+1.6
6,143,612	+				+1.6
6,143,636	-				+1.4
6,143,685	-				+2.2
6,143,696	-				+1.0
6,143,806	-				-0.2
6,143,813	-				+1.0
6,143,874	+		CA265_RS25240	0.11	-0.1
6,143,874	+		CA265_RS25240	0.11	-0.7
6,143,876	+		CA265_RS25240	0.11	-0.4
6,143,885	-		CA265_RS25240	0.13	-0.2
6,143,925	-		CA265_RS25240	0.23	-1.7
6,143,925	-		CA265_RS25240	0.23	-0.3
6,143,926	+		CA265_RS25240	0.23	-0.1
6,143,927	-		CA265_RS25240	0.24	-0.2
6,143,932	-		CA265_RS25240	0.25	+0.3
6,143,963	-		CA265_RS25240	0.32	+1.0
6,144,016	+		CA265_RS25240	0.45	-0.6
6,144,076	+		CA265_RS25240	0.60	+0.3
6,144,172	-		CA265_RS25240	0.84	+1.4
6,144,236	+				-0.6
6,144,314	-				+0.5
6,144,318	+				-0.1
6,144,324	-				+0.1
6,144,392	+		CA265_RS25245	0.16	+1.4
6,144,407	+		CA265_RS25245	0.19	+1.7
6,144,408	-		CA265_RS25245	0.19	-0.5
6,144,429	+		CA265_RS25245	0.23	-0.1
6,144,430	-		CA265_RS25245	0.23	-0.3
6,144,430	-		CA265_RS25245	0.23	+1.5
6,144,451	+		CA265_RS25245	0.26	+0.6
6,144,452	-		CA265_RS25245	0.27	+0.2
6,144,461	-		CA265_RS25245	0.28	-1.9
6,144,461	-		CA265_RS25245	0.28	+0.7
6,144,515	+		CA265_RS25245	0.38	-0.1
6,144,516	-		CA265_RS25245	0.38	-0.3
6,144,529	-		CA265_RS25245	0.40	-0.1
6,144,586	-		CA265_RS25245	0.50	-0.6
6,144,607	+		CA265_RS25245	0.54	+0.1