Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS18695

Experiment: R2A with Sisomicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.008 mg/ml
4,647,132	-		CA265_RS18690	0.70	+2.9
4,647,139	+		CA265_RS18690	0.70	-0.9
4,647,140	-		CA265_RS18690	0.70	+0.2
4,647,201	-		CA265_RS18690	0.73	-0.3
4,647,215	+		CA265_RS18690	0.74	-0.3
4,647,234	+		CA265_RS18690	0.75	+1.1
4,647,319	+		CA265_RS18690	0.79	+0.3
4,647,348	+		CA265_RS18690	0.80	+0.5
4,647,348	+		CA265_RS18690	0.80	-0.2
4,647,354	+		CA265_RS18690	0.80	+0.2
4,647,378	-		CA265_RS18690	0.81	+0.3
4,647,402	-		CA265_RS18690	0.82	-1.6
4,647,423	+		CA265_RS18690	0.83	-0.3
4,647,435	-		CA265_RS18690	0.84	-0.8
4,647,435	-		CA265_RS18690	0.84	+0.1
4,647,512	-		CA265_RS18690	0.88	+0.8
4,647,524	+		CA265_RS18690	0.88	+0.1
4,647,645	+				-1.4
4,647,645	+				-0.6
4,647,660	+				-1.1
4,647,660	+				+1.2
4,647,727	+				-1.0
4,647,767	-				+0.5
4,647,770	+				+0.1
4,647,771	-				+0.2
4,647,836	+				-1.5
4,647,952	-				+0.4
4,647,964	+				+0.5
4,648,032	+				+0.4
4,648,032	+				+0.3
4,648,033	-				+0.2
4,648,236	-				+0.3
4,648,288	+				-0.1
4,648,289	-				+0.1
4,648,323	-				-1.6
4,648,373	+		CA265_RS18695	0.12	-1.9
4,648,373	+		CA265_RS18695	0.12	+0.5
4,648,408	-		CA265_RS18695	0.13	+0.9
4,648,421	-		CA265_RS18695	0.13	-0.9
4,648,438	+		CA265_RS18695	0.14	-1.5
4,648,439	-		CA265_RS18695	0.14	-0.9
4,648,439	-		CA265_RS18695	0.14	+2.2
4,648,439	-		CA265_RS18695	0.14	-0.3
4,648,439	-		CA265_RS18695	0.14	-0.8
4,648,474	+				+0.7
4,648,475	-		CA265_RS18695	0.15	-0.6
4,648,496	+		CA265_RS18695	0.16	+0.2
4,648,507	+		CA265_RS18695	0.17	-0.5
4,648,508	-		CA265_RS18695	0.17	+0.2
4,648,508	-		CA265_RS18695	0.17	+0.2
4,648,512	-		CA265_RS18695	0.17	-1.7
4,648,516	+		CA265_RS18695	0.17	-2.2
4,648,516	+		CA265_RS18695	0.17	+0.6
4,648,561	-		CA265_RS18695	0.19	+0.3
4,648,564	+		CA265_RS18695	0.19	-1.1
4,648,565	-		CA265_RS18695	0.19	-0.1
4,648,565	-		CA265_RS18695	0.19	+0.2
4,648,595	+		CA265_RS18695	0.20	+0.0
4,648,619	+		CA265_RS18695	0.21	+0.0
4,648,630	+		CA265_RS18695	0.21	-0.4
4,648,633	-		CA265_RS18695	0.22	+0.3
4,648,637	-		CA265_RS18695	0.22	+1.3
4,648,637	-		CA265_RS18695	0.22	+0.5
4,648,871	+		CA265_RS18695	0.31	-1.3
4,648,954	+		CA265_RS18695	0.34	-1.3
4,648,955	-		CA265_RS18695	0.34	+0.9
4,649,038	+		CA265_RS18695	0.37	+0.1
4,649,039	-		CA265_RS18695	0.37	+0.7
4,649,110	+		CA265_RS18695	0.40	-1.3
4,649,156	+		CA265_RS18695	0.42	+0.6
4,649,156	+		CA265_RS18695	0.42	-1.2
4,649,238	-		CA265_RS18695	0.45	+0.8
4,649,318	+		CA265_RS18695	0.48	+1.1
4,649,328	-		CA265_RS18695	0.48	-1.9
4,649,438	+		CA265_RS18695	0.52	-0.0
4,649,541	-		CA265_RS18695	0.56	+0.5
4,649,578	+		CA265_RS18695	0.58	-0.6
4,649,630	+		CA265_RS18695	0.60	-0.1
4,649,697	-		CA265_RS18695	0.62	+0.8
4,649,698	+		CA265_RS18695	0.62	+0.7
4,649,698	+		CA265_RS18695	0.62	+0.6
4,649,698	+		CA265_RS18695	0.62	+0.1
4,649,699	-		CA265_RS18695	0.62	-0.3
4,649,699	-		CA265_RS18695	0.62	+0.3
4,649,699	-		CA265_RS18695	0.62	-0.3
4,649,700	+		CA265_RS18695	0.62	+0.1
4,649,701	-		CA265_RS18695	0.62	-0.0
4,649,741	+		CA265_RS18695	0.64	-0.2
4,649,742	-		CA265_RS18695	0.64	+1.2
4,649,742	-		CA265_RS18695	0.64	-0.2
4,649,772	+		CA265_RS18695	0.65	-1.3
4,649,773	-		CA265_RS18695	0.65	-0.3
4,649,777	+		CA265_RS18695	0.65	+1.7
4,649,801	+		CA265_RS18695	0.66	+1.1
4,649,801	+		CA265_RS18695	0.66	-0.8
4,649,802	-		CA265_RS18695	0.66	+1.0
4,649,802	-		CA265_RS18695	0.66	-0.3
4,649,918	+		CA265_RS18695	0.71	+0.4
4,649,919	-		CA265_RS18695	0.71	+0.4
4,649,926	-		CA265_RS18695	0.71	+0.9
4,649,943	+		CA265_RS18695	0.72	-0.3
4,649,944	-		CA265_RS18695	0.72	+1.3
4,649,944	-		CA265_RS18695	0.72	+2.7
4,649,975	-		CA265_RS18695	0.73	+0.9
4,650,004	-		CA265_RS18695	0.74	+1.1
4,650,007	+		CA265_RS18695	0.74	-0.4
4,650,168	-		CA265_RS18695	0.80	-0.7
4,650,200	+		CA265_RS18695	0.81	+0.1
4,650,202	+		CA265_RS18695	0.81	+1.1
4,650,279	+		CA265_RS18695	0.84	+0.1
4,650,279	+		CA265_RS18695	0.84	+0.3
4,650,280	-		CA265_RS18695	0.84	-0.4
4,650,284	-		CA265_RS18695	0.85	+1.1
4,650,354	-		CA265_RS18695	0.87	+0.6
4,650,355	+		CA265_RS18695	0.87	-2.8
4,650,355	+		CA265_RS18695	0.87	-0.7
4,650,355	+		CA265_RS18695	0.87	-0.3
4,650,398	+		CA265_RS18695	0.89	+1.9
4,650,398	+		CA265_RS18695	0.89	-0.3
4,650,399	-		CA265_RS18695	0.89	+0.3
4,650,399	-		CA265_RS18695	0.89	-1.7
4,650,417	-		CA265_RS18695	0.90	+3.7
4,650,417	-		CA265_RS18695	0.90	-0.7
4,650,428	-				+0.6
4,650,512	+				-0.2
4,650,599	+				-0.7
4,650,622	+				-0.1
4,650,671	+				+0.3
4,650,675	+				-0.4
4,650,675	+				+0.9
4,650,749	+				-0.1
4,650,749	+				+1.0
4,650,750	-				+0.5
4,650,761	-				+1.1
4,650,796	-				+0.1
4,650,804	+				-0.3
4,650,805	-				+0.6
4,650,805	-				+0.4
4,650,805	-				-0.8
4,650,805	-				+1.0
4,650,862	+				+0.1
4,650,903	-				+0.3
4,650,961	-				-0.9
4,650,961	-				+0.2
4,650,964	+				+1.2
4,650,964	+				+0.7
4,650,966	+				+0.5
4,650,967	-				+0.3
4,651,018	+				+0.7
4,651,018	+				+1.2
4,651,019	-				-1.4
4,651,019	-				-0.7
4,651,127	+				+2.3
4,651,149	+				+0.1
4,651,159	-				+1.6
4,651,254	+				+0.0
4,651,289	-				+1.3
4,651,310	+				-1.0
4,651,517	-		CA265_RS18700	0.17	-0.5
4,651,599	+		CA265_RS18700	0.21	-0.4