Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS17260

Experiment: R2A with Sisomicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.008 mg/ml
4,309,973	+		CA265_RS17255	0.37	-1.1
4,310,024	-		CA265_RS17255	0.40	-1.5
4,310,164	-		CA265_RS17255	0.50	+0.0
4,310,169	+		CA265_RS17255	0.50	+0.5
4,310,243	-		CA265_RS17255	0.56	-0.9
4,310,246	+		CA265_RS17255	0.56	+2.1
4,310,268	-		CA265_RS17255	0.57	+0.1
4,310,291	-		CA265_RS17255	0.59	+0.2
4,310,312	+		CA265_RS17255	0.61	+0.2
4,310,313	-		CA265_RS17255	0.61	-0.1
4,310,437	-		CA265_RS17255	0.70	+0.5
4,310,485	+		CA265_RS17255	0.73	+1.5
4,310,519	-		CA265_RS17255	0.75	+0.9
4,310,610	+		CA265_RS17255	0.82	-1.8
4,310,610	+		CA265_RS17255	0.82	+0.7
4,310,610	+		CA265_RS17255	0.82	-0.6
4,310,716	-		CA265_RS17255	0.89	+0.9
4,310,746	+				+0.8
4,310,746	+				+0.5
4,310,836	-				-0.3
4,310,836	-				-0.6
4,310,865	+				+0.2
4,310,869	+				+0.3
4,310,869	+				+0.4
4,310,948	-				+1.3
4,310,982	-				+0.5
4,310,982	-				+0.6
4,311,126	+		CA265_RS17260	0.11	+0.6
4,311,127	-		CA265_RS17260	0.11	-0.5
4,311,127	-		CA265_RS17260	0.11	+0.7
4,311,187	-		CA265_RS17260	0.15	-0.5
4,311,218	-		CA265_RS17260	0.17	+0.6
4,311,276	+		CA265_RS17260	0.21	+0.2
4,311,281	-		CA265_RS17260	0.21	+0.5
4,311,285	-		CA265_RS17260	0.21	+0.6
4,311,285	-		CA265_RS17260	0.21	-2.3
4,311,305	-		CA265_RS17260	0.23	-1.1
4,311,357	+		CA265_RS17260	0.26	-0.4
4,311,368	-		CA265_RS17260	0.27	+1.2
4,311,382	+		CA265_RS17260	0.28	-0.8
4,311,383	-		CA265_RS17260	0.28	-1.9
4,311,503	+		CA265_RS17260	0.36	+0.2
4,311,504	-		CA265_RS17260	0.36	+0.8
4,311,507	+		CA265_RS17260	0.36	-2.0
4,311,518	+		CA265_RS17260	0.37	+0.0
4,311,639	-		CA265_RS17260	0.45	-1.4
4,311,639	-		CA265_RS17260	0.45	+2.5
4,311,680	+		CA265_RS17260	0.47	+0.5
4,311,717	-		CA265_RS17260	0.50	+0.4
4,311,814	-		CA265_RS17260	0.56	+1.1
4,311,829	-		CA265_RS17260	0.57	+0.0
4,311,885	-		CA265_RS17260	0.61	+0.8
4,311,928	+		CA265_RS17260	0.63	-1.3
4,311,929	-		CA265_RS17260	0.63	+1.2
4,311,929	-		CA265_RS17260	0.63	+0.3
4,311,934	+		CA265_RS17260	0.64	+1.7
4,311,934	+		CA265_RS17260	0.64	+0.2
4,311,934	+		CA265_RS17260	0.64	+0.6
4,311,935	-		CA265_RS17260	0.64	+0.8
4,311,935	-		CA265_RS17260	0.64	+0.2
4,311,970	-		CA265_RS17260	0.66	+1.0
4,311,992	+		CA265_RS17260	0.68	+0.2
4,311,999	-		CA265_RS17260	0.68	+2.0
4,312,071	-		CA265_RS17260	0.73	+0.6
4,312,072	+		CA265_RS17260	0.73	+0.2
4,312,104	-		CA265_RS17260	0.75	+0.7
4,312,107	+		CA265_RS17260	0.75	-0.5
4,312,136	+		CA265_RS17260	0.77	-0.1
4,312,150	+		CA265_RS17260	0.78	-0.1
4,312,193	+		CA265_RS17260	0.81	-0.4
4,312,194	-				+1.7
4,312,194	-		CA265_RS17260	0.81	+0.7
4,312,226	+		CA265_RS17260	0.83	+0.2
4,312,329	+		CA265_RS17260	0.90	+0.6
4,312,375	+				-1.1
4,312,375	+				-1.8
4,312,376	-				-0.8
4,312,392	-				-0.5
4,312,568	+				+0.1
4,312,626	-				-1.8
4,312,639	-				-0.6
4,312,661	+				-0.5
4,312,662	-				-0.5
4,312,662	-				-0.5
4,312,662	-				+0.7
4,312,736	-				-0.7
4,312,764	-				+0.4
4,312,836	+		CA265_RS17265	0.11	+0.3
4,312,837	-		CA265_RS17265	0.11	+0.2
4,312,887	+		CA265_RS17265	0.12	-0.3
4,312,888	-		CA265_RS17265	0.12	-0.5
4,312,891	+		CA265_RS17265	0.12	+0.0
4,312,969	+		CA265_RS17265	0.15	-1.1
4,312,969	+		CA265_RS17265	0.15	+0.1
4,312,993	+		CA265_RS17265	0.16	-1.5
4,312,993	+		CA265_RS17265	0.16	-1.1
4,312,993	+		CA265_RS17265	0.16	+0.7
4,312,994	-		CA265_RS17265	0.16	+0.5
4,313,010	+		CA265_RS17265	0.16	+0.2
4,313,072	-		CA265_RS17265	0.18	+0.6
4,313,134	+		CA265_RS17265	0.20	+0.8
4,313,134	+		CA265_RS17265	0.20	+0.9
4,313,158	-		CA265_RS17265	0.21	-0.1
4,313,189	+		CA265_RS17265	0.22	+0.2
4,313,244	+		CA265_RS17265	0.23	-1.1
4,313,248	-		CA265_RS17265	0.24	+0.2
4,313,350	-		CA265_RS17265	0.27	+0.6
4,313,447	-		CA265_RS17265	0.30	-1.0
4,313,452	-		CA265_RS17265	0.30	+0.8
4,313,467	-		CA265_RS17265	0.30	-1.2
4,313,472	-		CA265_RS17265	0.31	+0.5
4,313,485	+		CA265_RS17265	0.31	+0.5