Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS17250

Experiment: R2A with Sisomicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.008 mg/ml
4,306,757	+		CA265_RS17245	0.24	-0.1
4,306,757	+		CA265_RS17245	0.24	+0.3
4,306,757	+		CA265_RS17245	0.24	-0.5
4,306,767	+		CA265_RS17245	0.25	-0.6
4,306,834	+		CA265_RS17245	0.31	+0.2
4,306,837	+		CA265_RS17245	0.31	-2.0
4,306,838	-		CA265_RS17245	0.31	-0.8
4,306,872	+		CA265_RS17245	0.34	+0.5
4,306,952	+		CA265_RS17245	0.40	+0.1
4,306,998	-		CA265_RS17245	0.44	-0.3
4,307,125	+		CA265_RS17245	0.55	-0.3
4,307,231	-		CA265_RS17245	0.64	+0.2
4,307,269	+		CA265_RS17245	0.67	-0.3
4,307,269	+		CA265_RS17245	0.67	-0.4
4,307,270	+		CA265_RS17245	0.67	-0.5
4,307,276	-		CA265_RS17245	0.67	-0.5
4,307,280	-		CA265_RS17245	0.68	-0.2
4,307,347	+		CA265_RS17245	0.73	-0.9
4,307,370	-		CA265_RS17245	0.75	+0.3
4,307,370	-		CA265_RS17245	0.75	-1.0
4,307,457	+		CA265_RS17245	0.82	-0.2
4,307,458	-		CA265_RS17245	0.83	-0.3
4,307,469	-		CA265_RS17245	0.83	+0.3
4,307,490	-		CA265_RS17245	0.85	+0.8
4,307,549	-				-1.0
4,307,549	-				+0.8
4,307,568	+				+0.1
4,307,568	+				-0.1
4,307,569	-				-0.1
4,307,569	-				+0.7
4,307,594	+				+0.2
4,307,594	+				+0.2
4,307,595	-				-1.0
4,307,649	-				+0.4
4,307,767	-				-0.6
4,307,810	+				-1.8
4,307,862	-		CA265_RS17250	0.10	+0.0
4,307,862	-		CA265_RS17250	0.10	-1.3
4,307,896	-		CA265_RS17250	0.12	+0.5
4,307,908	+		CA265_RS17250	0.13	-0.9
4,307,908	+		CA265_RS17250	0.13	-1.0
4,307,909	-		CA265_RS17250	0.13	-0.2
4,307,909	-		CA265_RS17250	0.13	-0.9
4,307,931	+		CA265_RS17250	0.14	-1.2
4,307,931	+		CA265_RS17250	0.14	-0.7
4,308,009	-		CA265_RS17250	0.19	+0.7
4,308,009	-		CA265_RS17250	0.19	+3.0
4,308,071	+		CA265_RS17250	0.22	-1.8
4,308,101	-		CA265_RS17250	0.24	+0.8
4,308,132	+		CA265_RS17250	0.26	+0.0
4,308,140	-		CA265_RS17250	0.26	-0.6
4,308,145	-		CA265_RS17250	0.26	-0.1
4,308,195	-		CA265_RS17250	0.29	-0.1
4,308,286	+		CA265_RS17250	0.34	-1.0
4,308,309	-		CA265_RS17250	0.36	+0.2
4,308,347	-		CA265_RS17250	0.38	-2.6
4,308,435	+		CA265_RS17250	0.43	-1.5
4,308,435	+		CA265_RS17250	0.43	-0.2
4,308,524	+		CA265_RS17250	0.48	-0.7
4,308,648	-		CA265_RS17250	0.55	-0.0
4,308,770	-		CA265_RS17250	0.62	+0.3
4,308,794	-		CA265_RS17250	0.63	+1.3
4,308,806	-		CA265_RS17250	0.64	+0.7
4,308,806	-		CA265_RS17250	0.64	+0.9
4,308,882	+		CA265_RS17250	0.68	+0.8
4,308,883	-		CA265_RS17250	0.69	+1.1
4,308,886	+		CA265_RS17250	0.69	+0.2
4,309,034	+		CA265_RS17250	0.77	-0.1
4,309,062	+		CA265_RS17250	0.79	+0.0
4,309,073	+		CA265_RS17250	0.79	-1.2
4,309,074	-		CA265_RS17250	0.79	+1.5
4,309,075	+		CA265_RS17250	0.80	-1.9
4,309,109	+				+0.7
4,309,175	-		CA265_RS17250	0.85	-0.1
4,309,175	-		CA265_RS17250	0.85	-0.1
4,309,212	+		CA265_RS17250	0.87	-0.1
4,309,262	+				-1.2
4,309,262	+				-0.7
4,309,262	+				-0.3
4,309,265	-				-0.1
4,309,265	-				+0.1
4,309,343	+				-1.5
4,309,406	+				-0.6
4,309,407	-				+0.2
4,309,409	-				-0.9
4,309,410	+				-0.0
4,309,411	-				+0.3
4,309,460	+				+0.8
4,309,469	+				-0.5
4,309,536	+				-1.5
4,309,536	+				+0.5
4,309,537	-				+0.4
4,309,554	+				+0.5
4,309,578	+				-0.6
4,309,630	-		CA265_RS17255	0.12	-0.4
4,309,685	+		CA265_RS17255	0.16	-0.3
4,309,686	-		CA265_RS17255	0.16	-0.7
4,309,703	+		CA265_RS17255	0.17	+0.3
4,309,703	+		CA265_RS17255	0.17	+0.7
4,309,761	+		CA265_RS17255	0.21	-0.7
4,309,762	-		CA265_RS17255	0.22	-0.9
4,309,770	+		CA265_RS17255	0.22	+0.2
4,309,822	-		CA265_RS17255	0.26	-1.8
4,309,822	-		CA265_RS17255	0.26	+0.7
4,309,840	+		CA265_RS17255	0.27	-1.3
4,309,840	+		CA265_RS17255	0.27	-0.5
4,309,917	+		CA265_RS17255	0.33	+0.8
4,309,917	+		CA265_RS17255	0.33	+0.4
4,309,918	-		CA265_RS17255	0.33	+0.5
4,309,951	+		CA265_RS17255	0.35	-0.2
4,309,952	-		CA265_RS17255	0.35	-0.3
4,309,952	-		CA265_RS17255	0.35	+0.5
4,309,973	+		CA265_RS17255	0.37	-1.1
4,310,024	-		CA265_RS17255	0.40	-1.5
4,310,164	-		CA265_RS17255	0.50	+0.0
4,310,169	+		CA265_RS17255	0.50	+0.5
4,310,243	-		CA265_RS17255	0.56	-0.9
4,310,246	+		CA265_RS17255	0.56	+2.1
4,310,268	-		CA265_RS17255	0.57	+0.1
4,310,291	-		CA265_RS17255	0.59	+0.2
4,310,312	+		CA265_RS17255	0.61	+0.2
4,310,313	-		CA265_RS17255	0.61	-0.1