Experiment: R2A with Sisomicin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS15735 and CA265_RS15740 are separated by 156 nucleotides CA265_RS15740 and CA265_RS15745 are separated by 182 nucleotides CA265_RS15745 and CA265_RS15750 are separated by 16 nucleotides CA265_RS15750 and CA265_RS15755 are separated by 190 nucleotides
CA265_RS15735: CA265_RS15735 - GTPase Obg, at 3,965,437 to 3,966,432
_RS15735
CA265_RS15740: CA265_RS15740 - adenylate kinase, at 3,966,589 to 3,967,164
_RS15740
CA265_RS15745: CA265_RS15745 - hypothetical protein, at 3,967,347 to 3,967,541
_RS15745
CA265_RS15750: CA265_RS15750 - tRNA-Arg, at 3,967,558 to 3,967,631
_RS15750
CA265_RS15755: CA265_RS15755 - hypothetical protein, at 3,967,822 to 3,968,931
_RS15755
Position (kb)
3967
3968 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3966.515 kb on - strand at 3966.556 kb on - strand at 3966.577 kb on - strand at 3966.577 kb on - strand at 3966.598 kb on - strand at 3966.611 kb on - strand at 3967.287 kb on - strand at 3967.355 kb on + strand at 3967.718 kb on + strand at 3967.785 kb on + strand at 3967.872 kb on - strand at 3967.872 kb on - strand at 3967.886 kb on + strand at 3967.941 kb on + strand, within CA265_RS15755 at 3967.942 kb on - strand, within CA265_RS15755 at 3967.951 kb on - strand at 3967.961 kb on - strand, within CA265_RS15755 at 3967.964 kb on + strand, within CA265_RS15755 at 3967.969 kb on + strand, within CA265_RS15755 at 3967.969 kb on + strand, within CA265_RS15755 at 3968.082 kb on - strand, within CA265_RS15755 at 3968.154 kb on - strand, within CA265_RS15755 at 3968.163 kb on + strand, within CA265_RS15755 at 3968.202 kb on - strand, within CA265_RS15755 at 3968.236 kb on + strand, within CA265_RS15755 at 3968.248 kb on + strand, within CA265_RS15755 at 3968.253 kb on - strand, within CA265_RS15755 at 3968.350 kb on + strand, within CA265_RS15755 at 3968.370 kb on + strand, within CA265_RS15755 at 3968.424 kb on + strand, within CA265_RS15755 at 3968.425 kb on - strand, within CA265_RS15755 at 3968.461 kb on + strand, within CA265_RS15755 at 3968.470 kb on - strand, within CA265_RS15755 at 3968.485 kb on - strand, within CA265_RS15755
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Sisomicin 0.008 mg/ml remove 3,966,515 - -3.1 3,966,556 - -1.8 3,966,577 - +0.3 3,966,577 - -1.1 3,966,598 - +0.3 3,966,611 - +0.4 3,967,287 - -0.3 3,967,355 + -0.9 3,967,718 + +0.1 3,967,785 + -0.3 3,967,872 - +1.9 3,967,872 - +1.5 3,967,886 + +0.1 3,967,941 + CA265_RS15755 0.11 -0.8 3,967,942 - CA265_RS15755 0.11 +1.3 3,967,951 - +0.7 3,967,961 - CA265_RS15755 0.13 -0.2 3,967,964 + CA265_RS15755 0.13 -0.4 3,967,969 + CA265_RS15755 0.13 -0.5 3,967,969 + CA265_RS15755 0.13 +0.3 3,968,082 - CA265_RS15755 0.23 +0.2 3,968,154 - CA265_RS15755 0.30 +0.2 3,968,163 + CA265_RS15755 0.31 -0.9 3,968,202 - CA265_RS15755 0.34 -0.1 3,968,236 + CA265_RS15755 0.37 -0.8 3,968,248 + CA265_RS15755 0.38 -2.3 3,968,253 - CA265_RS15755 0.39 -0.7 3,968,350 + CA265_RS15755 0.48 -0.3 3,968,370 + CA265_RS15755 0.49 -0.2 3,968,424 + CA265_RS15755 0.54 +1.2 3,968,425 - CA265_RS15755 0.54 -0.1 3,968,461 + CA265_RS15755 0.58 +0.5 3,968,470 - CA265_RS15755 0.58 +0.3 3,968,485 - CA265_RS15755 0.60 +0.6
Or see this region's nucleotide sequence