Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS13030

Experiment: R2A with Sisomicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.008 mg/ml
3,242,427	-		CA265_RS13025	0.36	-4.1
3,242,436	-		CA265_RS13025	0.37	-3.0
3,242,458	-		CA265_RS13025	0.39	-1.1
3,242,480	+		CA265_RS13025	0.41	-2.7
3,242,505	-		CA265_RS13025	0.43	-5.0
3,242,555	+		CA265_RS13025	0.48	-3.8
3,242,556	-		CA265_RS13025	0.48	-2.5
3,242,556	-		CA265_RS13025	0.48	-1.1
3,242,557	+		CA265_RS13025	0.48	-3.6
3,242,557	+		CA265_RS13025	0.48	-2.6
3,242,557	+		CA265_RS13025	0.48	-1.1
3,242,557	+		CA265_RS13025	0.48	-1.8
3,242,558	-		CA265_RS13025	0.48	-0.4
3,242,654	-		CA265_RS13025	0.57	-2.3
3,242,705	+		CA265_RS13025	0.61	-1.8
3,242,768	-		CA265_RS13025	0.67	-1.0
3,242,841	-		CA265_RS13025	0.74	-3.7
3,242,844	+		CA265_RS13025	0.74	-2.9
3,242,894	+		CA265_RS13025	0.78	-1.3
3,242,953	-		CA265_RS13025	0.84	-3.0
3,242,955	+		CA265_RS13025	0.84	-2.9
3,242,960	+		CA265_RS13025	0.84	-2.7
3,242,961	-		CA265_RS13025	0.84	-0.6
3,242,969	-		CA265_RS13025	0.85	-2.0
3,243,009	+		CA265_RS13025	0.89	-2.4
3,243,010	-		CA265_RS13025	0.89	-3.1
3,243,015	+		CA265_RS13025	0.89	-3.1
3,243,016	-		CA265_RS13025	0.89	-2.0
3,243,054	+				-2.3
3,243,165	-				-3.3
3,243,170	-				+1.2
3,243,202	-				-0.6
3,243,238	+				-4.1
3,243,238	+				-3.2
3,243,291	-				-0.3
3,243,293	-				+0.5
3,243,327	+				-2.7
3,243,379	+				-2.5
3,243,403	+				-1.1
3,243,425	+				-2.1
3,243,543	-		CA265_RS13030	0.14	-1.8
3,243,543	-		CA265_RS13030	0.14	+1.2
3,243,544	-		CA265_RS13030	0.14	-2.8
3,243,562	+		CA265_RS13030	0.15	-1.4
3,243,573	+		CA265_RS13030	0.16	-2.3
3,243,574	-		CA265_RS13030	0.16	+0.1
3,243,581	-		CA265_RS13030	0.17	-2.6
3,243,684	+		CA265_RS13030	0.26	-3.2
3,243,725	+		CA265_RS13030	0.30	-2.5
3,243,775	-		CA265_RS13030	0.34	-1.1
3,243,784	-		CA265_RS13030	0.35	+0.5
3,243,833	+		CA265_RS13030	0.39	-3.4
3,243,852	+		CA265_RS13030	0.41	-2.2
3,243,859	-		CA265_RS13030	0.41	-2.0
3,243,859	-		CA265_RS13030	0.41	-1.3
3,243,859	-		CA265_RS13030	0.41	-0.8
3,243,859	-		CA265_RS13030	0.41	+0.5
3,243,980	-		CA265_RS13030	0.52	+0.3
3,243,980	-		CA265_RS13030	0.52	-0.5
3,243,982	-		CA265_RS13030	0.52	-0.7
3,243,992	-		CA265_RS13030	0.53	-1.8
3,243,992	-		CA265_RS13030	0.53	-0.1
3,244,014	-		CA265_RS13030	0.55	-1.1
3,244,083	+		CA265_RS13030	0.61	-1.6
3,244,084	-		CA265_RS13030	0.61	-1.9
3,244,260	-		CA265_RS13030	0.77	-1.6
3,244,262	+		CA265_RS13030	0.77	-2.3
3,244,350	+		CA265_RS13030	0.85	-0.1
3,244,423	-				-0.9
3,244,518	+				-0.4