Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS10890

Experiment: R2A with Sisomicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.008 mg/ml
2,680,527	+				+0.8
2,680,550	-				-0.1
2,680,633	-		CA265_RS10885	0.19	+0.5
2,680,635	+		CA265_RS10885	0.20	-1.7
2,680,648	+		CA265_RS10885	0.22	+0.1
2,680,712	+		CA265_RS10885	0.35	+0.9
2,680,716	+		CA265_RS10885	0.35	-0.3
2,680,716	+		CA265_RS10885	0.35	-2.1
2,680,804	+		CA265_RS10885	0.52	-1.2
2,680,912	+		CA265_RS10885	0.73	-0.2
2,680,912	+		CA265_RS10885	0.73	-0.7
2,680,914	+		CA265_RS10885	0.74	+1.0
2,680,914	+		CA265_RS10885	0.74	-0.1
2,680,914	+		CA265_RS10885	0.74	+1.4
2,680,914	+		CA265_RS10885	0.74	-0.8
2,680,915	-		CA265_RS10885	0.74	-1.8
2,680,915	-		CA265_RS10885	0.74	+0.1
2,680,915	-		CA265_RS10885	0.74	+0.4
2,680,948	+		CA265_RS10885	0.80	-0.2
2,681,033	+				-1.0
2,681,034	-				-0.6
2,681,132	+				-1.6
2,681,161	+				-0.4
2,681,169	+				+0.1
2,681,204	+				+0.5
2,681,225	-				+0.1
2,681,225	-				+0.9
2,681,225	-				+0.2
2,681,225	-				+0.3
2,681,238	+				-0.8
2,681,239	-				-0.4
2,681,265	-				-0.9
2,681,325	+		CA265_RS10890	0.11	-0.8
2,681,522	+		CA265_RS10890	0.40	-0.0
2,681,533	+		CA265_RS10890	0.41	+0.9
2,681,534	-		CA265_RS10890	0.42	-0.1
2,681,535	+		CA265_RS10890	0.42	+0.1
2,681,535	+		CA265_RS10890	0.42	-0.0
2,681,565	+		CA265_RS10890	0.46	-0.7
2,681,589	-		CA265_RS10890	0.50	+0.6
2,681,612	+		CA265_RS10890	0.53	+0.7
2,681,612	+		CA265_RS10890	0.53	-0.9
2,681,615	+		CA265_RS10890	0.53	-2.2
2,681,622	-		CA265_RS10890	0.54	+0.8
2,681,730	+		CA265_RS10890	0.70	-1.5
2,681,735	+		CA265_RS10890	0.71	-0.5
2,681,745	-		CA265_RS10890	0.73	-0.7
2,681,755	+		CA265_RS10890	0.74	-1.4
2,681,756	-		CA265_RS10890	0.74	-0.6
2,681,756	-		CA265_RS10890	0.74	+0.2
2,681,836	+		CA265_RS10890	0.86	+0.6
2,681,837	-		CA265_RS10890	0.86	+0.4
2,681,885	+				+0.7
2,681,886	-				-1.7
2,681,945	+				+0.2
2,681,956	+				+0.5
2,682,008	+		CA265_RS10895	0.12	+0.1
2,682,020	-		CA265_RS10895	0.13	-1.0
2,682,061	-		CA265_RS10895	0.20	+0.9
2,682,077	+		CA265_RS10895	0.22	+0.7
2,682,078	-		CA265_RS10895	0.22	-0.0
2,682,083	+		CA265_RS10895	0.23	-0.1
2,682,091	+		CA265_RS10895	0.24	+0.8
2,682,142	+		CA265_RS10895	0.32	-0.6
2,682,181	+		CA265_RS10895	0.38	+2.0
2,682,199	+		CA265_RS10895	0.40	-0.1
2,682,248	-		CA265_RS10895	0.48	-0.1
2,682,257	+		CA265_RS10895	0.49	+0.0
2,682,288	-		CA265_RS10895	0.54	-1.6
2,682,307	-		CA265_RS10895	0.56	+1.3
2,682,416	+		CA265_RS10895	0.73	-0.2
2,682,522	-		CA265_RS10895	0.89	-0.0
2,682,529	-		CA265_RS10895	0.90	+0.1
2,682,557	+				-0.6
2,682,621	-				+0.1
2,682,656	+				-1.1
2,682,708	+				-0.7
2,682,730	+				-0.5
2,682,761	+				-1.0
2,682,761	+				-3.0
2,682,790	-				+0.1
2,682,794	-				-0.4
2,682,879	+				-0.4
2,682,880	-				-0.5