Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS09310

Experiment: R2A with Sisomicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.008 mg/ml
2,314,801	+				+0.6
2,314,930	-		CA265_RS09305	0.17	-0.6
2,314,958	-		CA265_RS09305	0.20	-0.3
2,315,037	-		CA265_RS09305	0.29	+1.1
2,315,091	-		CA265_RS09305	0.35	+0.2
2,315,095	-		CA265_RS09305	0.36	-0.1
2,315,110	-		CA265_RS09305	0.37	-3.0
2,315,110	-		CA265_RS09305	0.37	-0.4
2,315,166	-		CA265_RS09305	0.43	-1.1
2,315,213	+		CA265_RS09305	0.49	-1.1
2,315,240	+				-0.0
2,315,246	+		CA265_RS09305	0.52	-0.2
2,315,246	+		CA265_RS09305	0.52	+0.1
2,315,366	+		CA265_RS09305	0.66	-0.8
2,315,392	+		CA265_RS09305	0.68	-0.4
2,315,393	-		CA265_RS09305	0.69	-0.0
2,315,393	-		CA265_RS09305	0.69	-0.7
2,315,405	+		CA265_RS09305	0.70	-0.3
2,315,417	+		CA265_RS09305	0.71	+1.3
2,315,439	+		CA265_RS09305	0.74	-1.5
2,315,458	+		CA265_RS09305	0.76	-2.6
2,315,459	-		CA265_RS09305	0.76	-0.3
2,315,462	+		CA265_RS09305	0.76	-0.3
2,315,471	+		CA265_RS09305	0.77	-0.0
2,315,472	-		CA265_RS09305	0.77	-0.9
2,315,491	-		CA265_RS09305	0.79	-0.4
2,315,544	-		CA265_RS09305	0.85	+0.7
2,315,544	-		CA265_RS09305	0.85	-0.1
2,315,546	+		CA265_RS09305	0.85	-1.8
2,315,589	+				+0.4
2,315,622	+				-1.7
2,315,628	-				-1.2
2,315,694	+				-0.5
2,315,718	-				-0.1
2,315,734	-				-0.0
2,315,760	-				-0.7
2,315,833	+		CA265_RS09310	0.17	-0.3
2,315,916	-		CA265_RS09310	0.29	+0.1
2,315,934	-		CA265_RS09310	0.32	+0.0
2,315,949	-		CA265_RS09310	0.34	+0.8
2,316,071	+		CA265_RS09310	0.52	-2.1
2,316,072	-		CA265_RS09310	0.52	+0.9
2,316,139	+		CA265_RS09310	0.62	-1.5
2,316,146	+		CA265_RS09310	0.63	-0.6
2,316,146	+		CA265_RS09310	0.63	-0.3
2,316,176	-		CA265_RS09310	0.67	+0.5
2,316,199	+		CA265_RS09310	0.70	+0.3
2,316,199	+		CA265_RS09310	0.70	-2.0
2,316,353	-				+0.7
2,316,432	+				+0.3
2,316,433	-				+2.4
2,316,439	+				-0.9
2,316,439	+				-0.5
2,316,440	-				+0.7
2,316,440	-				-0.6
2,316,453	+				-0.5
2,316,506	+				-0.2
2,316,506	+				+1.3
2,316,507	-				-0.5
2,316,507	-				-0.4
2,316,509	-				-0.4
2,316,526	+		CA265_RS09315	0.12	+0.7
2,316,527	-		CA265_RS09315	0.12	-0.9
2,316,537	+		CA265_RS09315	0.13	-0.6
2,316,542	-		CA265_RS09315	0.14	+1.0
2,316,634	-		CA265_RS09315	0.26	-0.2
2,316,788	-		CA265_RS09315	0.47	-0.4
2,316,815	-		CA265_RS09315	0.51	-0.4
2,316,864	+		CA265_RS09315	0.58	+0.1
2,316,865	-		CA265_RS09315	0.58	+0.3
2,316,929	-		CA265_RS09315	0.67	+0.4
2,316,929	-		CA265_RS09315	0.67	+0.5
2,316,933	-		CA265_RS09315	0.67	+0.1
2,316,958	+		CA265_RS09315	0.70	+0.3
2,316,962	-		CA265_RS09315	0.71	+1.6
2,317,043	-		CA265_RS09315	0.82	+0.4
2,317,075	+		CA265_RS09315	0.86	+1.6
2,317,090	+		CA265_RS09315	0.88	-0.7
2,317,090	+		CA265_RS09315	0.88	+0.6
2,317,168	+				+0.2
2,317,169	-				-1.3
2,317,172	+				-0.5
2,317,173	-				+0.2
2,317,193	+				-0.2
2,317,194	-				-0.1
2,317,210	-				-0.5
2,317,213	+				-0.6
2,317,214	-				+1.7
2,317,325	-		CA265_RS09320	0.52	-0.3
2,317,325	-		CA265_RS09320	0.52	-0.2
2,317,396	+		CA265_RS09320	0.89	-0.0