Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS08605

Experiment: R2A with Sisomicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.008 mg/ml
2,157,912	-		CA265_RS08600	0.61	-0.3
2,157,937	-		CA265_RS08600	0.62	-0.3
2,157,956	+		CA265_RS08600	0.63	-0.1
2,158,011	+		CA265_RS08600	0.65	+0.8
2,158,011	+		CA265_RS08600	0.65	-0.4
2,158,066	+		CA265_RS08600	0.68	+0.7
2,158,069	-		CA265_RS08600	0.68	+1.0
2,158,112	+		CA265_RS08600	0.70	-0.2
2,158,153	+		CA265_RS08600	0.72	+0.9
2,158,480	+		CA265_RS08600	0.86	+1.3
2,158,481	-		CA265_RS08600	0.86	-0.4
2,158,485	-		CA265_RS08600	0.87	-0.3
2,158,487	-		CA265_RS08600	0.87	+0.1
2,158,626	+				-2.1
2,158,674	+				-1.5
2,158,696	+				-0.1
2,158,771	+				+0.7
2,158,814	+				+0.4
2,158,869	+				+0.0
2,158,869	+				-1.0
2,158,898	-				+0.4
2,158,910	+				-0.6
2,158,960	+				+1.1
2,158,961	-				+1.0
2,159,078	-		CA265_RS08605	0.25	-0.4
2,159,119	+		CA265_RS08605	0.30	+0.6
2,159,150	-		CA265_RS08605	0.34	-0.8
2,159,154	-		CA265_RS08605	0.34	-0.0
2,159,196	+		CA265_RS08605	0.40	+1.9
2,159,196	+		CA265_RS08605	0.40	-1.2
2,159,197	-		CA265_RS08605	0.40	-0.5
2,159,198	+		CA265_RS08605	0.40	-0.4
2,159,238	+		CA265_RS08605	0.45	+2.0
2,159,238	+		CA265_RS08605	0.45	+1.1
2,159,241	+		CA265_RS08605	0.45	+0.2
2,159,336	+		CA265_RS08605	0.57	+0.7
2,159,336	+		CA265_RS08605	0.57	+0.7
2,159,336	+		CA265_RS08605	0.57	+1.0
2,159,358	-		CA265_RS08605	0.60	-1.6
2,159,377	+		CA265_RS08605	0.62	-0.5
2,159,409	+		CA265_RS08605	0.67	+0.6
2,159,410	-		CA265_RS08605	0.67	-0.8
2,159,582	-		CA265_RS08605	0.88	-0.7
2,159,638	-				-1.3
2,159,647	+				+2.2
2,159,648	-				+0.6
2,159,648	-				+0.6
2,159,651	+				+1.1
2,159,708	+				-0.3
2,159,708	+				+0.6
2,159,731	+				+0.4
2,159,751	+				+0.5
2,159,771	+				+0.2
2,159,840	-				-0.7
2,160,026	+		CA265_RS08610	0.27	+0.5
2,160,050	+		CA265_RS08610	0.29	+1.0
2,160,082	+		CA265_RS08610	0.32	+1.4
2,160,083	-		CA265_RS08610	0.32	-0.6
2,160,137	-		CA265_RS08610	0.38	-0.1
2,160,238	+		CA265_RS08610	0.47	+1.4
2,160,239	-		CA265_RS08610	0.48	-0.5
2,160,273	-		CA265_RS08610	0.51	+0.2
2,160,446	-		CA265_RS08610	0.68	-1.2
2,160,446	-		CA265_RS08610	0.68	-0.8
2,160,479	+		CA265_RS08610	0.71	+0.8
2,160,488	-		CA265_RS08610	0.72	-0.0
2,160,494	+		CA265_RS08610	0.73	+0.3
2,160,544	+		CA265_RS08610	0.77	-1.1
2,160,628	+		CA265_RS08610	0.86	-1.5
2,160,629	-		CA265_RS08610	0.86	+0.1
2,160,670	-		CA265_RS08610	0.90	-0.6
2,160,670	-		CA265_RS08610	0.90	+0.7